Pre_GI: BLASTN Hits

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Query: NC_009092:1935281 Shewanella loihica PV-4, complete genome

Start: 1935281, End: 1959285, Length: 24005

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008570:54673654673656738120646Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009348:40111604011160403161120452Aeromonas salmonicida subsp. salmonicida A449, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018678:21401822140182216322323042Alteromonas macleodii str. 'English Channel 673' chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_014500:48837944883794490328419491Dickeya dadantii 3937 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009138:46726846726851435347086Herminiimonas arsenicoxydans, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome1e-51212BLASTN svgBLASTP svg
NC_009092:13053551305355132893623582Shewanella loihica PV-4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome5e-51210BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009092:37830003783000380209919100Shewanella loihica PV-4, complete genome6e-26127BLASTN svgBLASTP svg
NC_009092:26441642644164266929125128Shewanella loihica PV-4, complete genome1e-23119BLASTN svgBLASTP svg
NC_009092:32395003239500326129021791Shewanella loihica PV-4, complete genome2e-152547BLASTN svgBLASTP svg
NC_009092:26177826177828459922822Shewanella loihica PV-4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome6e-60240BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome3e-58234BLASTN svgBLASTP svg
NC_008577:26042812604281264200637726Shewanella sp. ANA-3 chromosome 1, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_008577:25113262511326253076419439Shewanella sp. ANA-3 chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_008577:2910383*2910383292929118909Shewanella sp. ANA-3 chromosome 1, complete sequence8e-1693.7BLASTN svgBLASTP svg
NC_008577:46114314611431464087329443Shewanella sp. ANA-3 chromosome 1, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_008321:32320003232000325409922100Shewanella sp. MR-4, complete genome7e-44186BLASTN svgBLASTP svg
NC_008321:21900002190000221007020071Shewanella sp. MR-4, complete genome3e-34155BLASTN svgBLASTP svg
NC_018868:32293813229381325457825198Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_018868:3036205*3036205307547539271Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-22115BLASTN svgBLASTP svg