Pre_GI: BLASTP Hits

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Query: NC_009092:1935281:1956389 Shewanella loihica PV-4, complete genome

Start: 1956389, End: 1957090, Length: 702

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007907:4692336:470300647030064703665660Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-22103
NC_007606:3755155:376086637608663761591726Shigella dysenteriae Sd197, complete genomenegative regulator for pho regulon7e-80296
NC_002655:4747926:476254247625424763267726Escherichia coli O157:H7 EDL933, complete genomenegative regulator for pho regulon and putative enzyme in phosphate metabolism7e-80296
NC_004337:3590323:384031038403103841035726Shigella flexneri 2a str. 301, complete genomenegative regulator for pho regulon and putative enzyme in phosphate metabolism6e-80296
NC_014500:4883794:488379448837944884525732Dickeya dadantii 3937 chromosome, complete genomenegative regulator of PhoR/PhoB two-component regulator6e-78290
NC_007929:428743:451624451624452280657Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhosphate transport system protein5e-1581.3
NC_013857:478000:498829498829499599771Azospirillum sp. B510 plasmid pAB510c, complete sequencephosphate transport system protein3e-29128
NC_016027:346768:362751362751363452702Gluconacetobacter xylinus NBRC 3288, complete genomephosphate transport system protein PhoU6e-27120
NC_013665:1865122:188366918836691884322654Methanocella paludicola SANAE, complete genomephosphate transport system protein PhoU9e-1270.5
NC_020291:1389114:140208814020881402750663Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphate transport system protein PhoU2e-1685.9
NC_007164:453743:455269455269456009741Corynebacterium jeikeium K411, complete genomephosphate transport system regulator1e-0757
NC_005085:1269787:132502313250231325727705Chromobacterium violaceum ATCC 12472, complete genomephosphate transport system regulatory protein4e-54211
NC_010498:4166903:418152841815284182253726Escherichia coli SMS-3-5, complete genomephosphate transport system regulatory protein PhoU7e-80296
NC_001263:2236777:223677722367772237418642Deinococcus radiodurans R1 chromosome 1, complete sequencephosphate transport system regulatory protein PhoU8e-24110
NC_015948:2032399:203239920323992033079681Haloarcula hispanica ATCC 33960 chromosome chromosome I, completephosphate transport system regulatory protein PhoU6e-1374.3
NC_013960:2366910:236779823677982368511714Nitrosococcus halophilus Nc4 chromosome, complete genomephosphate transport system regulatory protein PhoU2e-60232
NC_014623:6950638:695143069514306952119690Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephosphate transport system regulatory protein phou6e-35147
NC_021175:845370:849690849690850343654Streptococcus oligofermentans AS 1.3089, complete genomephosphate transporter PhoU2e-22105
NC_013941:4567820:458105945810594581784726Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphate transporter regulatory protein PhoU7e-80296
NC_009659:2523874:256043525604352561145711Janthinobacterium sp. Marseille chromosome, complete genomephosphate uptake regulator3e-52204
NC_010610:1385066:141158114115811412285705Lactobacillus fermentum IFO 3956, complete genomephosphate uptake regulator4e-1994.7
NC_015214:1458480:147507114750711475709639Lactobacillus acidophilus 30SC chromosome, complete genomephosphate uptake regulator1e-1686.7
NC_009523:379705:397318397318397974657Roseiflexus sp. RS-1 chromosome, complete genomephosphate uptake regulator PhoU8e-1580.9
NC_011593:2372362:237662923766292377303675Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phosphate uptake regulator PhoU2e-1272.8
NC_016901:1885694:189130518913051892015711Shewanella baltica OS678 chromosome, complete genomephosphate uptake regulator PhoU4e-114410
NC_009633:4733678:473506447350644735714651Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphate uptake regulator PhoU4e-28124
NC_012912:4737703:475725547572554757983729Dickeya zeae Ech1591, complete genomephosphate uptake regulator, PhoU2e-77288
NC_010524:3094303:309575530957553096459705Leptothrix cholodnii SP-6, complete genomephosphate uptake regulator, PhoU1e-49196
NC_013894:1:198081980820476669Thermocrinis albus DSM 14484 chromosome, complete genomephosphate uptake regulator, PhoU1e-30133
NC_014376:386650:390412390412391074663Clostridium saccharolyticum WM1 chromosome, complete genomephosphate uptake regulator, PhoU3e-2098.6
NC_010730:741842:774624774624775289666Sulfurihydrogenibium sp. YO3AOP1, complete genomephosphate uptake regulator, PhoU5e-1787.8
NC_014152:2181360:220016822001682200830663Thermincola sp. JR, complete genomephosphate uptake regulator, PhoU1e-30133
NC_014377:961259:962050962050962712663Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphate uptake regulator, PhoU4e-28124
NC_014926:608894:638205638205638912708Thermovibrio ammonificans HB-1 chromosome, complete genomephosphate uptake regulator, PhoU7e-21100
NC_012881:2878000:289829628982962898964669Desulfovibrio salexigens DSM 2638, complete genomephosphate uptake regulator, PhoU2e-1789.4
NC_013517:300411:321300321300322004705Sebaldella termitidis ATCC 33386, complete genomephosphate uptake regulator, PhoU3e-0962.4
NC_011145:4628000:465454846545484655249702Anaeromyxobacter sp. K, complete genomephosphate uptake regulator, PhoU7e-35147
NC_008554:840079:853845853845854504660Syntrophobacter fumaroxidans MPOB, complete genomephosphate uptake regulator, PhoU5e-21101
NC_009922:315870:319412319412320062651Alkaliphilus oremlandii OhILAs, complete genomephosphate uptake regulator, PhoU1e-1893.2
NC_013947:2351208:235757823575782358228651Stackebrandtia nassauensis DSM 44728 chromosome, complete genomephosphate uptake regulator, PhoU2e-1272.4
NC_015064:1984662:198848419884841989146663Acidobacterium sp. MP5ACTX9 chromosome, complete genomephosphate uptake regulator, PhoU2e-24112
NC_015064:2421034:243521724352172435894678Acidobacterium sp. MP5ACTX9 chromosome, complete genomephosphate uptake regulator, PhoU2e-21102
NC_014122:1313303:331933193999681Methanocaldococcus infernus ME chromosome, complete genomephosphate uptake regulator, PhoU3e-1478.6
NC_019974:1020500:103024110302411030909669Natronococcus occultus SP4, complete genomephosphate uptake regulator, PhoU2e-1272.4
NC_013194:1955582:1974429197442919754931065Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completephosphate uptake regulator, PhoU5e-1064.7
NC_002695:4678945:469356146935614694286726Escherichia coli O157:H7 str. Sakai, complete genomePhoU7e-80296
NC_007604:1967770:198893119889311989605675Synechococcus elongatus PCC 7942, complete genomePhoU6e-0754.3
NC_002937:1548081:155556415555641556241678Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completePhoU family protein2e-1582.8
NC_014246:1545214:156288315628831563548666Mobiluncus curtisii ATCC 43063 chromosome, complete genomePnaS family phosphate:sodium (Na+) symporter2e-0962.8
NC_003228:3212500:322661532266153227304690Bacteroides fragilis NCTC 9343, complete genomeputative phosphate transport chemotaxis-related protein2e-1582.4
NC_016776:3258939:326402332640233264712690Bacteroides fragilis 638R, complete genomeputative phosphate transport chemotaxis-related protein2e-1582.4
NC_009614:4844000:484941548494154850116702Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator1e-1583.6
NC_011751:4373961:438859243885924389317726Escherichia coli UMN026 chromosome, complete genometranscriptional regulator PhoU7e-80296
NC_009648:4497749:452339245233924524117726Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranscriptional regulator PhoU1e-80299
NC_011353:4782040:479665647966564797381726Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator PhoU7e-80296
NC_011750:4490573:450519845051984505923726Escherichia coli IAI39 chromosome, complete genometranscriptional regulator PhoU7e-80296
NC_013008:4738083:475269947526994753424726Escherichia coli O157:H7 str. TW14359 chromosome, complete genometranscriptional regulator PhoU7e-80296
NC_009138:467268:495841495841496524684Herminiimonas arsenicoxydans, complete genomeTranscriptional repressor for high-affinity phosphate uptake7e-1270.9
NC_017219:2372000:237644723764472377121675Bifidobacterium longum subsp. infantis ATCC 15697, complete genometwo-component response regulator2e-1272.8