Pre_GI: BLASTP Hits

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Query: NC_009076:75535:78299 Burkholderia pseudomallei 1106a chromosome I, complete sequence

Start: 78299, End: 78814, Length: 516

Host Lineage: Burkholderia pseudomallei; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from liver abscess from a 23-year old female patient in Thailand in 1993. This species is an opportunistic pathogen and can cause pneumonia, bacteremia, and melioidosis. It is normally found in terrestrial environments and has been recovered from rice paddies and moist tropical soil. It is endemic in Asia and Australia, but can be found in other parts of the world. The organism can exist intracellularly and can spread through the bloodstream (bacteremia).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007651:72952:757787577876293516Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma-70 factor, ECF subfamily5e-72269
NC_010084:3115:924292429760519Burkholderia multivorans ATCC 17616 chromosome 1, completeECF subfamily RNA polymerase sigma-24 factor1e-57221
NC_010804:52000:665466654667064519Burkholderia multivorans ATCC 17616 chromosome 1, completeECF subfamily RNA polymerase sigma-70 factor1e-57221
NC_012724:1:114171141711932516Burkholderia glumae BGR1 chromosome 1, complete genomeRNA polymerase sigma-70 factor, ECF subfamily protein2e-57221
NC_008314:1955793:196331919633191963837519Ralstonia eutropha H16 chromosome 2, complete sequenceDNA-directed RNA polymerase sigma subunit PrtI (ECF sigma factor)2e-36151
NC_009720:251703:267010267010267516507Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-2099
NC_009720:2945655:295479629547962955302507Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-2099
NC_011894:2811573:282499228249922825498507Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1892.4
NC_010172:1522707:154378715437871544350564Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family8e-1889.7
NC_010170:3908500:391055939105593911074516Bordetella petrii, complete genomeRNA polymerase sigma factor3e-1787.8
NC_011758:369704:379094379094379606513Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1787.8
NC_014910:2015627:201649420164942017018525Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family3e-1580.9
NC_016622:1599681:160103816010381601589552Azospirillum lipoferum 4B, complete genomeECF family sigma factor6e-1580.1
NC_011992:1318691:131869113186911319206516Acidovorax ebreus TPSY, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1374.7
NC_003909:1205605:122684212268421227327486Bacillus cereus ATCC 10987, complete genomeRNA polymerase sigma-70 factor1e-1272.8
NC_012811:959725:963246963246963947702Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase ECF-type sigma factor1e-1272.4
NC_014932:1232346:130281113028111303365555Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma factor, ecr subfamily3e-1271.2
NC_015953:4908069:492497149249714925813843Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-1271.2
NC_007761:781210:782989782989783618630Rhizobium etli CFN 42, complete genomeRNA polymerase sigma factor protein (sigma-24)1e-1169.3
NC_013956:1762171:180161418016141802192579Pantoea ananatis LMG 20103 chromosome, complete genomeRpoE1e-1168.9
NC_011901:491783:492538492538493095558Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeECF subfamily RNA polymerase sigma-24 subunit3e-1168.2
NC_003450:788000:804408804408805028621Corynebacterium glutamicum ATCC 13032, complete genomeRNA polymerase sigma factor RpoE2e-1168.2
NC_009342:951761:964659964659965279621Corynebacterium glutamicum R chromosome, complete genomeRNA polymerase sigma factor RpoE2e-1168.2
NC_009437:2367842:237191723719172372468552Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeRNA polymerase sigma factor SigY5e-1167
NC_015949:1180755:118484711848471185398552Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-1167
NC_010511:7553703:757897775789777579660684Methylobacterium sp. 4-46 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor6e-1166.6
NC_004547:2285092:229013322901332290600468Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative RNA polymerase sigma factor7e-1166.6
NC_012034:1783912:178800617880061788557552Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1066.2
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H8e-1166.2
NC_014657:1518721:152332215233221523873552Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily8e-1166.2
NC_014392:969498:100562310056231006174552Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1065.9
NC_014721:1777644:178173617817361782287552Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily2e-1065.5
NC_014500:2479814:249455224945522495001450Dickeya dadantii 3937 chromosome, complete genomeRNA polymerase sigma-54 factor rpoN2e-1065.5
NC_010505:5967324:597965759796575980331675Methylobacterium radiotolerans JCM 2831, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1065.5
NC_009436:3367194:338976233897623390211450Enterobacter sp. 638, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-1065.1
NC_010510:139685:160605160605161294690Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.1
NC_009720:2945655:296366729636672964185519Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-1065.1
NC_009720:251703:259356259356259874519Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-1065.1
NC_016514:3573400:360540636054063605996591Enterobacter cloacae EcWSU1 chromosome, complete genomeRNA polymerase sigma-E factor5e-1063.9
NC_020301:1486695:150583015058301506384555Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeRNA polymerase sigma factor5e-1063.9
NC_014652:1032711:107042510704251070976552Caldicellulosiruptor hydrothermalis 108 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily8e-1063.2
NC_011894:4911500:492350949235094924204696Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1063.2
NC_012846:1888000:190443319044331904987555Bartonella grahamii as4aup, complete genomeRNA polymerase sigma factor1e-0962.8
NC_010161:2050816:207017720701772070731555Bartonella tribocorum CIP 105476, complete genomeRNA polymerase sigma factor1e-0962.4
NC_005956:1572500:159013115901311590685555Bartonella henselae str. Houston-1, complete genomeRNA polymerase sigma-70 factor2e-0961.6
NC_020300:1344453:136080613608061361360555Bartonella australis Aust/NH1, complete genomeRNA polymerase sigma factor3e-0961.6
NC_014720:1161841:117795711779571178508552Caldicellulosiruptor kronotskyensis 2002 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily3e-0961.2
NC_006510:1731939:175291017529101753395486Geobacillus kaustophilus HTA426, complete genomeDNA-directed RNA polymerase ECF-type sigma factor4e-0960.8
NC_015660:1918307:191991019199101920395486Geobacillus thermoglucosidasius C56-YS93 chromosome, completeECF subfamily RNA polymerase sigma-24 subunit9e-0959.7
NC_014650:1893758:189647118964711896956486Geobacillus sp. Y4.1MC1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit9e-0959.7
NC_016631:3114000:313063631306363131205570Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0859.3
NC_020541:1717140:173499017349901735481492Rhodanobacter sp. 2APBS1, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0859.3
NC_009668:1726000:173066117306611731212552Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceECF subfamily RNA polymerase sigma-24 factor1e-0858.9
NC_008095:5312926:531594253159425316469528Myxococcus xanthus DK 1622, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0858.9
NC_011758:369704:389938994459561Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.9
NC_010320:671699:672453672453672983531Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase sigma factor SigY2e-0858.9
NC_012811:139498:143577143577144257681Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.2
NC_011757:1067543:107244910724491073129681Methylobacterium chloromethanicum CM4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.2
NC_019897:3810000:385687138568713857380510Thermobacillus composti KWC4 chromosome, complete genomeSigM family RNA polymerase sigma factor3e-0857.8
NC_016109:8664974:868860186886018689278678Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor4e-0857.8
NC_016109:62000:940019400194678678Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor4e-0857.8
NC_009668:1726000:173529217352921735792501Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceECF subfamily RNA polymerase sigma-24 factor1e-0755.5
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor2e-0755.1
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor2e-0754.7
NC_007951:2206263:220626322062632207000738Burkholderia xenovorans LB400 chromosome 1, complete sequenceSigma-24 (FecI)3e-0754.3
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor4e-0754.3
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor8e-0753.1
NC_010172:480000:497599497599498279681Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0652.8
NC_011969:5063283:507947350794735080006534Bacillus cereus Q1 chromosome, complete genomeRNA polymerase sigma factor1e-0652.8
NC_008600:5113765:512978451297845130407624Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-0652
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor2e-0652
NC_008358:263458:267448267448268089642Hyphomonas neptunium ATCC 15444, complete genomeRNA polymerase sigma-70 factor, ECF family2e-0652
NC_006274:5155395:517165151716515172184534Bacillus cereus E33L, complete genomeRNA polymerase sigma-70 factor2e-0652
NC_005957:5091150:510720551072055107735531Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma-70 factor2e-0651.6
NC_012472:5126186:514219551421955142722528Bacillus cereus 03BB102, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-0651.6
NC_016779:5079460:509547950954795096006528Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor2e-0651.6
NC_014335:5038601:505489950548995055426528Bacillus cereus biovar anthracis str. CI chromosome, completeRNA polymerase sigma-70 factor2e-0651.6
NC_014640:2693060:269731826973182697830513Achromobacter xylosoxidans A8 chromosome, complete genomeRNA polymerase sigma factor FecI3e-0651.2
NC_016906:4123000:413998141399814140532552Gordonia polyisoprenivorans VH2 chromosome, complete genomeRNA polymerase sigma factor4e-0650.8
NC_016799:267310:284174284174284740567Corynebacterium diphtheriae 31A chromosome, complete genomeECF family sigma factor C6e-0650.1
NC_016783:201066:218683218683219249567Corynebacterium diphtheriae INCA 402 chromosome, complete genomeECF-family sigma factor C6e-0650.1
NC_017030:9818064:981751098175109818067558Corallococcus coralloides DSM 2259 chromosome, complete genomeECF subfamily RNA polymerase sigma factor7e-0650.1
NC_016802:221343:238193238193238759567Corynebacterium diphtheriae HC02 chromosome, complete genomeECF-family sigma factor C7e-0650.1