Pre_GI: BLASTN Hits

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Query: NC_009092:1874888 Shewanella loihica PV-4, complete genome

Start: 1874888, End: 1914202, Length: 39315

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011083:82465982465985295528297Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-54222BLASTN svgBLASTP svg
NC_011080:78085078085080915728308Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-54222BLASTN svgBLASTP svg
NC_003197:77623877623880454628309Salmonella typhimurium LT2, complete genome2e-54222BLASTN svgBLASTP svg
NC_010102:23228662322866235445731592Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-52214BLASTN svgBLASTP svg
NC_006511:20900582090058211818728130Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-49206BLASTN svgBLASTP svg
NC_004631:22058212205821223319827378Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-44188BLASTN svgBLASTP svg
NC_003198:75177975177977932827550Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-44188BLASTN svgBLASTP svg
NC_008700:1627401*1627401165612228722Shewanella amazonensis SB2B, complete genome1e-43186BLASTN svgBLASTP svg
NC_009434:20065002006500203099424495Pseudomonas stutzeri A1501, complete genome3e-32149BLASTN svgBLASTP svg
NC_015740:18453701845370186638521016Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-32149BLASTN svgBLASTP svg
NC_012779:2755338*2755338278000524668Edwardsiella ictaluri 93-146, complete genome6e-30141BLASTN svgBLASTP svg
NC_007963:1370903*1370903139119320291Chromohalobacter salexigens DSM 3043, complete genome6e-30141BLASTN svgBLASTP svg
NC_010634:13423931342393136733024938Yersinia pseudotuberculosis PB1/+, complete genome2e-29139BLASTN svgBLASTP svg
NC_010159:14179931417993144109923107Yersinia pestis Angola, complete genome2e-29139BLASTN svgBLASTP svg
NC_008150:65089965089967359922701Yersinia pestis Antiqua, complete genome2e-29139BLASTN svgBLASTP svg
NC_003143:12331281233128125981426687Yersinia pestis CO92, complete genome2e-29139BLASTN svgBLASTP svg
NC_014006:850763*85076390963758875Sphingobium japonicum UT26S chromosome 1, complete genome4e-28135BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome1e-18103BLASTN svgBLASTP svg
NC_010688:1192410*1192410126259970190Xanthomonas campestris pv. campestris, complete genome1e-18103BLASTN svgBLASTP svg
NC_007912:26975812697581271653118951Saccharophagus degradans 2-40, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_013722:2810721*2810721284465133931Xanthomonas albilineans, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015563:47734154773415479788824474Delftia sp. Cs1-4 chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_008149:3251196*3251196327595124756Yersinia pestis Nepal516, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_005810:11302511130251115417023920Yersinia pestis biovar Microtus str. 91001, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_004088:3382148*3382148340611023963Yersinia pestis KIM, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_008767:92781092781095056622757Neisseria meningitidis FAM18, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005085:1096000*1096000111962323624Chromobacterium violaceum ATCC 12472, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_012440:1080675*1080675110855327879Persephonella marina EX-H1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008599:90353090353092691623387Campylobacter fetus subsp. fetus 82-40, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_006396:2057209*2057209208818030972Haloarcula marismortui ATCC 43049 chromosome I, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_003155:64445006444500646671722218Streptomyces avermitilis MA-4680, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013959:82686882686887209945232Sideroxydans lithotrophicus ES-1 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008340:77420677420679412919924Alkalilimnicola ehrlichei MLHE-1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008027:36775003677500369685019351Pseudomonas entomophila L48, complete genome5e-0661.9BLASTN svgBLASTP svg