Pre_GI: BLASTN Hits

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Query: NC_009012:2706755 Clostridium thermocellum ATCC 27405, complete genome

Start: 2706755, End: 2729599, Length: 22845

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009012:3324000*3324000334828724288Clostridium thermocellum ATCC 27405, complete genome04575BLASTN svgBLASTP svg
NC_020134:19415231941523198006638544Clostridium stercorarium subsp. stercorarium DSM 8532, complete01011BLASTN svgBLASTP svg
NC_021184:35335003533500356421530716Desulfotomaculum gibsoniae DSM 7213, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008593:37456*374566080623351Clostridium novyi NT, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008570:1094442*1094442111732922888Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004578:38173303817330384200124672Pseudomonas syringae pv. tomato str. DC3000, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012108:94631494631496873322420Desulfobacterium autotrophicum HRM2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014844:1634985*1634985166007225088Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014328:12631391263139128186118723Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome3e-0661.9BLASTN svgBLASTP svg