Query: NC_009012:1934107 Clostridium thermocellum ATCC 27405, complete genome
Start: 1934107, End: 1978023, Length: 43917
Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria
General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_014410:800500 | 800500 | 847581 | 47082 | Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome, | 0 | 17440 | BLASTN svg | BLASTP svg |
NC_018870:2316499* | 2316499 | 2383660 | 67162 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 0 | 8671 | BLASTN svg | BLASTP svg |
NC_015520:2974048 | 2974048 | 3004599 | 30552 | Mahella australiensis 50-1 BON chromosome, complete genome | 0 | 7351 | BLASTN svg | BLASTP svg |
NC_010003:449192* | 449192 | 478914 | 29723 | Petrotoga mobilis SJ95, complete genome | 0 | 5939 | BLASTN svg | BLASTP svg |
NC_010337:2793667* | 2793667 | 2830137 | 36471 | Heliobacterium modesticaldum Ice1, complete genome | 0 | 1937 | BLASTN svg | BLASTP svg |
NC_009454:1577319* | 1577319 | 1656810 | 79492 | Pelotomaculum thermopropionicum SI, complete genome | 0 | 973 | BLASTN svg | BLASTP svg |
NC_014538:1598106 | 1598106 | 1625818 | 27713 | Thermoanaerobacter sp. X513 chromosome, complete genome | 7e-30 | 141 | BLASTN svg | BLASTP svg |
NC_021184:3497000 | 3497000 | 3523035 | 26036 | Desulfotomaculum gibsoniae DSM 7213, complete genome | 3e-26 | 129 | BLASTN svg | BLASTP svg |
NC_010337:2848360* | 2848360 | 2897101 | 48742 | Heliobacterium modesticaldum Ice1, complete genome | 3e-26 | 129 | BLASTN svg | BLASTP svg |
NC_014393:4775452 | 4775452 | 4839140 | 63689 | Clostridium cellulovorans 743B chromosome, complete genome | 4e-19 | 105 | BLASTN svg | BLASTP svg |
NC_011898:3367457* | 3367457 | 3413599 | 46143 | Clostridium cellulolyticum H10, complete genome | 4e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_003909:386880* | 386880 | 414539 | 27660 | Bacillus cereus ATCC 10987, complete genome | 9e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014328:303063* | 303063 | 377862 | 74800 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 4e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014828:1987487* | 1987487 | 2015361 | 27875 | Ethanoligenens harbinense YUAN-3 chromosome, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_021184:4493440 | 4493440 | 4519129 | 25690 | Desulfotomaculum gibsoniae DSM 7213, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_019903:1312843* | 1312843 | 1337735 | 24893 | Desulfitobacterium dichloroeliminans LMG P-21439 chromosome, | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_016023:2163000* | 2163000 | 2197384 | 34385 | Bacillus coagulans 36D1 chromosome, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015697:468234 | 468234 | 490098 | 21865 | Lactobacillus reuteri SD2112 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |