Pre_GI: BLASTP Hits

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Query: NC_009092:2529518:2539707 Shewanella loihica PV-4, complete genome

Start: 2539707, End: 2540279, Length: 573

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010172:3413392:342022034202203420816597Methylobacterium extorquens PA1, complete genomehypothetical protein7e-53206
NC_018012:3300000:331205633120563312634579Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein5e-50196
NC_002678:3210751:322455632245563225146591Mesorhizobium loti MAFF303099, complete genomecontains weak similarity to TrbB (1-88) and phosphoribosyl aminoimidazole carboxylase (107-139)3e-23108