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Query: NC_009012:3354477 Clostridium thermocellum ATCC 27405, complete genome

Start: 3354477, End: 3401249, Length: 46773

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009012:3324000*3324000334828724288Clostridium thermocellum ATCC 27405, complete genome010970BLASTN svgBLASTP svg
NC_009012:23565002356500237463518136Clostridium thermocellum ATCC 27405, complete genome06552BLASTN svgBLASTP svg
NC_009012:1857845*1857845188009922255Clostridium thermocellum ATCC 27405, complete genome02755BLASTN svgBLASTP svg
NC_011898:85189285189287229120400Clostridium cellulolyticum H10, complete genome1e-25127BLASTN svgBLASTP svg
NC_014150:27980002798000282110323104Brachyspira murdochii DSM 12563 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_011898:25092672509267253459925333Clostridium cellulolyticum H10, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014720:2420455*2420455245425933805Caldicellulosiruptor kronotskyensis 2002 chromosome, complete6e-0661.9BLASTN svgBLASTP svg