Pre_GI: BLASTN Hits

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Query: NC_009092:1127000 Shewanella loihica PV-4, complete genome

Start: 1127000, End: 1151482, Length: 24483

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009831:1255995*1255995127895522961Shewanella sediminis HAW-EB3, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004603:37032037032039589225573Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete7e-0763.9BLASTN svgBLASTP svg
NC_015633:28013212801321282546624146Vibrio anguillarum 775 chromosome chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg