Pre_GI: BLASTP Hits

Some Help

Query: NC_009012:686740:695212 Clostridium thermocellum ATCC 27405, complete genome

Start: 695212, End: 695724, Length: 513

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:2921769:294945029494502949941492Clostridium saccharolyticum WM1 chromosome, complete genomepeptide deformylase2e-45181
NC_019970:1457794:145779414577941458273480Thermoanaerobacterium thermosaccharolyticum M0795, complete genomepeptide deformylase9e-45179
NC_019897:73957:124573124573125091519Thermobacillus composti KWC4 chromosome, complete genomepeptide deformylase9e-41166
NC_009697:2680607:268476226847622685298537Clostridium botulinum A str. ATCC 19397 chromosome, completepeptide deformylase4e-34143
NC_010520:2807429:283291628329162833452537Clostridium botulinum A3 str. Loch Maree, complete genomepeptide deformylase6e-34143
NC_012563:2979147:298582129858212986357537Clostridium botulinum A2 str. Kyoto, complete genomepeptide deformylase7e-34143
NC_014314:576465:608919608919609443525Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completepeptide deformylase8e-33139
NC_015425:906969:921878921878922357480Clostridium botulinum BKT015925 chromosome, complete genomepeptide deformylase7e-33139
NC_007517:3751107:375343537534353753938504Geobacter metallireducens GS-15, complete genomeFormylmethionine deformylase8e-32135
NC_008593:841291:856270856270856746477Clostridium novyi NT, complete genomepeptide deformylase1e-31135
NC_003112:96815:118025118025118528504Neisseria meningitidis MC58, complete genomepeptide deformylase3e-31134
NC_008767:84950:106002106002106505504Neisseria meningitidis FAM18, complete genomepolypeptide deformylase3e-31134
NC_017501:96211:116370116370116873504Neisseria meningitidis 8013, complete genomepeptide deformylase (PDF; polypeptide deformylase)3e-31134
NC_017505:96293:116667116667117170504Neisseria meningitidis alpha710 chromosome, complete genomepolypeptide deformylase3e-31134
NC_017515:76861:124063124063124566504Neisseria meningitidis M04-240196 chromosome, complete genomepeptide deformylase3e-31134
NC_017516:96879:118089118089118592504Neisseria meningitidis H44/76 chromosome, complete genomepeptide deformylase3e-31134
NC_017517:98554:119526119526120029504Neisseria meningitidis M01-240355 chromosome, complete genomepeptide deformylase3e-31134
NC_017518:98639:119014119014119517504Neisseria meningitidis NZ-05/33 chromosome, complete genomepeptide deformylase3e-31134
NC_011035:1974489:199596819959681996513546Neisseria gonorrhoeae NCCP11945 chromosome, complete genomepeptide deformylase4e-31133
NC_017511:1883663:190423819042381904783546Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomepeptide deformylase4e-31133
NC_008260:125500:142342142342142848507Alcanivorax borkumensis SK2, complete genomepeptide deformylase6e-29126
NC_013192:171000:171005171005171523519Leptotrichia buccalis DSM 1135, complete genomepeptide deformylase9e-29125
NC_005125:2366778:238806323880632388626564Gloeobacter violaceus PCC 7421, complete genomepeptide deformylase3e-28124
NC_017187:1580988:159849315984931599008516Arcobacter butzleri ED-1, complete genomepeptide deformylase9e-28122
NC_018604:838932:861197861197861730534Brachyspira pilosicoli WesB complete genomepeptide deformylase5e-27120
NC_013854:2714033:273246827324682732980513Azospirillum sp. B510, complete genomepeptide deformylase2e-26118
NC_011978:699500:722238722238722732495Thermotoga neapolitana DSM 4359, complete genomePeptide deformylase3e-26117
CP002185:3627992:364665936466593647168510Escherichia coli W, complete genomepeptide deformylase4e-26117
NC_002695:4153394:416870241687024169211510Escherichia coli O157:H7 str. Sakai, complete genomepeptide deformylase4e-26117
NC_011992:3615517:363469936346993635211513Acidovorax ebreus TPSY, complete genomepeptide deformylase5e-26117
NC_008752:5213431:523272252327225233231510Acidovorax avenae subsp. citrulli AAC00-1, complete genomepeptide deformylase5e-26117
NC_006511:3364448:338332333833233383832510Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpeptide deformylase6e-26116
NC_015138:5276857:529789952978995298408510Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completepeptide deformylase1e-25115
NC_008513:343540:354044354044354493450Buchnera aphidicola str. Cc (Cinara cedri), complete genomeDef4e-25114
NC_008261:2117207:212122021212202121687468Clostridium perfringens ATCC 13124, complete genomepolypeptide deformylase3e-25114
NC_003366:1901898:190591019059101906377468Clostridium perfringens str. 13, complete genomepolypeptide deformylase3e-25114
NC_005061:214168:236304236304236831528Candidatus Blochmannia floridanus, complete genomepolypeptide deformylase2e-24111
NC_012440:585568:590444590444590974531Persephonella marina EX-H1, complete genomepeptide deformylase3e-24111
NC_013282:3962188:397851939785193979052534Cronobacter turicensis, complete genomePeptide deformylase3e-24111
NC_016789:1334514:135447213544721354981510Corynebacterium diphtheriae PW8 chromosome, complete genomepeptide deformylase4e-24110
NC_010410:3719599:373875537387553739285531Acinetobacter baumannii AYE, complete genomepeptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II))4e-24110
NC_010611:208268:210696210696211226531Acinetobacter baumannii ACICU, complete genomeN-formylmethionyl-tRNA deformylase4e-24110
NC_002935:1315019:133497513349751335484510Corynebacterium diphtheriae NCTC 13129, complete genomepeptide deformylase4e-24110
NC_016783:1313008:133296413329641333473510Corynebacterium diphtheriae INCA 402 chromosome, complete genomepeptide deformylase4e-24110
NC_016787:1276983:129808412980841298593510Corynebacterium diphtheriae HC03 chromosome, complete genomepeptide deformylase3e-24110
NC_016790:1259356:127546312754631275972510Corynebacterium diphtheriae VA01 chromosome, complete genomepeptide deformylase3e-24110
NC_016799:1343020:136412013641201364629510Corynebacterium diphtheriae 31A chromosome, complete genomepeptide deformylase3e-24110
NC_011833:545713:546430546430546951522Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,peptide deformylase6e-23106
NC_004545:499709:513039513039513521483Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomepolypeptide deformylase8e-23106
NC_017256:545204:545917545917546432516Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,peptide deformylase9e-23105
NC_013889:2603914:260893026089302609466537Thioalkalivibrio sp. K90mix chromosome, complete genomepeptide deformylase1e-21102
NC_012039:1399699:142201114220111422532522Campylobacter lari RM2100, complete genomepeptide deformylase8e-22102
NC_014004:66631:877158771588284570Candidatus Sulcia muelleri DMIN chromosome, complete genomepeptide deformylase3e-21100
NC_007798:301456:320139320139320699561Neorickettsia sennetsu str. Miyayama, complete genomepeptide deformylase1e-2099.4
NC_006142:243899:254055254055254582528Rickettsia typhi str. Wilmington, complete genomepeptide deformylase9e-2199.4
NC_017062:244330:254486254486255013528Rickettsia typhi str. B9991CWPP chromosome, complete genomepeptide deformylase9e-2199.4
NC_017066:243913:254069254069254596528Rickettsia typhi str. TH1527 chromosome, complete genomepeptide deformylase9e-2199.4
NC_014391:3596812:361503836150383615541504Micromonospora aurantiaca ATCC 27029 chromosome, complete genomepeptide deformylase2e-2098.6
NC_014815:5603000:560875356087535609256504Micromonospora sp. L5 chromosome, complete genomepeptide deformylase2e-2098.6
NC_004061:540354:545791545791546294504Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomepolypeptide deformylase2e-2098.2
NC_009484:464342:464962464962465528567Acidiphilium cryptum JF-5 chromosome, complete genomepeptide deformylase2e-2098.2
NC_015186:573289:573918573918574475558Acidiphilium multivorum AIU301, complete genomepeptide deformylase2e-2098.2
NC_017095:1333810:134101513410151341515501Fervidobacterium pennivorans DSM 9078 chromosome, complete genomepeptide deformylase2e-2098.2
NC_009881:283500:285876285876286403528Rickettsia akari str. Hartford, complete genomepeptide deformylase4e-2097.4
NC_015866:274550:285188285188285715528Rickettsia heilongjiangensis 054 chromosome, complete genomepeptide deformylase4e-2097.1
NC_016931:269537:276698276698277225528Rickettsia massiliae str. AZT80 chromosome, complete genomepeptide deformylase5e-2097.1
NC_015434:3581001:359845235984523598949498Verrucosispora maris AB-18-032 chromosome, complete genomepeptide deformylase6e-2096.7
NC_012633:276500:281890281890282417528Rickettsia africae ESF-5, complete genomePolypeptide deformylase1e-1995.9
NC_016915:278000:283468283468283995528Rickettsia rickettsii str. Hlp#2 chromosome, complete genomepeptide deformylase1e-1995.5
NC_014033:675626:692194692194692754561Prevotella ruminicola 23 chromosome, complete genomepeptide deformylase2e-1995.1
NC_003103:266013:279505279505280032528Rickettsia conorii str. Malish 7, complete genomepeptide deformylase2e-1995.1
NC_017044:278500:283988283988284515528Rickettsia parkeri str. Portsmouth chromosome, complete genomepeptide deformylase2e-1995.1
NC_012730:293634:306459306459306986528Rickettsia peacockii str. Rustic, complete genomepeptide deformylase2e-1995.1
NC_009882:278384:283754283754284281528Rickettsia rickettsii str. 'Sheila Smith', complete genomepeptide deformylase2e-1995.1
NC_016639:274157:284663284663285190528Rickettsia slovaca 13-B chromosome, complete genomePolypeptide deformylase2e-1995.1
NC_016908:278457:283825283825284352528Rickettsia rickettsii str. Colombia chromosome, complete genomepeptide deformylase2e-1995.1
NC_016913:859931:884745884745885272528Rickettsia rickettsii str. Brazil chromosome, complete genomepeptide deformylase2e-1995.1
NC_017065:274165:284671284671285198528Rickettsia slovaca str. D-CWPP chromosome, complete genomepeptide deformylase2e-1995.1
NC_008820:1659612:166494716649471665492546Prochlorococcus marinus str. MIT 9303, complete genomeFormylmethionine deformylase2e-1994.7
NC_010263:278463:283833283833284360528Rickettsia rickettsii str. Iowa, complete genomepeptide deformylase3e-1994.4
NC_016909:278327:283698283698284225528Rickettsia rickettsii str. Arizona chromosome, complete genomepeptide deformylase3e-1994.4
NC_016911:278415:283786283786284313528Rickettsia rickettsii str. Hauke chromosome, complete genomepeptide deformylase3e-1994.4
NC_016914:278500:283919283919284446528Rickettsia rickettsii str. Hino chromosome, complete genomepeptide deformylase3e-1994.4
NC_017043:990395:100111710011171001644528Rickettsia montanensis str. OSU 85-930 chromosome, complete genomepeptide deformylase5e-1993.6
NC_017058:1152361:116463611646361165163528Rickettsia australis str. Cutlack chromosome, complete genomepeptide deformylase5e-1993.6
NC_004842:1081271:110137011013701101927558Anaplasma marginale str. St. Maries, complete genomeN-formylmethionylaminoacyl-tRNA deformylase6e-1993.2
NC_016929:258500:266645266645267172528Rickettsia canadensis str. CA410 chromosome, complete genomepeptide deformylase9e-1992.8
NC_009879:260000:266962266962267489528Rickettsia canadensis str. McKiel, complete genomepeptide deformylase9e-1992.8
NC_013132:6385223:639321763932176393792576Chitinophaga pinensis DSM 2588, complete genomepeptide deformylase2e-1892
NC_014924:3065430:307355030735503074092543Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomepeptide deformylase2e-1891.7
NC_014109:393500:416454416454416909456Candidatus Riesia pediculicola USDA chromosome, complete genomepeptide deformylase2e-1891.7
NC_014643:1986440:198776619877661988338573Rothia dentocariosa ATCC 17931 chromosome, complete genomepeptide deformylase2e-1891.3
NC_013440:8443451:845437984543798454894516Haliangium ochraceum DSM 14365, complete genomeformylmethionine deformylase6e-1890.1
NC_010581:561579:576054576054576551498Beijerinckia indica subsp. indica ATCC 9039, complete genomepeptide deformylase2e-1788.2
NC_014210:2372813:238910423891042389763660Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,peptide deformylase7e-1786.7
NC_015953:4908069:493009249300924930730639Streptomyces sp. SirexAA-E chromosome, complete genomepeptide deformylase2e-1684.7
NC_013123:78786:104565104565105107543Candidatus Sulcia muelleri SMDSEM, complete genomepeptide deformylase3e-1684.3
NC_009718:1024000:104289810428981043410513Fervidobacterium nodosum Rt17-B1, complete genomepeptide deformylase2e-1581.3
NC_020126:5849483:586317358631735863775603Myxococcus stipitatus DSM 14675, complete genomepeptide deformylase2e-1581.3
NC_015656:105840:1068141068141084031590Frankia symbiont of Datisca glomerata chromosome, complete genomeXRE family transcriptional regulator3e-1581.3
NC_008025:2407618:241301524130152413665651Deinococcus geothermalis DSM 11300, complete genomePeptide deformylase3e-1580.9
NC_014655:851381:856124856124856705582Leadbetterella byssophila DSM 17132 chromosome, complete genomepeptide deformylase1e-1479
NC_007947:1556437:157481815748181575351534Methylobacillus flagellatus KT, complete genomePeptide deformylase1e-1479
NC_011989:1638261:166424516642451664745501Agrobacterium vitis S4 chromosome 1, complete sequencepeptide deformylase3e-1477.4
NC_014371:177536:182944182944183504561Prevotella melaninogenica ATCC 25845 chromosome chromosome II,peptide deformylase1e-1376.3
NC_014391:6848475:6866830686683068683621533Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeformylmethionine deformylase6e-1373.6
NC_017316:2466244:246624424662442466807564Enterococcus faecalis OG1RF chromosome, complete genomepeptide deformylase4e-1270.9
NC_004668:2938000:293813929381392938702564Enterococcus faecalis V583, complete genomepeptide deformylase4e-1270.9
NC_015957:8777644:8792053879205387935551503Streptomyces violaceusniger Tu 4113 chromosome, complete genomeXRE family transcriptional regulator4e-1270.5
NC_018528:65000:718617186172274414Lactobacillus helveticus R0052 chromosome, complete genomepeptide deformylase5e-1270.5
NC_010080:69000:754017540175814414Lactobacillus helveticus DPC 4571, complete genomePolypeptide deformylase6e-1270.1
NC_009706:2673906:272573827257382726313576Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein8e-1269.7
NC_014655:2533929:253730625373062537962657Leadbetterella byssophila DSM 17132 chromosome, complete genomepeptide deformylase2e-1168.6
NC_008027:4280000:430333243033324303868537Pseudomonas entomophila L48, complete genomepeptide deformylase 22e-1168.2
NC_004461:779000:781464781464782015552Staphylococcus epidermidis ATCC 12228, complete genomepeptide deformylase3e-1167.8
NC_015434:6508500:6509904650990465114181515Verrucosispora maris AB-18-032 chromosome, complete genomeXRE family transcriptional regulator6e-1167
NC_013740:1081454:109316310931631093573411Acidaminococcus fermentans DSM 20731, complete genomeformylmethionine deformylase4e-1064.3
NC_015214:48999:561175611756530414Lactobacillus acidophilus 30SC chromosome, complete genomepeptide deformylase2e-0962
NC_014724:59000:653216532165734414Lactobacillus amylovorus GRL 1112 chromosome, complete genomepeptide deformylase2e-0962
NC_014106:54587:614936149361906414Lactobacillus crispatus ST1, complete genomePeptide deformylase1e-0858.9
NC_012730:411526:415312415312415986675Rickettsia peacockii str. Rustic, complete genomepeptide deformylase2e-0858.2
NC_003103:70000:726597265973333675Rickettsia conorii str. Malish 7, complete genomepolypeptide deformylase [EC:3.5.1.31]2e-0858.2
NC_016048:2907702:292746729274672927877411Oscillibacter valericigenes Sjm18-20, complete genomepeptide deformylase3e-0858.2
NC_016050:73993:778737787378547675Rickettsia japonica YH, complete genomepolypeptide deformylase4e-0857.8
NC_013204:929434:950025950025950435411Eggerthella lenta DSM 2243, complete genomeformylmethionine deformylase4e-0857.4
NC_016931:107880:127501127501128175675Rickettsia massiliae str. AZT80 chromosome, complete genomepolypeptide deformylase6e-0857
NC_009900:73804:761817618176879699Rickettsia massiliae MTU5, complete genomePolypeptide deformylase8e-0856.6
NC_017078:179848:198530198530198943414Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative peptide deformylase4e-0754.3
NC_013174:650986:659817659817660554738Jonesia denitrificans DSM 20603, complete genomePeptide deformylase5e-0753.9
NC_011900:1451545:147245614724561472866411Streptococcus pneumoniae ATCC 700669, complete genomepeptide deformylase7e-0753.5
NC_008533:1380406:139994713999471400357411Streptococcus pneumoniae D39, complete genomepolypeptide deformylase7e-0753.5
NC_003098:1372875:139241613924161392826411Streptococcus pneumoniae R6, complete genomepeptide deformylase7e-0753.5
NC_012469:1403412:142081714208171421227411Streptococcus pneumoniae Taiwan19F-14, complete genomepolypeptide deformylase7e-0753.5
NC_012466:1367099:138531413853141385724411Streptococcus pneumoniae JJA, complete genomepolypeptide deformylase7e-0753.5
NC_012468:1453763:147160514716051472015411Streptococcus pneumoniae 70585, complete genomepeptide deformylase2e-0652
NC_012471:1197534:127764412776441278054411Streptococcus equi subsp. equi 4047, complete genomepeptide deformylase5e-0650.4