Pre_GI: BLASTP Hits

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Query: NC_009092:2644164:2667624 Shewanella loihica PV-4, complete genome

Start: 2667624, End: 2668781, Length: 1158

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009831:3092126:3104548310454831057561209Shewanella sediminis HAW-EB3, complete genomeporin, gram-negative type1e-60233
NC_011663:3181579:3196540319654031977511212Shewanella baltica OS223 chromosome, complete genomeporin3e-58225
NC_009092:2902171:2918374291837429195851212Shewanella loihica PV-4, complete genomeporin, Gram-negative type6e-58224
NC_009052:1899954:1904800190480019060111212Shewanella baltica OS155, complete genomeporin, Gram-negative type2e-57223
NC_008321:2922000:2934350293435029355581209Shewanella sp. MR-4, complete genomeporin, Gram-negative type4e-57222
NC_008322:2983951:2995033299503329962411209Shewanella sp. MR-7, complete genomeporin, Gram-negative type7e-57221
NC_008577:3125675:3134873313487331360811209Shewanella sp. ANA-3 chromosome 1, complete sequenceporin, Gram-negative type4e-56219
NC_014012:3356629:3365417336541733666221206Shewanella violacea DSS12, complete genomeouter membrane porin, putative1e-54214
NC_014541:1280835:1286786128678612879401155Ferrimonas balearica DSM 9799 chromosome, complete genomeporin Gram-negative type4e-52205
NC_014541:1280835:1285627128562712866491023Ferrimonas balearica DSM 9799 chromosome, complete genomeporin Gram-negative type2e-28127
NC_021066:601029:6145096145096155791071Raoultella ornithinolytica B6, complete genomeouter membrane protein F1e-1791.3
NC_015061:2770856:2785809278580927869211113Rahnella sp. Y9602 chromosome, complete genomeporin Gram-negative type4e-1789.4
AP010958:2272919:2273321227332122743941074Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted outer membrane porin protein2e-1687.4
NC_009801:2159123:2163636216363621647091074Escherichia coli E24377A, complete genomeouter membrane protein homolog2e-1687.4
NC_013353:2272919:2273321227332122743941074Escherichia coli O103:H2 str. 12009, complete genomeouter membrane porin protein2e-1687.4
NC_016612:5208936:5214784521478452158541071Klebsiella oxytoca KCTC 1686 chromosome, complete genomeporin3e-1686.7
NC_020063:2449554:2453423245342324545921170Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane protein (porin)2e-1480.9
NC_016514:2476359:2480816248081624819251110Enterobacter cloacae EcWSU1 chromosome, complete genomeouter membrane protein N3e-1479.7
NC_008563:2041345:2041345204134520424901146Escherichia coli APEC O1, complete genomeOuter membrane protein N precursor4e-1479.3
NC_016612:4119410:4119410411941041205161107Klebsiella oxytoca KCTC 1686 chromosome, complete genomeouter membrane pore protein N, non-specific4e-1479.3
CU928160:2091249:2095731209573120969481218Escherichia coli IAI1 chromosome, complete genomePorin OmpN7e-1478.6
NC_011741:2091249:2095731209573120969481218Escherichia coli IAI1 chromosome, complete genomePorin OmpN7e-1478.6
NC_015566:3659318:3676851367685136779691119Serratia sp. AS12 chromosome, complete genomeporin1e-1377.8
NC_016902:1902431:1919201191920119203161116Escherichia coli KO11FL chromosome, complete genomeporin1e-1377.8
CP002185:2181936:2185539218553921866541116Escherichia coli W, complete genome1e-1377.8
CP002516:1902431:1919201191920119203161116Escherichia coli KO11, complete genomeporin Gram-negative type1e-1377.8
NC_013941:2425233:2428383242838324295701188Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1377
NC_020064:1409596:1409596140959614106931098Serratia marcescens FGI94, complete genomeouter membrane protein (porin)3e-1376.3
NC_011294:2334979:2359510235951023606461137Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane porin protein C7e-1375.5
NC_013008:2561586:256518825651882565832645Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein1e-1274.3
NC_011353:2563056:256620725662072566851645Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-1274.3
NC_002695:2655445:265859626585962659240645Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein1e-1274.3
NC_002655:2730659:273378027337802734454675Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein2e-1274.3
NC_016822:2201388:220989022098902210717828Shigella sonnei 53G, complete genomeputative outer membrane pore protein2e-1273.9
NC_014121:1848971:1862509186250918636181110Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeouter membrane pore protein N, non-specific2e-1273.9
NC_013716:2139952:2145537214553721467121176Citrobacter rodentium ICC168, complete genomeOuter membrane porin protein3e-1273.2
NC_013364:2522888:2526040252604025272031164Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane pore protein3e-1273.2
NC_011415:2248417:2252020225202022531831164Escherichia coli SE11 chromosome, complete genomeputative porin3e-1273.2
NC_010498:1210145:1224155122415512253181164Escherichia coli SMS-3-5, complete genomeporin family protein3e-1273.2
NC_013971:2408522:2436647243664724377531107Erwinia amylovora ATCC 49946 chromosome, complete genomeouter membrane protein C3e-1273.2
NC_013961:2370994:2399119239911924002251107Erwinia amylovora, complete genomeOuter membrane protein 1B precursor3e-1273.2
NC_013941:699286:7138747138747149561083Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeouter membrane porin protein C6e-1272.4
NC_015062:99969:109904109904110575672Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceporin Gram-negative type6e-1272
NC_011748:824367:8366178366178376991083Escherichia coli 55989, complete genomeouter membrane porin; DLP12 prophage7e-1272
CU928145:824367:8366178366178376991083Escherichia coli 55989 chromosome, complete genomeouter membrane porin; DLP12 prophage7e-1272
NC_013716:1756545:1760425176042517615581134Citrobacter rodentium ICC168, complete genomeouter membrane protein N (porin)7e-1272
NC_011283:1901229:1915691191569119168361146Klebsiella pneumoniae 342 chromosome, complete genomeporin1e-1171.2
NC_013282:923500:9260759260759271601086Cronobacter turicensis, complete genomeOuter membrane pore protein E2e-1170.9
NC_017060:59500:106734106734107405672Rahnella aquatilis HX2 plasmid PRA1, complete sequenceporin9e-1168.2
NC_011740:1991941:1996644199664419977471104Escherichia fergusonii ATCC 35469, complete genomeouter membrane porin; DLP12 prophage2e-1067
NC_005139:2201820:2269491226949122705161026Vibrio vulnificus YJ016 chromosome I, complete sequenceputative outer membrane protein4e-1066.2
NC_020260:3004500:3019080301908030201501071Cronobacter sakazakii Sp291, complete genomeouter membrane phosphoporin protein E8e-1065.1
NC_014500:2934232:2945973294597329470611089Dickeya dadantii 3937 chromosome, complete genomeouter membrane protein F9e-1065.1
NC_011751:643976:6614176614176624991083Escherichia coli UMN026 chromosome, complete genomeputative outer membrane porin1e-0964.7
NC_008563:1175035:1193929119392911950711143Escherichia coli APEC O1, complete genomeouter membrane porin protein NmpC precursor1e-0964.7
NC_007946:1239278:1256542125654212576841143Escherichia coli UTI89, complete genomeouter membrane porin protein NmpC precursor1e-0964.7
NC_011742:1177946:1197451119745111985931143Escherichia coli S88 chromosome, complete genomeouter membrane porin1e-0964.7
NC_004431:1401681:1420007142000714211491143Escherichia coli CFT073, complete genomeOuter membrane porin protein nmpC precursor1e-0964.7
NC_016832:948029:9818009818009829841185Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Outer membrane porin protein ompD2e-0964.3
NC_004631:948054:9841259841259853091185Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter membrane protein S12e-0964.3
NC_000913:2028472:2032045203204520332671223Escherichia coli K12, complete genome3e-0963.2
NC_011415:2153243:2153243215324321543251083Escherichia coli SE11 chromosome, complete genomeputative outer membrane porin protein5e-0962.8
NC_014121:1101093:1103964110396411050161053Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeouter membrane phosphoporin protein E6e-0962.4
NC_000913:2028472:203207520320752032560486Escherichia coli K12, complete genome7e-0962
NC_015761:1970042:1977884197788419790741191Salmonella bongori NCTC 12419, complete genomeouter membrane protein S16e-0962
NC_011274:1129686:1153689115368911548851197Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91outer membrane protein S19e-0961.6
NC_016810:2027311:2035137203513720363331197Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane protein S11e-0861.2
NC_016856:2085283:2088974208897420901701197Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative porin1e-0861.2
NC_016857:2027311:2035137203513720363331197Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative porin1e-0861.2
NC_016863:2029340:2037166203716620383621197Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative porin1e-0861.2
NC_017046:2026672:2034498203449820356941197Salmonella enterica subsp. enterica serovar Typhimurium str. 798outer membrane protein S11e-0861.2
NC_000913:558920:5749815749815761081128Escherichia coli K12, complete genomeDLP12 prophage; truncated outer membrane porin (pseudogene)1e-0861.2
AC_000091:558920:5749815749815761081128Escherichia coli W3110 DNA, complete genome1e-0861.2
NC_010473:623810:6276016276016286401040Escherichia coli str. K-12 substr. DH10B, complete genome1e-0861.2
NC_016514:891772:8958698958698969211053Enterobacter cloacae EcWSU1 chromosome, complete genomeouter membrane pore protein E1e-0860.8
NC_011740:1991941:1995018199501819960731056Escherichia fergusonii ATCC 35469, complete genomeOuter membrane protein N precursor (porin)2e-0860.5
NC_011149:1110642:1126504112650411277151212Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane protein N3e-0860.1
NC_010498:301000:3028133028133038681056Escherichia coli SMS-3-5, complete genomeouter membrane pore protein E3e-0860.1
NC_013716:357928:3596823596823607341053Citrobacter rodentium ICC168, complete genomeouter membrane pore protein E3e-0859.7
NC_016831:1865681:1870280187028018714761197Salmonella enterica subsp. enterica serovar Gallinarum/pullorumouter membrane protein S14e-0859.3
NC_004431:2185750:2185750218575021868771128Escherichia coli CFT073, complete genomeOuter membrane protein N precursor5e-0859.3
NC_008253:1938975:1938975193897519400331059Escherichia coli 536, complete genomeputative outer membrane pore protein7e-0858.5
NC_010473:498252:5130845130845153802297Escherichia coli str. K-12 substr. DH10B, complete genome1e-0758.2
NC_002695:2056545:2066351206635120674511101Escherichia coli O157:H7 str. Sakai, complete genomeputaive outer membrane porin protein1e-0758.2
NC_002655:2015000:2021022202102220221221101Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane porin protein1e-0758.2
NC_011353:1971145:1980951198095119820511101Escherichia coli O157:H7 str. EC4115 chromosome, complete genomegram-negative porin family protein1e-0758.2
NC_013008:1971662:1979927197992719810271101Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane porin protein1e-0758.2
NC_007384:1737885:1745537174553717466371101Shigella sonnei Ss046, complete genomeputative outer membrane porin protein1e-0758.2
NC_016822:1818897:1824859182485918259591101Shigella sonnei 53G, complete genomeouter membrane porin protein1e-0758.2
NC_014500:2934232:2942238294223829433411104Dickeya dadantii 3937 chromosome, complete genomeouter membrane porin 1a (Ia;b;F)1e-0758.2
NC_021066:3028421:3030950303095030320021053Raoultella ornithinolytica B6, complete genomeouter membrane phosphoporin protein E1e-0758.2
NC_013941:1857724:1870815187081518719151101Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeGram-negative porin family1e-0757.8
NC_011750:1809943:1822110182211018232101101Escherichia coli IAI39 chromosome, complete genomeouter membrane porin protein ompD2e-0757.4
NC_014121:2745097:2764515276451527655701056Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeOmpF porin2e-0757.4
NC_012731:1088321:1105013110501311060651053Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeouter membrane phosphoporin protein E2e-0757.4
NC_014500:2934232:2943874294387429449801107Dickeya dadantii 3937 chromosome, complete genomeouter membrane protein F2e-0757.4
NC_011283:4438500:4441282444128244423341053Klebsiella pneumoniae 342 chromosome, complete genomeouter membrane phosphoporin protein E2e-0757
NC_010498:1700447:1705762170576217068621101Escherichia coli SMS-3-5, complete genomeporin family protein2e-0757
NC_017328:1835108:1844591184459118456911101Shigella flexneri 2002017 chromosome, complete genomeputative outer membrane porin protein4e-0756.2
NC_004741:1823000:1828994182899418300941101Shigella flexneri 2a str. 2457T, complete genomeputative outer membrane porin protein4e-0756.2
NC_004337:1783645:1792048179204817931481101Shigella flexneri 2a str. 301, complete genomeputative outer membrane porin protein5e-0755.8
NC_008258:1784637:1791372179137217924721101Shigella flexneri 5 str. 8401, complete genomeputative outer membrane porin protein1e-0654.7
NC_015663:4906652:4912147491214749132891143Enterobacter aerogenes KCTC 2190 chromosome, complete genomeouter membrane pore protein S11e-0654.7
NC_020064:2779864:2792369279236927934481080Serratia marcescens FGI94, complete genomeouter membrane protein (porin)2e-0653.9
NC_014307:533975:5339755339755351231149Ralstonia solanacearum CFBP2957 chromosome, complete genomeporin3e-0653.5
NC_011205:1227373:124097212409721241529558Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533e-0653.1
NC_014618:3700640:3715169371516937162661098Enterobacter cloacae SCF1 chromosome, complete genomeporin6e-0652.4