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Query: NC_009012:3224000 Clostridium thermocellum ATCC 27405, complete genome

Start: 3224000, End: 3242687, Length: 18688

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_019970:81391781391783706923153Thermoanaerobacterium thermosaccharolyticum M0795, complete genome2e-28135BLASTN svgBLASTP svg
NC_021182:16549031654903167678221880Clostridium pasteurianum BC1, complete genome2e-19105BLASTN svgBLASTP svg
NC_003909:4831000*4831000485077119772Bacillus cereus ATCC 10987, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_011653:1226035*1226035125859932565Thermosipho africanus TCF52B, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_013406:303218*30321834059037373Paenibacillus sp. Y412MC10 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_012440:1215838*1215838124846532628Persephonella marina EX-H1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007797:1016456*1016456103559919144Anaplasma phagocytophilum HZ, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_002946:618439*61843964067022232Neisseria gonorrhoeae FA 1090, complete genome2e-0661.9BLASTN svgBLASTP svg