Pre_GI: BLASTN Hits

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Query: NC_009012:2661795 Clostridium thermocellum ATCC 27405, complete genome

Start: 2661795, End: 2685908, Length: 24114

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015958:2361551*2361551238227520725Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome1e-39172BLASTN svgBLASTP svg
NC_014328:4471995*4471995450215530161Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-33151BLASTN svgBLASTP svg
NC_015687:3326461*3326461335126824808Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_003030:3324834*3324834334964224809Clostridium acetobutylicum ATCC 824, complete genome2e-31145BLASTN svgBLASTP svg
NC_003869:22676272267627228759019964Thermoanaerobacter tengcongensis MB4, complete genome6e-29137BLASTN svgBLASTP svg
NC_008593:153014*15301417175318740Clostridium novyi NT, complete genome6e-26127BLASTN svgBLASTP svg
NC_018664:23900023900026409925100Clostridium acidurici 9a chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_015519:924000*92400094202318024Tepidanaerobacter sp. Re1 chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_010516:3807780*3807780384035532576Clostridium botulinum B1 str. Okra, complete genome8e-19103BLASTN svgBLASTP svg
NC_020291:117983*11798315068032698Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009922:2721343*2721343276393542593Alkaliphilus oremlandii OhILAs, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010520:29379812937981296593527955Clostridium botulinum A3 str. Loch Maree, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_012563:4004709*4004709403727332565Clostridium botulinum A2 str. Kyoto, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012563:30909543090954312052229569Clostridium botulinum A2 str. Kyoto, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_004557:162670*16267018073018061Clostridium tetani E88, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020134:27725002772500279254620047Clostridium stercorarium subsp. stercorarium DSM 8532, complete5e-1487.7BLASTN svgBLASTP svg
NC_012914:66183176618317664054022224Paenibacillus sp. JDR-2, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014209:2257316*2257316228561028295Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,2e-1385.7BLASTN svgBLASTP svg
NC_014377:15461241546124157234626223Thermosediminibacter oceani DSM 16646 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014393:4541000*4541000456644025441Clostridium cellulovorans 743B chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_018664:2459994*2459994248609926106Clostridium acidurici 9a chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_008262:2649289*2649289270467655388Clostridium perfringens SM101, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007759:1571425*1571425160128029856Syntrophus aciditrophicus SB, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015913:62485962485964365018792Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014964:2301835*2301835232709925265Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_008817:228029*22802925236024332Prochlorococcus marinus str. MIT 9515, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008309:18278091827809185114023332Haemophilus somnus 129PT, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010723:173280*17328022135248073Clostridium botulinum E3 str. Alaska E43, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004193:79588*7958811154731960Oceanobacillus iheyensis HTE831, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010674:82819182819184720219012Clostridium botulinum B str. Eklund 17B, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010723:485874*48587450809922226Clostridium botulinum E3 str. Alaska E43, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011296:102650*10265012914226493Thermodesulfovibrio yellowstonii DSM 11347, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020291:684500*68450070271718218Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014828:2657623*2657623268107823456Ethanoligenens harbinense YUAN-3 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010723:80121580121582512923915Clostridium botulinum E3 str. Alaska E43, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014098:30302743030274305764927376Bacillus tusciae DSM 2912 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010516:29000572900057292557925523Clostridium botulinum B1 str. Okra, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004557:18269771826977184565818682Clostridium tetani E88, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010718:2337209*2337209237318135973Natranaerobius thermophilus JW/NM-WN-LF, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014106:1658103*1658103168286224760Lactobacillus crispatus ST1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015975:1493636*1493636151659922964Lactobacillus ruminis ATCC 27782 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015660:391627*39162741770326077Geobacillus thermoglucosidasius C56-YS93 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014655:18358481835848185524619399Leadbetterella byssophila DSM 17132 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011884:5019500*5019500505991140412Cyanothece sp. PCC 7425, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008262:2379144*2379144239845819315Clostridium perfringens SM101, complete genome3e-0661.9BLASTN svgBLASTP svg