Pre_GI: BLASTP Hits

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Query: NC_009092:1504363:1559481 Shewanella loihica PV-4, complete genome

Start: 1559481, End: 1560185, Length: 705

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009997:3661083:366218636621863662860675Shewanella baltica OS195, complete genomeflagellar L-ring protein3e-93341
NC_015424:2917817:292204729220472922721675Aeromonas veronii B565 chromosome, complete genomeflagellar L-ring protein2e-50198
NC_009439:3104000:312730831273083128030723Pseudomonas mendocina ymp, complete genomeflagellar basal body L-ring protein6e-42171
NC_015733:4253961:427541442754144276109696Pseudomonas putida S16 chromosome, complete genomeflagellar basal body L-ring protein3e-41168
NC_009831:66518:747397473975401663Shewanella sediminis HAW-EB3, complete genomeflagellar L-ring protein7e-34144
NC_010515:1678487:168122316812231681888666Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar L-ring protein1e-30133
NC_015850:1497998:150083615008361501573738Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar L-ring protein FlgH8e-30130
NC_008011:924392:926204926204926896693Lawsonia intracellularis PHE/MN1-00, complete genomeFlagellar basal body L-ring protein7e-25114
NC_020911:2921925:298362829836282984269642Octadecabacter antarcticus 307, complete genomeflagellar basal-body L-ring protein FlgH2e-24112
NC_013892:1890500:189053318905331891285753Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar basal-body outer-membrane L (lipopolysaccharide layer) ring protein4e-24111
NC_016893:43234:513545135452040687Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar protein of basal-body outer-membrane L ring1e-21103
NC_007759:1356439:137230413723041373020717Syntrophus aciditrophicus SB, complete genomeflagellar L-ring protein2e-21102
NC_012880:1765920:181300218130021813688687Dickeya dadantii Ech703, complete genomeflagellar L-ring protein4e-21101
NC_004344:26828:502055020550891687Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein6e-1787.8
NC_012440:659646:683725683725684180456Persephonella marina EX-H1, complete genomeflagellar L-ring protein FlgH4e-1684.7
NC_007645:4195500:423356342335634234141579Hahella chejuensis KCTC 2396, complete genomeFlagellar basal body L-ring protein2e-1479
NC_015437:2164997:216616421661642166769606Selenomonas sputigena ATCC 35185 chromosome, complete genomeflagellar L-ring protein1e-1273.6
NC_014032:3330596:335202733520273352674648Salinibacter ruber M8 chromosome, complete genomeflagellar L-ring protein3e-1272
NC_015379:2999965:302031930203193020897579Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative flagellar L-ring protein 13e-1168.9
NC_015186:2129046:214073021407302141491762Acidiphilium multivorum AIU301, complete genomeflagellar L-ring protein7e-1064.3
NC_008209:253663:257075257075257806732Roseobacter denitrificans OCh 114, complete genomeflagellar L-ring protein FlgH, putative2e-0858.9
NC_010003:335348:352209352209352844636Petrotoga mobilis SJ95, complete genomeflagellar basal body L-ring protein-like protein4e-0858.2