Some Help

Query: NC_009012:2927793 Clostridium thermocellum ATCC 27405, complete genome

Start: 2927793, End: 2950117, Length: 22325

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020134:42050042050044762627127Clostridium stercorarium subsp. stercorarium DSM 8532, complete02880BLASTN svgBLASTP svg
NC_007503:14860001486000150532419325Carboxydothermus hydrogenoformans Z-2901, complete genome9e-34153BLASTN svgBLASTP svg
NC_015519:1081539*1081539110572524187Tepidanaerobacter sp. Re1 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_009012:2953638*2953638301754363906Clostridium thermocellum ATCC 27405, complete genome5e-20107BLASTN svgBLASTP svg
NC_009720:2489003*2489003251980530803Xanthobacter autotrophicus Py2, complete genome3e-18101BLASTN svgBLASTP svg
NC_007626:46887774688777471078422008Magnetospirillum magneticum AMB-1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_004557:363628*36362838772724100Clostridium tetani E88, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012803:361127*36112738262921503Micrococcus luteus NCTC 2665, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011661:906583*90658392459918017Dictyoglomus turgidum DSM 6724, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009091:1514770*1514770153924424475Prochlorococcus marinus str. MIT 9301, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008319:171847*17184720983837992Synechococcus sp. CC9311, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007516:124486*12448616330438819Synechococcus sp. CC9605, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009922:1*12276322763Alkaliphilus oremlandii OhILAs, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014220:2398334*2398334242099922666Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg