Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:1989977:2001262 Shewanella loihica PV-4, complete genome

Start: 2001262, End: 2005365, Length: 4104

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009831:3092126:3098020309802031021114092Shewanella sediminis HAW-EB3, complete genomeproprotein convertase, P01508
NC_010334:3040589:3047155304715530512464092Shewanella halifaxensis HAW-EB4, complete genomeProprotein convertase P01476
NC_013166:32474:4243342433462393807Kangiella koreensis DSM 16069, complete genomeProprotein convertase P2e-172607
NC_009092:2644164:2652156265215626537751620Shewanella loihica PV-4, complete genomehypothetical protein4e-143509
NC_009338:5161886:5167293516729351736376345Mycobacterium gilvum PYR-GCK chromosome, complete genomeYVTN beta-propeller repeat-containing protein8e-56219
NC_008314:2611873:2616842261684226241227281Ralstonia eutropha H16 chromosome 2, complete sequenceRTX toxin exported protein2e-46189
NC_007912:1019682:10322881032288104271210425Saccharophagus degradans 2-40, complete genomehypothetical protein1e-45186
NC_010506:602000:59737259737264634048969Shewanella woodyi ATCC 51908, complete genomeouter membrane adhesin like proteiin5e-35150
NC_008312:5308927:53149095314909534451229604Trichodesmium erythraeum IMS101, complete genomeHemolysin-type calcium-binding region3e-34148
NC_010546:3071377:3089839308983930956315793Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein3e-26121
NC_007645:2112622:21126222112622212455211931Hahella chejuensis KCTC 2396, complete genomeRhs family protein2e-24115
NC_015846:67603:6760367603774339831Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein7e-23110
NC_008322:641197:6526496526496562963648Shewanella sp. MR-7, complete genomeputative outer membrane adhesin like protein8e-23110
NC_008358:2638245:2652905265290526542361332Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein9e-23110
NC_009446:351042:3584523584523667408289Dichelobacter nodosus VCS1703A, complete genomepotential RTX family protein1e-22109
NC_015846:369500:3771183771183789171800Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein2e-22109
NC_007645:5747721:57599405759940577152811589Hahella chejuensis KCTC 2396, complete genomeRhs family protein1e-21106
NC_005140:660305:6637946637946676543861Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein2e-1792.4
NC_014966:638355:6418456418456457053861Vibrio vulnificus MO6-24/O chromosome II, complete sequencehypothetical protein6e-1790.9
NC_004460:81687:8528785287890363750Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein1e-1689.7
NC_014166:1424754:1442461144246114448242364Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeouter membrane adhesin like proteiin4e-1688.2
NC_008358:2638245:2664788266478826658611074Hyphomonas neptunium ATCC 15444, complete genomeRHS/YD repeat protein5e-1687.8
NC_020126:2262049:2263636226363622660262391Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-1585.5
NC_008095:2031997:2050537205053720531882652Myxococcus xanthus DK 1622, complete genomecysteine-rich repeat protein8e-1584
NC_008312:2888237:2897004289700428989951992Trichodesmium erythraeum IMS101, complete genomeIntegrin, beta chain-like5e-1377.8
NC_015177:3195249:32002113200211321944019230Pedobacter saltans DSM 12145 chromosome, complete genomeconserved repeat domain protein7e-1377.4
NC_016614:822715:8326998326998354792781Vibrio sp. EJY3 chromosome 2, complete sequencehypothetical protein3e-1172
NC_014958:3094500:3113701311370131193435643Deinococcus maricopensis DSM 21211 chromosome, complete genomehypothetical protein9e-1170.5
NC_009092:1874888:1879360187936018824283069Shewanella loihica PV-4, complete genomePeptidase M11, gametolysin3e-1068.9
NC_014840:286767:2881802881802913923213Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceouter membrane autotransporter barrel domain-containing protein6e-1067.8
NC_017192:1799000:1803104180310418105137410Arcobacter sp. L, complete genomehypothetical protein9e-1067
NC_007645:2533274:2538445253844525406612217Hahella chejuensis KCTC 2396, complete genomeZinc metalloprotease (elastase)2e-0965.9
NC_013093:2599591:2616167261616726178581692Actinosynnema mirum DSM 43827, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin3e-0965.5
NC_014533:416500:41253641253644656434029Cyanothece sp. PCC 7822 plasmid Cy782201, complete sequenceYD repeat-containing protein7e-0860.8
NC_019892:865500:8833658833658848011437Singulisphaera acidiphila DSM 18658 chromosome, complete genomehypothetical protein9e-0860.5
NC_007645:2533274:2535762253576225379062145Hahella chejuensis KCTC 2396, complete genomeRegulatory P domain of the subtilisin-like proprotein convertases and other protease1e-0760.1
NC_015563:3571682:3588133358813335907512619Delftia sp. Cs1-4 chromosome, complete genomecell surface receptor IPT/TIG domain-containing protein2e-0759.7
NC_008577:613958:6202566202566222171962Shewanella sp. ANA-3 chromosome 1, complete sequencePeptidase M11, gametolysin6e-0757.8
NC_009483:2640403:2716147271614727190712925Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein1e-0656.6
NC_018750:5078705:5099429509942951010001572Streptomyces venezuelae ATCC 10712, complete genomeAlkaline serine exoprotease A precursor2e-0655.8
NC_019774:74131:84305843059487010566Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequenceProprotein convertase P3e-0655.5
NC_005140:340000:3404283404283424522025Vibrio vulnificus YJ016 chromosome II, complete sequencesubtilisin-like serine protease5e-0654.7