Pre_GI: BLASTP Hits

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Query: NC_009092:1874888:1898830 Shewanella loihica PV-4, complete genome

Start: 1898830, End: 1899225, Length: 396

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:776734:798488798488798877390Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1succinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_011083:824659:846386846386846790405Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,succinate dehydrogenase, cytochrome b556 subunit2e-29127
NC_011080:780850:802588802588802992405Salmonella enterica subsp. enterica serovar Newport str. SL254,succinate dehydrogenase, cytochrome b556 subunit2e-29127
NC_010102:2322866:232570623257062326110405Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-29127
NC_011094:842038:863726863726864130405Salmonella enterica subsp. enterica serovar Schwarzengrund strsuccinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_016832:2201860:220470022047002205104405Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Succinate dehydrogenase cytochrome b556 subunit2e-29127
NC_016860:816000:836807836807837211405Salmonella enterica subsp. enterica serovar Typhimurium strsuccinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_006511:2090058:209216520921652092554390Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsuccinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_004631:2205821:220792822079282208317390Salmonella enterica subsp. enterica serovar Typhi Ty2, completesuccinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_003197:776238:797992797992798381390Salmonella typhimurium LT2, complete genomesuccinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_003198:751779:772772772772773161390Salmonella enterica subsp. enterica serovar Typhi str. CT18,succinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_011147:2085241:208734820873482087737390Salmonella enterica subsp. enterica serovar Paratyphi A strsuccinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_016810:775649:797403797403797792390Salmonella enterica subsp. enterica serovar Typhimurium strsuccinate dehydrogenase cytochrome b-556 subunit2e-29127
NC_016856:776735:798489798489798878390Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssuccinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_016857:775649:797403797403797792390Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74succinate dehydrogenase cytochrome b556 large membrane subunit2e-29127
NC_008150:650899:670124670124670513390Yersinia pestis Antiqua, complete genomesuccinate dehydrogenase cytochrome b-556 subunit3e-27120
NC_003143:1233128:125338812533881253777390Yersinia pestis CO92, complete genomesuccinate dehydrogenase cytochrome b556 large membrane subunit3e-27120
NC_010634:1342393:136483313648331365222390Yersinia pseudotuberculosis PB1/+, complete genomesuccinate dehydrogenase, cytochrome b556 subunit3e-27120
NC_010159:1417993:143754014375401437929390Yersinia pestis Angola, complete genomesuccinate dehydrogenase, cytochrome b556 subunit3e-27120
NC_017168:4155143:417540441754044175793390Yersinia pestis A1122 chromosome, complete genomesuccinate dehydrogenase cytochrome b556 large membrane subunit3e-27120
NC_009656:3817261:382748038274803827866387Pseudomonas aeruginosa PA7 chromosome, complete genomesuccinate dehydrogenase, cytochrome b556 subunit1e-2098.6
NC_012779:2755338:276251727625172762906390Edwardsiella ictaluri 93-146, complete genomesuccinate dehydrogenase, cytochrome b556 subunit, putative3e-2097.1
NC_009434:2006500:201956920195692019943375Pseudomonas stutzeri A1501, complete genomesuccinate dehydrogenase (C subunit)1e-1891.7
NC_007963:1370903:138869913886991389076378Chromohalobacter salexigens DSM 3043, complete genomesuccinate dehydrogenase, cytochrome b subunit8e-1682.4
NC_011662:131956:150795150795151181387Thauera sp. MZ1T, complete genomesuccinate dehydrogenase, cytochrome b556 subunit3e-1270.5
NC_013861:728648:751585751585751959375Legionella longbeachae NSW150, complete genomesuccinate dehydrogenase, cytochrome b556 subunit7e-1269.3
NC_017046:775636:797491797491797778288Salmonella enterica subsp. enterica serovar Typhimurium str. 798succinate dehydrogenase cytochrome b-556 subunit2e-1167.8
NC_005085:1096000:111186211118621112239378Chromobacterium violaceum ATCC 12472, complete genomesuccinate dehydrogenase cytochrome b-556 subunit3e-1167.4
NC_019907:819165:837669837669838064396Liberibacter crescens BT-1 chromosome, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit5e-0959.7
NC_010336:996661:104605810460581046438381Francisella philomiragia subsp. philomiragia ATCC 25017, completesuccinate dehydrogenase, cytochrome b5563e-0857
NC_015696:517941:567504567504567884381Francisella sp. TX077308 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit5e-0856.6
NC_008369:1702885:172017517201751720648474Francisella tularensis subsp. holarctica OSU18, complete genomesuccinate dehydrogenase1e-0755.1
NC_010677:96470:145665145665146138474Francisella tularensis subsp. mediasiatica FSC147, complete genomesuccinate dehydrogenase, cytochrome b556 subunit1e-0755.1
NC_006570:24636:738157381574288474Francisella tularensis subsp. tularensis Schu 4, complete genomesuccinate dehydrogenase, cytochrome b5561e-0755.1
NC_008601:1733940:175118217511821751655474Francisella tularensis subsp. novicida U112, complete genomesuccinate dehydrogenase, cytochrome b5561e-0755.1
NC_008245:66852:738317383174304474Francisella tularensis subsp. tularensis FSC 198, complete genomesuccinate dehydrogenase, cytochrome b5561e-0755.1
NC_016933:66854:738337383374306474Francisella tularensis TIGB03 chromosome, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit1e-0755.1
NC_016937:66854:738337383374306474Francisella tularensis subsp. tularensis TI0902 chromosome,Succinate dehydrogenase cytochrome b-556 subunit1e-0755.1
NC_007880:1703346:172054317205431720932390Francisella tularensis subsp. holarctica, complete genomesuccinate dehydrogenase, cytochrome b5562e-0754.7
NC_009749:1699152:171644217164421716822381Francisella tularensis subsp. holarctica FTA, complete genomesuccinate dehydrogenase, cytochrome b5562e-0754.3
NC_009257:151737:158809158809159189381Francisella tularensis subsp. tularensis WY96-3418 chromosome,succinate dehydrogenase, cytochrome b subunit2e-0754.3
NC_015563:4773415:478154947815494781971423Delftia sp. Cs1-4 chromosome, complete genomesuccinate dehydrogenase, cytochrome b556 subunit2e-0754.3
NC_009881:166500:173782173782174156375Rickettsia akari str. Hartford, complete genomesuccinate dehydrogenase cytochrome b-556 subunit1e-0652
NC_009879:141000:147799147799148173375Rickettsia canadensis str. McKiel, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit1e-0652
NC_016929:141972:148764148764149138375Rickettsia canadensis str. CA410 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit1e-0652
NC_003103:164972:167594167594167968375Rickettsia conorii str. Malish 7, complete genomesuccinate dehydrogenase cytochrome b-556 subunit [EC:1.3.99.1]2e-0651.6
NC_010263:167450:170033170033170407375Rickettsia rickettsii str. Iowa, complete genomesuccinate dehydrogenase cytochrome b556 subunit2e-0651.2
NC_009882:167350:169940169940170314375Rickettsia rickettsii str. 'Sheila Smith', complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-0651.2
NC_016908:167423:170013170013170387375Rickettsia rickettsii str. Colombia chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-0651.2
NC_016911:167398:169981169981170355375Rickettsia rickettsii str. Hauke chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-0651.2
NC_016914:167537:170120170120170494375Rickettsia rickettsii str. Hino chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-0651.2
NC_016915:162841:170206170206170580375Rickettsia rickettsii str. Hlp#2 chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-0651.2
NC_016930:165376:167974167974168348375Rickettsia philipii str. 364D chromosome, complete genomesuccinate dehydrogenase cytochrome b-556 subunit2e-0651.2
NC_014914:1678973:167934716793471679760414Taylorella equigenitalis MCE9 chromosome, complete genomeSuccinate dehydrogenase cytochrome b-556 subunit2e-0650.8
NC_015740:1845370:185731218573121857572261Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completesuccinate dehydrogenase subunit C5e-0650.1