Pre_GI: BLASTN Hits

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Query: NC_009092:3239500 Shewanella loihica PV-4, complete genome

Start: 3239500, End: 3261290, Length: 21791

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009092:19352811935281195928524005Shewanella loihica PV-4, complete genome2e-152547BLASTN svgBLASTP svg
NC_008321:32320003232000325409922100Shewanella sp. MR-4, complete genome4e-76293BLASTN svgBLASTP svg
NC_009092:36824133682413370194319531Shewanella loihica PV-4, complete genome7e-50206BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome2e-47198BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome4e-39170BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome6e-35157BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome1e-32149BLASTN svgBLASTP svg
NC_014924:936158*93615896352527368Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome3e-27131BLASTN svgBLASTP svg
NC_008321:21900002190000221007020071Shewanella sp. MR-4, complete genome3e-27131BLASTN svgBLASTP svg
NC_003919:31133433113343313961926277Xanthomonas axonopodis pv. citri str. 306, complete genome3e-24121BLASTN svgBLASTP svg
NC_007508:31836313183631322068237052Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-20109BLASTN svgBLASTP svg
NC_009092:13053551305355132893623582Shewanella loihica PV-4, complete genome2e-19105BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007705:3429493*3429493345339023898Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009092:26441642644164266929125128Shewanella loihica PV-4, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010717:35649553564955358709922145Xanthomonas oryzae pv. oryzae PXO99A, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_020209:945000*94500096809923100Pseudomonas poae RE*1-1-14, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_009092:37830003783000380209919100Shewanella loihica PV-4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008577:26042812604281264200637726Shewanella sp. ANA-3 chromosome 1, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_010688:19080121908012196474456733Xanthomonas campestris pv. campestris, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008577:25113262511326253076419439Shewanella sp. ANA-3 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008577:46114314611431464087329443Shewanella sp. ANA-3 chromosome 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009831:3092126*3092126311332621201Shewanella sediminis HAW-EB3, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009138:46726846726851435347086Herminiimonas arsenicoxydans, complete genome3e-0661.9BLASTN svgBLASTP svg