Pre_GI: BLASTP Hits

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Query: NC_009092:179226:201257 Shewanella loihica PV-4, complete genome

Start: 201257, End: 201814, Length: 558

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009659:1050532:106420110642011064737537Janthinobacterium sp. Marseille chromosome, complete genomeThiol:disulfide interchange protein dsbE (cytochrome c biogenesis protein ccmG)3e-46184
NC_015222:1492500:150186615018661502396531Nitrosomonas sp. AL212 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE8e-44176
NC_015731:1381737:139321913932191393749531Nitrosomonas sp. Is79A3 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE2e-43174
NC_004578:4061372:409004840900484090584537Pseudomonas syringae pv. tomato str. DC3000, complete genomethiol:disulfide interchange protein DsbE2e-40165
NC_013421:2972269:297904629790462979603558Pectobacterium wasabiae WPP163, complete genomeperiplasmic protein thiol/disulphide oxidoreductase DsbE3e-40164
NC_011080:3976441:398394439839443984501558Salmonella enterica subsp. enterica serovar Newport str. SL254,thiol:disulfide interChange protein DsbE2e-39161
NC_011080:2342672:235020523502052350762558Salmonella enterica subsp. enterica serovar Newport str. SL254,thiol:disulfide interChange protein DsbE2e-39161
NC_015224:3291736:329345932934593294025567Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,thiol:disulfide interchange protein DsbE6e-39160
NC_011149:3930358:393785339378533938410558Salmonella enterica subsp. enterica serovar Agona str. SL483,thiol:disulfide interChange protein DsbE1e-38159
NC_003198:3824187:383480738348073835364558Salmonella enterica subsp. enterica serovar Typhi str. CT18,thiol:disulfide interchange protein1e-38159
NC_003198:2297837:230538423053842305941558Salmonella enterica subsp. enterica serovar Typhi str. CT18,thiol:disulfide interchange protein1e-38159
NC_004631:3809678:382029738202973820854558Salmonella enterica subsp. enterica serovar Typhi Ty2, completethiol:disulfide interchange protein1e-38159
NC_004631:685357:698772698772699329558Salmonella enterica subsp. enterica serovar Typhi Ty2, completethiol:disulfide interchange protein1e-38159
NC_011094:2348491:235421123542112354768558Salmonella enterica subsp. enterica serovar Schwarzengrund strthiol:disulfide interChange protein DsbE1e-38159
NC_011094:3887648:389515138951513895708558Salmonella enterica subsp. enterica serovar Schwarzengrund strthiol:disulfide interChange protein DsbE1e-38159
NC_016832:3798475:380909438090943809651558Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Thiol:disulfide interchange protein dsbE1e-38159
NC_016832:687000:698726698726699283558Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Thiol:disulfide interchange protein dsbE1e-38159
NC_010102:683444:696833696833697390558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-38158
NC_010102:3955479:396224339622433962800558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-38158
NC_012125:1517925:153134015313401531897558Salmonella enterica subsp. enterica serovar Paratyphi C strainheme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis2e-38158
NC_012125:3941974:394912239491223949679558Salmonella enterica subsp. enterica serovar Paratyphi C strainheme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis2e-38158
NC_010067:3753971:376466037646603765217558Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-38157
NC_006905:2355290:236271723627172363274558Salmonella enterica subsp. enterica serovar Choleraesuis strheme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis6e-38156
NC_006905:3942753:395410539541053954662558Salmonella enterica subsp. enterica serovar Choleraesuis strheme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis6e-38156
NC_011274:2325840:233339723333972333954558Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91thiol:disulfide interchange protein1e-37155
NC_011274:3799696:381031438103143810871558Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91thiol:disulfide interchange protein1e-37155
NC_011294:2334979:234252823425282343085558Salmonella enterica subsp. enterica serovar Enteritidis strcytochrome c biogenesis protein CcmG1e-37155
NC_011294:3880500:388801738880173888574558Salmonella enterica subsp. enterica serovar Enteritidis strthiol:disulfide interchange protein1e-37155
NC_016831:3779611:379123137912313791788558Salmonella enterica subsp. enterica serovar Gallinarum/pullorumthiol:disulfide interchange protein (cytochrome c biogenesis protein ccmg)1e-37155
NC_016831:687549:700599700599701156558Salmonella enterica subsp. enterica serovar Gallinarum/pullorumthiol:disulfide interchange protein (cytochrome c biogenesis protein ccmg)1e-37155
NC_011205:4038884:404638640463864046943558Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853thiol:disulfide interChange protein DsbE1e-37155
NC_011205:2462025:246957424695742470131558Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853thiol:disulfide interChange protein DsbE1e-37155
NC_011147:682897:696312696312696869558Salmonella enterica subsp. enterica serovar Paratyphi A strthiol:disulfide interchange protein1e-37155
NC_011147:3789696:379710337971033797660558Salmonella enterica subsp. enterica serovar Paratyphi A strthiol:disulfide interchange protein1e-37155
NC_006511:682863:696278696278696835558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCthiol:disulfide interchange protein1e-37155
NC_006511:3794017:380142438014243801981558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCheme lyase/disulfide oxidoreductase, cytochrome c-type biogenesis1e-37155
NC_010067:632683:647263647263647820558Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-37155
NC_010694:1250841:127011112701111270668558Erwinia tasmaniensis, complete genomeCytochrome c biogenesis protein CcmG (Thiol:disulfide interchange protein DsbE)2e-37155
NC_003197:4005857:401336140133614013918558Salmonella typhimurium LT2, complete genomeheme lyase disulfide oxidoreductase1e-37155
NC_011083:2375061:239601323960132396570558Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,thiol:disulfide interChange protein DsbE1e-37155
NC_017046:4025998:403350240335024034059558Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome C-type biogenesis protein1e-37155
NC_017046:2324554:234551323455132346070558Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome C-type biogenesis protein1e-37155
NC_016863:3967156:397466039746603975217558Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1heme lyase disulfide oxidoreductase1e-37155
NC_016863:2324293:234817823481782348735558Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1heme lyase disulfide oxidoreductase1e-37155
NC_016860:4110968:411847241184724119029558Salmonella enterica subsp. enterica serovar Typhimurium strthiol:disulfide interchange protein DsbE1e-37155
NC_016860:2323017:234397623439762344533558Salmonella enterica subsp. enterica serovar Typhimurium strthiol:disulfide interchange protein DsbE1e-37155
NC_016857:4025767:403467540346754035232558Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74heme lyase disulfide oxidoreductase1e-37155
NC_016857:2325190:234614923461492346706558Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74heme lyase disulfide oxidoreductase1e-37155
NC_003197:2327474:234843323484332348990558Salmonella typhimurium LT2, complete genomeheme lyase/disulfide oxidoreductase1e-37155
NC_011083:4020000:402756840275684028125558Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,thiol:disulfide interChange protein DsbE1e-37155
NC_016810:2325190:234614923461492346706558Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome C-type biogenesis protein1e-37155
NC_016810:4027170:403467440346744035231558Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome C-type biogenesis protein1e-37155
NC_016856:2379027:239998623999862400543558Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sheme lyase/disulfide oxidoreductase1e-37155
NC_016856:4019549:402705340270534027610558Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sheme lyase disulfide oxidoreductase1e-37155
NC_015761:3698520:370556937055693706126558Salmonella bongori NCTC 12419, complete genomethiol:disulfide interchange protein3e-37154
NC_015761:2227500:223118322311832231740558Salmonella bongori NCTC 12419, complete genomethiol:disulfide interchange protein3e-37154
NC_011149:2294500:229991622999162300473558Salmonella enterica subsp. enterica serovar Agona str. SL483,thiol:disulfide interChange protein DsbE3e-37154
NC_017075:2293209:231402823140282314555528Rubrivivax gelatinosus IL144, complete genomecytochrome c-type biogenesis protein CcmG8e-37153
NC_011283:2323687:232703923270392327593555Klebsiella pneumoniae 342 chromosome, complete genomethiol:disulfide interchange protein DsbE5e-36150
NC_016845:3024041:304466830446683045222555Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,heme lyase/disulfide oxidoreductase (thiol:disulfide interchange protein)7e-36149
NC_009648:2252757:227470722747072275261555Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeheme lyase/disulfide oxidoreductase (thiol:disulfide interchange protein)7e-36149
NC_012731:2974745:298904029890402989594555Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeheme lyase/disulfide oxidoreductase7e-36149
NC_014306:3524980:352442635244263524983558Erwinia billingiae Eb661, complete genomeCytochrome c biogenesis protein (Thiol:disulfide interchange protein)2e-35148
NC_015061:1251905:127868112786811279232552Rahnella sp. Y9602 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE2e-35148
NC_015458:1938860:195296019529601953484525Pusillimonas sp. T7-7 chromosome, complete genomeperiplasmic protein thiol--disulfide oxidoreductase DsbE6e-35146
NC_016818:1291665:131197413119741312525552Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily7e-35146
NC_015572:2541968:255852725585272559066540Methylomonas methanica MC09 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE4e-34144
NC_008344:49039:581685816858692525Nitrosomonas eutropha C91, complete genomeperiplasmic protein thiol--disulphide oxidoreductase DsbE5e-34143
NC_010170:3944228:398406739840673984594528Bordetella petrii, complete genomethiol:disulfide interchange protein DsbE3e-30131
NC_009654:3849774:385458538545853855094510Marinomonas sp. MWYL1, complete genomeperiplasmic protein thiol--disulphide oxidoreductase DsbE3e-30131
NC_016147:1825827:182778818277881828321534Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeprotein thiol/disulfide oxidoreductase DsbE4e-29127
NC_015497:1287877:130212413021241302696573Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeperiplasmic protein thiol/disulfide oxidoreductase DsbE9e-29126
NC_020541:2551539:255352125535212554063543Rhodanobacter sp. 2APBS1, complete genomeperiplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily3e-24111
NC_020300:131782:131196131196131801606Bartonella australis Aust/NH1, complete genomethiol:disulfide interchange protein1e-22105
NC_015387:1965711:198528519852851985815531Marinithermus hydrothermalis DSM 14884 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen7e-22103
NC_008095:3785848:380578138057813806332552Myxococcus xanthus DK 1622, complete genomethiol:disulfide interchange protein DsbE1e-21102
NC_007799:284058:290760290760291257498Ehrlichia chaffeensis str. Arkansas, complete genomeputative thiol:disulfide oxidoreductase8e-2096.7
NC_018643:1309804:131451513145151315033519Alpha proteobacterium HIMB5 chromosome, complete genomeRedoxin1e-1996.3
NC_015186:2884866:288558128855812886144564Acidiphilium multivorum AIU301, complete genomecytochrome c-type biogenesis protein CcmG2e-1995.5
NC_016943:1810417:181836918183691818953585Blastococcus saxobsidens DD2, complete genomeperiplasmic thioredoxin of cytochrome c-type biogenesis1e-1892.8
NC_020126:6019850:602186860218686022428561Myxococcus stipitatus DSM 14675, complete genomethiol:disulfide interchange protein DsbE2e-1892
NC_014623:4426416:444690744469074447461555Stigmatella aurantiaca DW4/3-1 chromosome, complete genomethiol:disulfide interchange protein dsbe9e-1889.7
NC_020210:788639:8155698155698166901122Geobacillus sp. GHH01, complete genomehypothetical protein3e-1374.7
NC_014831:1906691:192029719202971920908612Thermaerobacter marianensis DSM 12885 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen1e-1273.2
NC_016593:981500:9924499924499936481200Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completecytochrome c biogenesis protein3e-1271.6
NC_015161:927152:942257942257942847591Deinococcus proteolyticus MRP chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen8e-1166.6
NC_011979:1683964:168721816872181687721504Geobacter sp. FRC-32, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen8e-1166.6
NC_019902:498500:516938516938517450513Thioalkalivibrio nitratireducens DSM 14787, complete genomesuppressor for copper-sensitivity D, putative9e-1166.6
NC_011899:1926000:194284319428431943379537Halothermothrix orenii H 168, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen1e-1066.2
NC_010741:107370:108320108320108922603Treponema pallidum subsp. pallidum SS14, complete genomepossible thioredoxin2e-1065.9
NC_000919:107373:108323108323108925603Treponema pallidum subsp. pallidum str. Nichols, complete genomethioredoxin, putative2e-1065.9
NC_016844:107382:108332108332108934603Treponema pallidum subsp. pallidum DAL-1 chromosome, completeTlpA family thioredoxin-disulfide reductase2e-1065.9
NC_017268:107387:108382108382108939558Treponema pallidum subsp. pallidum str. Chicago chromosome,thioredoxin2e-1065.9
NC_021508:107384:108334108334108936603Treponema pallidum subsp. pallidum SS14, complete genomeTlpA family thioredoxin-disulfide reductase2e-1065.9
NC_007677:3469661:348035334803533480946594Salinibacter ruber DSM 13855, complete genomecytochrome c biogenesis protein, thiol:disulfide interchange protein9e-1063.2
NC_005945:3359598:337789633778963378471576Bacillus anthracis str. Sterne, complete genomeahpC/TSA family protein2e-0962.4
NC_013422:2004478:2020706202070620220491344Halothiobacillus neapolitanus c2, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen2e-0962
NC_011979:2969969:299568529956852996191507Geobacter sp. FRC-32, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen2e-0962
NC_014378:4428:158981589816425528Acetohalobium arabaticum DSM 5501 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen2e-0962
NC_012918:1660477:168828416882841688790507Geobacter sp. M21 chromosome, complete genomealkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen9e-0959.7
NC_006510:2110430:211863121186312119170540Geobacillus kaustophilus HTA426, complete genomethiol:disulfide interchange protein (thioredoxin)9e-0959.7
NC_014915:2092678:210054221005422101096555Geobacillus sp. Y412MC52 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen1e-0859.7
NC_013411:2951559:296061029606102961164555Geobacillus sp. Y412MC61, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen1e-0859.7
NC_013889:216829:231766231766232305540Thioalkalivibrio sp. K90mix chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen1e-0859.3
NC_017955:1611037:161840916184091618900492Modestobacter marinus, complete genomeRedoxin1e-0859.3
NC_017030:7557295:757778475777847578362579Corallococcus coralloides DSM 2259 chromosome, complete genomethiol-disulfide oxidoreductase resA2e-0858.9
NC_020126:2979959:298103229810322981610579Myxococcus stipitatus DSM 14675, complete genomethiol-disulfide oxidoreductase resA2e-0858.5
NC_020126:2687627:268848226884822689039558Myxococcus stipitatus DSM 14675, complete genomethioredoxin family protein2e-0858.5
NC_013205:1123280:116223811622381162819582Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen4e-0857.8
NC_014960:2059012:207891320789132079449537Anaerolinea thermophila UNI-1, complete genomethiol-disulfide oxidoreductase5e-0857.4
NC_014315:1169910:117141611714161171934519Nitrosococcus watsoni C-113 chromosome, complete genomeredoxin domain-containing protein7e-0857
NC_015458:1938860:195100219510021951505504Pusillimonas sp. T7-7 chromosome, complete genomeredoxin domain-containing protein2e-0755.5
NC_015957:527777:544211544211544828618Streptomyces violaceusniger Tu 4113 chromosome, complete genomeRedoxin domain-containing protein2e-0755.5
NC_015577:786155:787606787606788154549Treponema azotonutricium ZAS-9 chromosome, complete genomethiol-disulfide oxidoreductase ResA2e-0755.1
NC_007760:2094746:212053421205342121055522Anaeromyxobacter dehalogenans 2CP-C, complete genomecytochrome c biogenesis protein, thiol-disulfide interchange protein3e-0754.7
NC_017030:2299592:232353423235342324118585Corallococcus coralloides DSM 2259 chromosome, complete genomethioredoxin family protein5e-0753.9
NC_013730:933089:942089942089942676588Spirosoma linguale DSM 74, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen7e-0753.5
NC_015186:2884866:289751328975132898073561Acidiphilium multivorum AIU301, complete genomethiol--disulfide interchange protein8e-0753.5
NC_002947:4805060:481016048101604810996837Pseudomonas putida KT2440, complete genomethiol:disulfide interchange protein dsbE, putative4e-0651.2