Pre_GI: BLASTP Hits

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Query: NC_009092:3239500:3252174 Shewanella loihica PV-4, complete genome

Start: 3252174, End: 3253085, Length: 912

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:3232000:323335832333583234272915Shewanella sp. MR-4, complete genomeputative exonuclease, RdgC2e-123441
NC_006370:768745:791491791491792474984Photobacterium profundum SS9 chromosome 1, complete sequencerecombination associated protein9e-68257
NC_017328:335160:356588356588357571984Shigella flexneri 2002017 chromosome, complete genomeNonspecific DNA binding protein2e-67255
NC_008149:1002453:102640310264031027314912Yersinia pestis Nepal516, complete genomerecombination associated protein RdgC3e-65248
NC_009778:959982:974256974256975185930Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-57221
NC_018080:1730534:173436917343691735289921Pseudomonas aeruginosa DK2 chromosome, complete genomerecombination associated protein6e-55214
NC_012660:2045398:204890320489032049823921Pseudomonas fluorescens SBW25 chromosome, complete genomerecombination associated protein1e-49197
NC_011852:211314:212416212416213333918Haemophilus parasuis SH0165, complete genomerecombination associated protein dependent growth factor C2e-44179
NC_007146:1405459:141332914133291414225897Haemophilus influenzae 86-028NP, complete genomerecombination associated protein9e-40164
NC_009053:553298:561319561319562221903Actinobacillus pleuropneumoniae L20, complete genomeRecombination-associated protein RdgC2e-39162
NC_009567:904922:918852918852919763912Haemophilus influenzae PittGG chromosome, complete genomerecombination associated protein4e-39162
NC_013508:876431:888993888993889682690Edwardsiella tarda EIB202, complete genomerecombination-associated protein RdgC2e-36153
NC_014307:2760347:279058927905892791512924Ralstonia solanacearum CFBP2957 chromosome, complete genomerecombination associated protein1e-32140
NC_010645:369408:405880405880406782903Bordetella avium 197N, complete genomerecombination associated protein2e-29129
NC_003295:659837:664810664810665733924Ralstonia solanacearum GMI1000, complete genomerecombination associated protein5e-29128
NC_017516:1408000:142687814268781427777900Neisseria meningitidis H44/76 chromosome, complete genomerecombination-associated protein RdgC9e-28124
NC_008767:804655:805765805765806664900Neisseria meningitidis FAM18, complete genomeRdgC protein9e-28124
NC_017515:1402218:141862614186261419525900Neisseria meningitidis M04-240196 chromosome, complete genomerecombination-associated protein RdgC9e-28124
NC_017517:898771:899239899239900138900Neisseria meningitidis M01-240355 chromosome, complete genomerecombination-associated protein RdgC1e-27124
NC_017512:789600:790700790700791599900Neisseria meningitidis WUE 2594, complete genomerecombination associated protein RdgC1e-27124
NC_003116:1018813:101991310199131020812900Neisseria meningitidis Z2491, complete genomerecombination associated protein1e-27124
NC_017501:1493292:151127015112701512169900Neisseria meningitidis 8013, complete genomerecombination associated protein RdgC3e-27122
NC_016616:2768053:277026627702662771168903Dechlorosoma suillum PS chromosome, complete genomeDNA recombination-dependent growth factor C2e-24113
NC_013446:3034486:304803330480333048992960Comamonas testosteroni CNB-2, complete genomeputative exonuclease, RdgC1e-23110
NC_010943:1938136:195274719527471953649903Stenotrophomonas maltophilia K279a, complete genomeputative recombination-associated protein2e-23109
NC_013446:1724000:174428917442891745260972Comamonas testosteroni CNB-2, complete genomeputative exonuclease, RdgC3e-23108
NC_010677:1296000:131357913135791314439861Francisella tularensis subsp. mediasiatica FSC147, complete genomerecombination associated protein3e-0963.2
NC_014836:1606587:160658716065871607453867Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein2e-0653.1