Pre_GI: BLASTP Hits

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Query: NC_009092:1684467:1702337 Shewanella loihica PV-4, complete genome

Start: 1702337, End: 1703086, Length: 750

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008700:2451798:247400124740012474789789Shewanella amazonensis SB2B, complete genomeanti-ECFsigma factor, ChrR7e-37154
NC_004459:1794540:181057718105771811245669Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative transcriptional activator8e-26117
NC_012880:1711062:172424417242441724621378Dickeya dadantii Ech703, complete genomeanti-ECFsigma factor, ChrR2e-0652.8