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Query: NC_009012:1934107 Clostridium thermocellum ATCC 27405, complete genome

Start: 1934107, End: 1978023, Length: 43917

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014410:80050080050084758147082Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,017440BLASTN svgBLASTP svg
NC_018870:2316499*2316499238366067162Thermacetogenium phaeum DSM 12270 chromosome, complete genome08671BLASTN svgBLASTP svg
NC_015520:29740482974048300459930552Mahella australiensis 50-1 BON chromosome, complete genome07351BLASTN svgBLASTP svg
NC_010003:449192*44919247891429723Petrotoga mobilis SJ95, complete genome05939BLASTN svgBLASTP svg
NC_010337:2793667*2793667283013736471Heliobacterium modesticaldum Ice1, complete genome01937BLASTN svgBLASTP svg
NC_009454:1577319*1577319165681079492Pelotomaculum thermopropionicum SI, complete genome0973BLASTN svgBLASTP svg
NC_014538:15981061598106162581827713Thermoanaerobacter sp. X513 chromosome, complete genome7e-30141BLASTN svgBLASTP svg
NC_021184:34970003497000352303526036Desulfotomaculum gibsoniae DSM 7213, complete genome3e-26129BLASTN svgBLASTP svg
NC_010337:2848360*2848360289710148742Heliobacterium modesticaldum Ice1, complete genome3e-26129BLASTN svgBLASTP svg
NC_014393:47754524775452483914063689Clostridium cellulovorans 743B chromosome, complete genome4e-19105BLASTN svgBLASTP svg
NC_011898:3367457*3367457341359946143Clostridium cellulolyticum H10, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_003909:386880*38688041453927660Bacillus cereus ATCC 10987, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_014328:303063*30306337786274800Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_014828:1987487*1987487201536127875Ethanoligenens harbinense YUAN-3 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_021184:44934404493440451912925690Desulfotomaculum gibsoniae DSM 7213, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_019903:1312843*1312843133773524893Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,3e-1075.8BLASTN svgBLASTP svg
NC_016023:2163000*2163000219738434385Bacillus coagulans 36D1 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015697:46823446823449009821865Lactobacillus reuteri SD2112 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg