Pre_GI: BLASTN Hits

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Query: NC_009092:1047500 Shewanella loihica PV-4, complete genome

Start: 1047500, End: 1072729, Length: 25230

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009092:13053551305355132893623582Shewanella loihica PV-4, complete genome02716BLASTN svgBLASTP svg
NC_009092:26441642644164266929125128Shewanella loihica PV-4, complete genome02688BLASTN svgBLASTP svg
NC_020211:554736*55473659042335688Serratia marcescens WW4, complete genome9e-96359BLASTN svgBLASTP svg
NC_010498:4821519*4821519484497023452Escherichia coli SMS-3-5, complete genome1e-91345BLASTN svgBLASTP svg
NC_010473:4564590*4564590458823123642Escherichia coli str. K-12 substr. DH10B, complete genome5e-82313BLASTN svgBLASTP svg
NC_000913:4462782*4462782448642323642Escherichia coli K12, complete genome5e-82313BLASTN svgBLASTP svg
AC_000091:4472000*4472000449474322744Escherichia coli W3110 DNA, complete genome5e-82313BLASTN svgBLASTP svg
NC_012912:4194821*4194821421439319573Dickeya zeae Ech1591, complete genome2e-78301BLASTN svgBLASTP svg
NC_010658:4494103*4494103451209917997Shigella boydii CDC 3083-94, complete genome7e-78299BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome2e-75291BLASTN svgBLASTP svg
NC_020063:4127161*4127161415360026440Enterobacteriaceae bacterium strain FGI 57, complete genome2e-63252BLASTN svgBLASTP svg
NC_014500:443874*44387446959925726Dickeya dadantii 3937 chromosome, complete genome9e-59236BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome5e-54220BLASTN svgBLASTP svg
NC_008463:1223012*1223012124137318362Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-52214BLASTN svgBLASTP svg
NC_009092:19352811935281195928524005Shewanella loihica PV-4, complete genome5e-51210BLASTN svgBLASTP svg
NC_011770:1226923*1226923124809921177Pseudomonas aeruginosa LESB58, complete genome3e-49204BLASTN svgBLASTP svg
NC_015061:4203767*4203767424223938473Rahnella sp. Y9602 chromosome, complete genome2e-47198BLASTN svgBLASTP svg
NC_002516:4285477*4285477430981124335Pseudomonas aeruginosa PAO1, complete genome2e-47198BLASTN svgBLASTP svg
NC_004547:442927*44292748635443428Erwinia carotovora subsp. atroseptica SCRI1043, complete genome8e-47196BLASTN svgBLASTP svg
NC_013456:1819421*1819421184038720967Vibrio sp. Ex25 chromosome 1, complete genome4e-39170BLASTN svgBLASTP svg
NC_005139:178400017840001927839143840Vibrio vulnificus YJ016 chromosome I, complete sequence7e-38167BLASTN svgBLASTP svg
NC_004459:2443000*24430002588599145600Vibrio vulnificus CMCP6 chromosome I, complete sequence7e-38167BLASTN svgBLASTP svg
NC_005773:1333863*1333863135559921737Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-36161BLASTN svgBLASTP svg
NC_013456:17430461743046176911826073Vibrio sp. Ex25 chromosome 1, complete genome3e-34155BLASTN svgBLASTP svg
NC_012880:4117376*4117376413569218317Dickeya dadantii Ech703, complete genome1e-33153BLASTN svgBLASTP svg
NC_009092:26177826177828459922822Shewanella loihica PV-4, complete genome1e-33153BLASTN svgBLASTP svg
NC_004603:18975321897532193607538544Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete1e-33153BLASTN svgBLASTP svg
NC_002506:32455232455235839733846Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete2e-29139BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome6e-29137BLASTN svgBLASTP svg
NC_009092:37830003783000380209919100Shewanella loihica PV-4, complete genome6e-29137BLASTN svgBLASTP svg
NC_002977:2254440*2254440228000425565Methylococcus capsulatus str. Bath, complete genome1e-27133BLASTN svgBLASTP svg
NC_009092:32395003239500326129021791Shewanella loihica PV-4, complete genome4e-27131BLASTN svgBLASTP svg
NC_011901:13983761398376142787629501Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete9e-25123BLASTN svgBLASTP svg
NC_007712:3629358*3629358365546826111Sodalis glossinidius str. 'morsitans', complete genome9e-25123BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome1e-23119BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome2e-22115BLASTN svgBLASTP svg
NC_005140:34000034000036232922330Vibrio vulnificus YJ016 chromosome II, complete sequence2e-22115BLASTN svgBLASTP svg
NC_011753:20185002018500203623417735Vibrio splendidus LGP32 chromosome 1, complete genome4e-21111BLASTN svgBLASTP svg
NC_013456:1843000*1843000186410221103Vibrio sp. Ex25 chromosome 1, complete genome6e-20107BLASTN svgBLASTP svg
NC_006177:10604281060428108247522048Symbiobacterium thermophilum IAM 14863, complete genome6e-20107BLASTN svgBLASTP svg
NC_004460:16188921618892163876819877Vibrio vulnificus CMCP6 chromosome II, complete sequence6e-20107BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_018679:3843870*3843870386704523176Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete2e-19105BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome3e-18101BLASTN svgBLASTP svg
NC_008700:1115436*1115436114339927964Shewanella amazonensis SB2B, complete genome3e-18101BLASTN svgBLASTP svg
NC_007005:31998203199820323980239983Pseudomonas syringae pv. syringae B728a, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008570:3083850*3083850310907525226Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015424:4251369*4251369427627324905Aeromonas veronii B565 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_002939:80579480579482823022437Geobacter sulfurreducens PCA, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009092:36824133682413370194319531Shewanella loihica PV-4, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete3e-1591.7BLASTN svgBLASTP svg
NC_008027:29090002909000292988020881Pseudomonas entomophila L48, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014844:51155251155253463823087Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013093:1909305*1909305193716827864Actinosynnema mirum DSM 43827, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010505:21038872103887213081426928Methylobacterium radiotolerans JCM 2831, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008740:3602367*3602367362072718361Marinobacter aquaeolei VT8, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004578:32416183241618326508823471Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011769:2294387*2294387231565121265Desulfovibrio vulgaris str. 'Miyazaki F', complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015410:2505168*2505168253404528878Pseudomonas mendocina NK-01 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014844:1634985*1634985166007225088Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_005085:2869159*2869159289234223184Chromobacterium violaceum ATCC 12472, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008570:1094442*1094442111732922888Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014844:903877*90387792643122555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015379:5002595*5002595502209219498Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-1281.8BLASTN svgBLASTP svg
NC_015424:1603000*1603000163382230823Aeromonas veronii B565 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013522:1538994*1538994156384524852Thermanaerovibrio acidaminovorans DSM 6589, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007626:40380544038054406859930546Magnetospirillum magneticum AMB-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009464:25230922523092255904635955Uncultured methanogenic archaeon RC-I, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013855:558831*55883158109922269Azospirillum sp. B510 plasmid pAB510a, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_009943:748788*74878877355124764Candidatus Desulfococcus oleovorans Hxd3, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010814:90319990319992459921401Geobacter lovleyi SZ, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011146:33768163376816340354026725Geobacter bemidjiensis Bem, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014752:98117*9811712709928983Neisseria lactamica ST-640, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015172:95155095155097409922550Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_019892:37600037600040009924100Singulisphaera acidiphila DSM 18658 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_003116:93576*9357612141127836Neisseria meningitidis Z2491, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007492:33840773384077341717433098Pseudomonas fluorescens PfO-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008435:39151103915110393809922990Rhodopseudomonas palustris BisA53, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008767:136958*13695816389726940Neisseria meningitidis FAM18, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010120:2029880*2029880205559925720Neisseria meningitidis 053442, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007626:46887774688777471078422008Magnetospirillum magneticum AMB-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014532:26641392664139271259948461Halomonas elongata DSM 2581, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015376:17528831752883177658023698Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-0869.9BLASTN svgBLASTP svg
NC_015677:3339181*3339181336388124701Ramlibacter tataouinensis TTB310 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008435:2658986*2658986275828699301Rhodopseudomonas palustris BisA53, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008740:1357312*1357312138014322832Marinobacter aquaeolei VT8, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008781:3365468*3365468340127235805Polaromonas naphthalenivorans CJ2, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009937:412302*41230243181319512Azorhizobium caulinodans ORS 571, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009997:26996442699644272218322540Shewanella baltica OS195, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010424:69718769718777730380117Candidatus Desulforudis audaxviator MP104C, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003112:149593*14959317620526613Neisseria meningitidis MC58, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008609:29334682933468295611322646Pelobacter propionicus DSM 2379, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009664:570768*57076859843127664Kineococcus radiotolerans SRS30216, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009937:5033152*5033152505948226331Azorhizobium caulinodans ORS 571, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012660:5571500*5571500559959928100Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014831:22247332224733225059925867Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014910:42072274207227422797420748Alicycliphilus denitrificans BC chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015138:42467874246787426900822222Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009078:15785001578500160125422755Burkholderia pseudomallei 1106a chromosome II, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_007519:27730002773000280551732518Desulfovibrio alaskensis G20 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007435:30593730593732993724001Burkholderia pseudomallei 1710b chromosome II, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_006351:16317601631760165459922840Burkholderia pseudomallei K96243 chromosome 2, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_002506:37062937062943982869200Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete8e-0763.9BLASTN svgBLASTP svg
NC_010002:37853133785313380809922787Delftia acidovorans SPH-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010002:39808323980832399913918308Delftia acidovorans SPH-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015563:35716823571682359959927918Delftia sp. Cs1-4 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014973:26936722693672271365719986Geobacter sp. M18 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014960:3009500*3009500302719917700Anaerolinea thermophila UNI-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014733:107394*10739413952432131Methylovorus sp. MP688 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014121:20906302090630212903438405Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_013851:3142182*3142182316259920418Allochromatium vinosum DSM 180 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015379:3736500*3736500376722330724Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_013858:47729847729850922131924Azospirillum sp. B510 plasmid pAB510d, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009831:3092126*3092126311332621201Shewanella sediminis HAW-EB3, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007644:20998782099878212213022253Moorella thermoacetica ATCC 39073, complete genome3e-0661.9BLASTN svgBLASTP svg