Pre_GI: BLASTN Hits

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Query: NC_009012:1857845 Clostridium thermocellum ATCC 27405, complete genome

Start: 1857845, End: 1880099, Length: 22255

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009012:2953638*2953638301754363906Clostridium thermocellum ATCC 27405, complete genome03380BLASTN svgBLASTP svg
NC_009012:3354477*3354477340124946773Clostridium thermocellum ATCC 27405, complete genome02755BLASTN svgBLASTP svg
NC_009012:23565002356500237463518136Clostridium thermocellum ATCC 27405, complete genome02004BLASTN svgBLASTP svg
NC_009012:3324000*3324000334828724288Clostridium thermocellum ATCC 27405, complete genome01237BLASTN svgBLASTP svg
NC_020291:48158534815853483840422552Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012781:62976162976164846518705Eubacterium rectale ATCC 33656, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011146:3537546*3537546356804230497Geobacter bemidjiensis Bem, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009662:1285826*1285826130815922334Nitratiruptor sp. SB155-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020453:4696000*4696000471843322434Agromonas oligotrophica S58 DNA, complete genome7e-0763.9BLASTN svgBLASTP svg