Pre_GI: BLASTP Hits

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Query: NC_009078:3087759:3092256 Burkholderia pseudomallei 1106a chromosome II, complete sequence

Start: 3092256, End: 3092861, Length: 606

Host Lineage: Burkholderia pseudomallei; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from liver abscess from a 23-year old female patient in Thailand in 1993. This species is an opportunistic pathogen and can cause pneumonia, bacteremia, and melioidosis. It is normally found in terrestrial environments and has been recovered from rice paddies and moist tropical soil. It is endemic in Asia and Australia, but can be found in other parts of the world. The organism can exist intracellularly and can spread through the bloodstream (bacteremia)




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009075:3113393:311930131193013119906606Burkholderia pseudomallei 668 chromosome II, complete sequenceRNA polymerase sigma-70 factor, family2e-88325
NC_008784:1151305:115718811571881157793606Burkholderia mallei SAVP1 chromosome I, complete sequenceRNA polymerase sigma-70 factor, TIGR02943 family5e-88323
NC_008835:1483237:148672614867261487331606Burkholderia mallei NCTC 10229 chromosome I, complete sequenceputative sigma-70 factor5e-88323
NC_009079:2339756:234409823440982344703606Burkholderia mallei NCTC 10247 chromosome I, complete sequenceRNA polymerase sigma-70 factor, TIGR02943 family5e-88323
NC_006349:2311817:231677523167752317380606Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceRNA polymerase sigma-70 factor5e-88323
NC_006351:3159630:316471531647153165320606Burkholderia pseudomallei K96243 chromosome 2, complete sequenceRNA polymerase sigma-70 factor1e-87322
NC_007435:1825741:183086818308681831473606Burkholderia pseudomallei 1710b chromosome II, complete sequenceRNA polymerase sigma-70 factor1e-87322
NC_007650:2901751:290633829063382907165828Burkholderia thailandensis E264 chromosome II, complete sequencesigma-70 factor, putative9e-88322
NC_008048:2838769:284525328452532845861609Sphingopyxis alaskensis RB2256, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-29128
NC_015723:2550000:255027725502772550921645Cupriavidus necator N-1 chromosome 2, complete sequenceDNA-directed RNA polymerase sigma-24 subunit RpoE9e-28123
NC_010524:2761394:276364027636402764209570Leptothrix cholodnii SP-6, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-21100
NC_008767:2160000:216543821654382166025588Neisseria meningitidis FAM18, complete genomeputative ECF-family RNA polymerase sigma factor2e-1995.9
NC_017512:2209000:221186422118642212451588Neisseria meningitidis WUE 2594, complete genomeputative ECF-family RNA polymerase sigma factor2e-1995.9
NC_017511:1812000:181711118171111817698588Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRNA polymerase sigma factor5e-1994.4
NC_011035:1908000:191326819132681913855588Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeRNA polymerase sigma factor5e-1994.4
NC_002946:1902642:191875319187531919340588Neisseria gonorrhoeae FA 1090, complete genomeRNA polymerase sigma-70 factor5e-1994.4
NC_017516:2220000:222537622253762225963588Neisseria meningitidis H44/76 chromosome, complete genomeigma-70 family RNA polymerase sigma factor2e-1892
NC_015942:763500:780566780566781198633Acidithiobacillus ferrivorans SS3 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-1374.7
NC_015850:1060000:106986110698611070457597Acidithiobacillus caldus SM-1 chromosome, complete genomeRNA polymerase sigma-70 factor3e-0961.6
NC_012483:1408500:143868014386801439267588Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0653.1