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Query: NC_009012:3324000 Clostridium thermocellum ATCC 27405, complete genome

Start: 3324000, End: 3348287, Length: 24288

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009012:3354477*3354477340124946773Clostridium thermocellum ATCC 27405, complete genome05854BLASTN svgBLASTP svg
NC_009012:23565002356500237463518136Clostridium thermocellum ATCC 27405, complete genome04772BLASTN svgBLASTP svg
NC_009012:27067552706755272959922845Clostridium thermocellum ATCC 27405, complete genome04575BLASTN svgBLASTP svg
NC_020134:13283021328302134815619855Clostridium stercorarium subsp. stercorarium DSM 8532, complete02551BLASTN svgBLASTP svg
NC_020134:134875*13487515980324929Clostridium stercorarium subsp. stercorarium DSM 8532, complete01384BLASTN svgBLASTP svg
NC_009012:1857845*1857845188009922255Clostridium thermocellum ATCC 27405, complete genome01201BLASTN svgBLASTP svg
NC_020134:19415231941523198006638544Clostridium stercorarium subsp. stercorarium DSM 8532, complete0841BLASTN svgBLASTP svg
NC_014328:12631391263139128186118723Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004578:38173303817330384200124672Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014394:80873480873483220323470Gallionella capsiferriformans ES-2 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg