Pre_GI: BLASTP Hits

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Query: NC_009092:1504363:1574648 Shewanella loihica PV-4, complete genome

Start: 1574648, End: 1574980, Length: 333

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007912:2768363:278560327856032785968366Saccharophagus degradans 2-40, complete genomehypothetical protein4e-1683.2
NC_015733:4253961:425575542557554256087333Pseudomonas putida S16 chromosome, complete genomeflagellar hook-basal body protein FliE1e-1272
NC_009138:1843998:189279618927961893155360Herminiimonas arsenicoxydans, complete genomeflagellar biosynthesis; basal-body component FliE1e-1168.9
NC_007508:2277640:227937822793782279749372Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellar hook-basal body complex protein FliE3e-1167
NC_008340:774206:791019791019791345327Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar hook-basal body complex subunit FliE1e-1065.1
NC_015138:4905935:490781949078194908136318Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar hook-basal body complex subunit FliE2e-0960.8
NC_012912:1788308:179344417934441793758315Dickeya zeae Ech1591, complete genomeflagellar hook-basal body complex subunit FliE3e-0960.5
NC_013939:492959:496942496942497244303Deferribacter desulfuricans SSM1, complete genomeflagellar hook-basal body complex protein FliE5e-0959.7
NC_014500:3023762:305122430512243051538315Dickeya dadantii 3937 chromosome, complete genomeflagellar hook-basal body complex protein fliE3e-0857
NC_013592:1730505:173428717342871734601315Dickeya dadantii Ech586, complete genomeflagellar hook-basal body complex subunit FliE4e-0856.6
NC_009831:66518:869388693887276339Shewanella sediminis HAW-EB3, complete genomeflagellar hook-basal body complex subunit FliE4e-0856.6
NC_014562:1844268:186503718650371865348312Pantoea vagans C9-1 chromosome, complete genomePutative lagellar hook-basal body complex protein fliE5e-0856.6
NC_016816:1912366:191909719190971919408312Pantoea ananatis LMG 5342, complete genomeflagellar hook-basal body complex subunit FliE5e-0856.6
NC_010718:1454087:146240614624061462696291Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar hook-basal body complex subunit FliE6e-0856.2
NC_012880:1765920:182147218214721821807336Dickeya dadantii Ech703, complete genomeflagellar hook-basal body complex subunit FliE1e-0755.5
NC_014837:2586870:260221126022112602522312Pantoea sp. At-9b chromosome, complete genomeflagellar hook-basal body complex subunit FliE1e-0755.5
NC_015224:2017781:202285120228512023168318Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar hook-basal body protein FliE2e-0754.7
NC_008800:2695977:273047727304772730788312Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar hook-basal body protein FliE2e-0754.7
NC_009664:533021:554308554308554745438Kineococcus radiotolerans SRS30216, complete genomeflagellar hook-basal body complex subunit FliE3e-0753.5
NC_014377:1060000:107341610734161073700285Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar hook-basal body complex subunit FliE5e-0753.1
NC_015422:2806832:283850128385012838809309Alicycliphilus denitrificans K601 chromosome, complete genomeflagellar hook-basal body complex protein fliE5e-0753.1
NC_011899:1807365:181086218108621811164303Halothermothrix orenii H 168, complete genomeflagellar hook-basal body complex subunit FliE6e-0753.1
NC_009486:1403175:140704014070401407324285Thermotoga petrophila RKU-1 chromosome, complete genomeflagellar hook-basal body complex subunit FliE7e-0752.8
NC_010483:1467616:147148114714811471765285Thermotoga sp. RQ2, complete genomeflagellar hook-basal body complex subunit FliE7e-0752.8
NC_013642:1425795:143129214312921431576285Thermotoga naphthophila RKU-10, complete genomeflagellar hook-basal body complex subunit FliE7e-0752.8
NC_014652:628435:635663635663635977315Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar hook-basal body complex subunit flie2e-0651.6
NC_012917:2921932:294337829433782943692315Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar hook-basal body complex subunit FliE2e-0651.6
NC_013943:2431643:244624424462442446549306Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeflagellar hook-basal body complex subunit FliE1e-0651.6
NC_016514:2950860:297587229758722976183312Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar hook-basal body complex protein fliE2e-0651.2
NC_015422:3513689:352353035235303523838309Alicycliphilus denitrificans K601 chromosome, complete genomeflagellar hook-basal body complex protein fliE3e-0650.4
NC_019978:625476:631438631438631737300Halobacteroides halobius DSM 5150, complete genomeflagellar hook-basal body complex protein FliE3e-0650.4
NC_014721:434501:450999450999451313315Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeflagellar hook-basal body complex subunit flie4e-0650.1
NC_009778:1222273:122728712272871227598312Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0650.1
NC_004547:1970686:197267119726711972985315Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar basal body protein6e-0649.7