Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:1263964:1287898 Shewanella loihica PV-4, complete genome

Start: 1287898, End: 1290564, Length: 2667

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:1309724:1331282133128213340022721Shewanella pealeana ATCC 700345, complete genomeBeta-N-acetylhexosaminidase01106
NC_008700:1115436:1140745114074511433992655Shewanella amazonensis SB2B, complete genomeBeta-N-acetylhexosaminidase01093
NC_010506:774455:7893247893247918852562Shewanella woodyi ATCC 51908, complete genomeBeta-N-acetylhexosaminidase0789
NC_016613:1877688:1892627189262718952932667Vibrio sp. EJY3 chromosome 1, complete sequencebeta-hexosaminidase0667
NC_009348:3029963:3057104305710430594492346Aeromonas salmonicida subsp. salmonicida A449, complete genomebeta-N-acetylhexosaminidase3e-117423
NC_013730:1572889:1578696157869615812542559Spirosoma linguale DSM 74, complete genomeBeta-N-acetylhexosaminidase3e-95350
NC_014933:602312:6199366199366222512316Bacteroides helcogenes P 36-108 chromosome, complete genomeBeta-N-acetylhexosaminidase1e-42175
NC_014734:1428282:1448766144876614511022337Paludibacter propionicigenes WB4 chromosome, complete genomebeta-N-acetylhexosaminidase2e-42174
NC_016776:3626541:3636251363625136385662316Bacteroides fragilis 638R, complete genomeputative exported glycosyl hydrolase8e-42172
NC_009615:1469642:1477037147703714793882352Parabacteroides distasonis ATCC 8503 chromosome, complete genomebeta-N-acetylhexosaminidase7e-41169
NC_003228:3582728:3590784359078435930992316Bacteroides fragilis NCTC 9343, complete genomeputative exported glycosyl hydrolase2e-40168
NC_015703:4483500:4485597448559744872611665Runella slithyformis DSM 19594 chromosome, complete genomebeta-N-acetylhexosaminidase1e-37159
NC_015500:1923514:1923514192351419250701557Treponema brennaborense DSM 12168 chromosome, complete genomeBeta-N-acetylhexosaminidase4e-37157
NC_017186:7333732:7354147735414773559071761Amycolatopsis mediterranei S699 chromosome, complete genomebeta-N-acetylhexosaminidase3e-36154
NC_014318:7333688:7354103735410373558631761Amycolatopsis mediterranei U32 chromosome, complete genomebeta-N-acetylhexosaminidase3e-36154
NC_015846:445000:4582634582634605902328Capnocytophaga canimorsus Cc5 chromosome, complete genomebeta-N-acetylhexosaminidase3e-36154
NC_007705:1828375:1848420184842018508672448Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomebeta-hexosaminidase1e-35152
NC_013947:6221877:6237333623733362389731641Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeBeta-N-acetylhexosaminidase3e-35150
NC_019960:1272956:1284684128468412863121629Prevotella dentalis DSM 3688 chromosome 1, complete sequenceN-acetyl-beta-hexosaminidase3e-34147
NC_016776:3626541:3642198364219836438471650Bacteroides fragilis 638R, complete genomeputative exported hexosaminidase1e-32142
NC_003228:3582728:3596731359673135983801650Bacteroides fragilis NCTC 9343, complete genomeputative exported hexosaminidase1e-32142
NC_014318:5586287:5617303561730356189011599Amycolatopsis mediterranei U32 chromosome, complete genomebeta-N-acetylhexosaminidase2e-32141
NC_010723:1465097:1465097146509714667281632Clostridium botulinum E3 str. Alaska E43, complete genomebeta-hexosaminidase3e-31137
NC_013521:940495:9421689421689440121845Sanguibacter keddieii DSM 10542, complete genomeN-acetyl-beta-hexosaminidase5e-31137
NC_010655:2000025:2021876202187620235191644Akkermansia muciniphila ATCC BAA-835, complete genomeBeta-N-acetylhexosaminidase6e-29130
NC_019904:5130458:5146382514638251479891608Echinicola vietnamensis DSM 17526 chromosome, complete genomeN-acetyl-beta-hexosaminidase1e-28129
NC_012483:30784:3832038320403802061Acidobacterium capsulatum ATCC 51196, complete genomeglycosyl hydrolase, family 201e-26122
NC_004663:1983439:1994978199497819965371560Bacteroides thetaiotaomicron VPI-5482, complete genomebeta-hexosaminidase precursor5e-26120
NC_016602:2292518:2305685230568523081352451Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceN-acetyl-beta-hexosaminidase1e-1689
NC_013947:373862:3945733945733960841512Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeGlycoside hydrolase family 20, catalytic core7e-1583.6
NC_016938:193000:2099932099932110361044Melissococcus plutonius DAT561 chromosome 1, complete genomelacto-N-biosidase3e-1377.8
NC_013406:3672857:3672857367285736771854329Paenibacillus sp. Y412MC10 chromosome, complete genomebeta-N-acetylhexosaminidase2e-1171.6
NC_016776:844641:8630958630958650561962Bacteroides fragilis 638R, complete genomeputative glycosyl hydrolase, beta-N-acetylhexosaminidase8e-0860.1
NC_003228:793846:8123008123008142611962Bacteroides fragilis NCTC 9343, complete genomeputative glycosyl hydrolase, beta-N-acetylhexosaminidase8e-0860.1