Pre_GI: BLASTN Hits

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Query: NC_009092:1263964 Shewanella loihica PV-4, complete genome

Start: 1263964, End: 1293099, Length: 29136

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008322:3585601*3585601360929823698Shewanella sp. MR-7, complete genome3e-154553BLASTN svgBLASTP svg
NC_009901:1309724*1309724133400224279Shewanella pealeana ATCC 700345, complete genome5e-150539BLASTN svgBLASTP svg
NC_008577:3738758*3738758376351324756Shewanella sp. ANA-3 chromosome 1, complete sequence8e-146525BLASTN svgBLASTP svg
NC_009052:1211989*1211989123680124813Shewanella baltica OS155, complete genome2e-131478BLASTN svgBLASTP svg
NC_009997:1368471*1368471138802919559Shewanella baltica OS195, complete genome9e-124452BLASTN svgBLASTP svg
NC_008700:1115436*1115436114339927964Shewanella amazonensis SB2B, complete genome4e-123450BLASTN svgBLASTP svg
NC_004347:3670145*3670145369364023496Shewanella oneidensis MR-1, complete genome7e-97363BLASTN svgBLASTP svg
NC_008321:35124713512471353058118111Shewanella sp. MR-4, complete genome5e-39170BLASTN svgBLASTP svg
NC_011750:12047*120474221230166Escherichia coli IAI39 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome4e-21111BLASTN svgBLASTP svg
CU928160:11381*113813595024570Escherichia coli IAI1 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_011751:12000*120003835526356Escherichia coli UMN026 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
AP010958:12660*126603398921330Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-18103BLASTN svgBLASTP svg
CP002185:11921*119213722925309Escherichia coli W, complete genome1e-18103BLASTN svgBLASTP svg
CP002516:4081484*4081484410409522612Escherichia coli KO11, complete genome1e-18103BLASTN svgBLASTP svg
CU928145:11394*113943596224569Escherichia coli 55989 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome1e-18103BLASTN svgBLASTP svg
NC_009800:12162*121623729725136Escherichia coli HS, complete genome1e-18103BLASTN svgBLASTP svg
NC_009801:11921*119213399422074Escherichia coli E24377A, complete genome1e-18103BLASTN svgBLASTP svg
NC_011748:11394*113943596224569Escherichia coli 55989, complete genome1e-18103BLASTN svgBLASTP svg
NC_015424:3890293*3890293391528924997Aeromonas veronii B565 chromosome, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_002655:12000*120003357021571Escherichia coli O157:H7 EDL933, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002695:12000*120003517323174Escherichia coli O157:H7 str. Sakai, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013850:4612812*4612812463649923688Klebsiella variicola At-22 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015633:2565753*2565753261159945847Vibrio anguillarum 775 chromosome chromosome I, complete sequence6e-1487.7BLASTN svgBLASTP svg
NC_008740:979830*979830100009920270Marinobacter aquaeolei VT8, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007298:3271071*3271071329537724307Dechloromonas aromatica RCB, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010410:3886500*3886500390459918100Acinetobacter baumannii AYE, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010611:31976*319765159919624Acinetobacter baumannii ACICU, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011146:3537546*3537546356804230497Geobacter bemidjiensis Bem, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010102:25893258934815522263Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-0971.9BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012856:20719420719423833931146Ralstonia pickettii 12D chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015138:32238632238634172219337Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_018868:28675002867500289242724928Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010995:3821327*3821327385020828882Cellvibrio japonicus Ueda107, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009434:1068281*1068281109060022320Pseudomonas stutzeri A1501, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011071:42358304235830426191326084Stenotrophomonas maltophilia R551-3, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_014532:349384*34938437223122848Halomonas elongata DSM 2581, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008752:26190326190328210620204Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-0661.9BLASTN svgBLASTP svg