Query: NC_009012:2927793 Clostridium thermocellum ATCC 27405, complete genome
Start: 2927793, End: 2950117, Length: 22325
Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria
General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009922:1* | 1 | 22763 | 22763 | Alkaliphilus oremlandii OhILAs, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007503:1486000 | 1486000 | 1505324 | 19325 | Carboxydothermus hydrogenoformans Z-2901, complete genome | 9e-34 | 153 | BLASTN svg | BLASTP svg |
NC_020134:420500 | 420500 | 447626 | 27127 | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 0 | 2880 | BLASTN svg | BLASTP svg |
NC_004557:363628* | 363628 | 387727 | 24100 | Clostridium tetani E88, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_009012:2953638* | 2953638 | 3017543 | 63906 | Clostridium thermocellum ATCC 27405, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_011661:906583* | 906583 | 924599 | 18017 | Dictyoglomus turgidum DSM 6724, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_007626:4688777 | 4688777 | 4710784 | 22008 | Magnetospirillum magneticum AMB-1, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_012803:361127* | 361127 | 382629 | 21503 | Micrococcus luteus NCTC 2665, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009091:1514770* | 1514770 | 1539244 | 24475 | Prochlorococcus marinus str. MIT 9301, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008319:171847* | 171847 | 209838 | 37992 | Synechococcus sp. CC9311, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007516:124486* | 124486 | 163304 | 38819 | Synechococcus sp. CC9605, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014220:2398334* | 2398334 | 2420999 | 22666 | Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015519:1081539* | 1081539 | 1105725 | 24187 | Tepidanaerobacter sp. Re1 chromosome, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_009720:2489003* | 2489003 | 2519805 | 30803 | Xanthobacter autotrophicus Py2, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |