Query: NC_009092:3239500 Shewanella loihica PV-4, complete genome
Start: 3239500, End: 3261290, Length: 21791
Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009092:1935281 | 1935281 | 1959285 | 24005 | Shewanella loihica PV-4, complete genome | 2e-152 | 547 | BLASTN svg | BLASTP svg |
NC_008321:3232000 | 3232000 | 3254099 | 22100 | Shewanella sp. MR-4, complete genome | 4e-76 | 293 | BLASTN svg | BLASTP svg |
NC_009092:3682413 | 3682413 | 3701943 | 19531 | Shewanella loihica PV-4, complete genome | 7e-50 | 206 | BLASTN svg | BLASTP svg |
NC_009092:1504363 | 1504363 | 1580103 | 75741 | Shewanella loihica PV-4, complete genome | 2e-47 | 198 | BLASTN svg | BLASTP svg |
NC_009092:3057319* | 3057319 | 3084097 | 26779 | Shewanella loihica PV-4, complete genome | 4e-39 | 170 | BLASTN svg | BLASTP svg |
NC_009092:3732390 | 3732390 | 3755532 | 23143 | Shewanella loihica PV-4, complete genome | 6e-35 | 157 | BLASTN svg | BLASTP svg |
NC_009439:442890 | 442890 | 489008 | 46119 | Pseudomonas mendocina ymp, complete genome | 1e-32 | 149 | BLASTN svg | BLASTP svg |
NC_014924:936158* | 936158 | 963525 | 27368 | Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
NC_009092:1047500* | 1047500 | 1072729 | 25230 | Shewanella loihica PV-4, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
NC_008321:2190000 | 2190000 | 2210070 | 20071 | Shewanella sp. MR-4, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
NC_003919:3113343 | 3113343 | 3139619 | 26277 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
NC_007508:3183631 | 3183631 | 3220682 | 37052 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_009092:1305355 | 1305355 | 1328936 | 23582 | Shewanella loihica PV-4, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_006834:3422985* | 3422985 | 3444222 | 21238 | Xanthomonas oryzae pv. oryzae KACC10331, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_007705:3429493* | 3429493 | 3453390 | 23898 | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_009092:2644164 | 2644164 | 2669291 | 25128 | Shewanella loihica PV-4, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_010717:3564955 | 3564955 | 3587099 | 22145 | Xanthomonas oryzae pv. oryzae PXO99A, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_020209:945000* | 945000 | 968099 | 23100 | Pseudomonas poae RE*1-1-14, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_009092:3783000 | 3783000 | 3802099 | 19100 | Shewanella loihica PV-4, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_008577:2604281 | 2604281 | 2642006 | 37726 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010688:1908012 | 1908012 | 1964744 | 56733 | Xanthomonas campestris pv. campestris, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009092:2529518 | 2529518 | 2552506 | 22989 | Shewanella loihica PV-4, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008577:2511326 | 2511326 | 2530764 | 19439 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008577:4611431 | 4611431 | 4640873 | 29443 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008573:195317 | 195317 | 247450 | 52134 | Shewanella sp. ANA-3 plasmid 1, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009997:2635025 | 2635025 | 2666893 | 31869 | Shewanella baltica OS195, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009831:3092126* | 3092126 | 3113326 | 21201 | Shewanella sediminis HAW-EB3, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009138:467268 | 467268 | 514353 | 47086 | Herminiimonas arsenicoxydans, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |