Pre_GI: BLASTP Hits

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Query: NC_009012:3653111:3663131 Clostridium thermocellum ATCC 27405, complete genome

Start: 3663131, End: 3663763, Length: 633

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:3815690:383083038308303831459630Clostridium clariflavum DSM 19732 chromosome, complete genomeorganic radical activating enzyme2e-82304
NC_011770:4763506:477878447787844779578795Pseudomonas aeruginosa LESB58, complete genomeputative radical activating enzyme5e-47187
NC_002516:1031386:105881210588121059606795Pseudomonas aeruginosa PAO1, complete genomeprobable radical activating enzyme6e-47187
NC_018080:4465618:447999844799984480645648Pseudomonas aeruginosa DK2 chromosome, complete genomeradical activating enzyme6e-47187
NC_003902:3544743:356133735613373562020684Xanthomonas campestris pv. campestris str. ATCC 33913, completeradical activating enzyme1e-46186
NC_008463:4566976:459192845919284592722795Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable radical activating enzyme2e-46185
NC_014394:2765261:278156927815692782228660Gallionella capsiferriformans ES-2 chromosome, complete genomeRadical SAM domain-containing protein3e-46184
NC_002488:1775629:180189218018921802575684Xylella fastidiosa 9a5c, complete genomehypothetical protein9e-46183
NC_014733:2363838:239044223904422391080639Methylovorus sp. MP688 chromosome, complete genomeradical sam domain protein1e-45182
NC_004129:5481629:549435354943535495000648Pseudomonas fluorescens Pf-5, complete genomeradical activating enzyme3e-45181
NC_004578:4465247:447726444772644477911648Pseudomonas syringae pv. tomato str. DC3000, complete genomeradical SAM domain protein2e-42172
NC_010730:578493:584397584397585059663Sulfurihydrogenibium sp. YO3AOP1, complete genomeRadical SAM domain protein3e-23108
NC_012440:1215838:124151512415151242159645Persephonella marina EX-H1, complete genomeradical SAM domain protein1e-20100
NC_012438:159927:166282166282166935654Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeorganic radical activating enzyme6e-2097.4
NC_012589:1482075:149980914998091500435627Sulfolobus islandicus L.S.2.15, complete genomeRadical SAM domain protein4e-1891.3
NC_012588:1394103:141183714118371412463627Sulfolobus islandicus M.14.25 chromosome, complete genomeradical SAM protein4e-1891.3
NC_012622:1371448:138918213891821389808627Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein4e-1891.3
NC_012623:1167289:116828411682841168910627Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein4e-1891.3
NC_012632:1518520:153625415362541536880627Sulfolobus islandicus M.16.27 chromosome, complete genomeradical SAM protein4e-1891.3
NC_012726:1382095:139982913998291400455627Sulfolobus islandicus M.16.4 chromosome, complete genomeradical SAM protein4e-1891.3
NC_013769:1478546:149628014962801496906627Sulfolobus islandicus L.D.8.5 chromosome, complete genomeradical SAM protein4e-1891.3
NC_017275:1436875:145461014546101455236627Sulfolobus islandicus HVE10/4 chromosome, complete genomeradical SAM protein4e-1891.3
NC_002754:537792:540769540769541404636Sulfolobus solfataricus P2, complete genomehypothetical protein1e-1790.1
NC_017276:1285824:130355913035591304185627Sulfolobus islandicus REY15A chromosome, complete genomeorganic radical activating enzyme, NrdG1e-1789.7
NC_009615:1469642:150960615096061510151546Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein4e-1787.8
NC_009440:1908864:190943119094311910063633Metallosphaera sedula DSM 5348 chromosome, complete genomeradical SAM protein2e-1685.9
NC_011126:555483:590869590869591507639Hydrogenobaculum sp. Y04AAS1, complete genomeRadical SAM domain protein3e-1685.5
NC_019973:5650646:566970256697025670436735Mesorhizobium australicum WSM2073, complete genome7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE3e-1581.6
NC_015675:6276357:629541362954136296147735Mesorhizobium opportunistum WSM2075 chromosome, complete genome7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE3e-1581.6
NC_014923:5721686:574074257407425741476735Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE3e-1581.6
NC_015574:2221220:223267722326772233378702Methanobacterium sp. SWAN-1 chromosome, complete genomeRadical SAM domain-containing protein5e-1581.3
NC_007181:1364522:136623613662361366871636Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein5e-1580.9
NC_003106:1484768:148574214857421486380639Sulfolobus tokodaii str. 7, complete genomehypothetical protein7e-1580.5
NC_010644:691374:691374691374691961588Elusimicrobium minutum Pei191, complete genomeradical SAM domain-containing protein3e-1478.6
NC_009053:1257302:127003912700391270671633Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein5e-1477.8
NC_008027:2621443:264128526412852641974690Pseudomonas entomophila L48, complete genomehypothetical protein6e-1477.4
NC_015151:1872280:189484318948431895499657Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeradical SAM protein7e-1477
NC_002939:1866651:188452518845251885277753Geobacter sulfurreducens PCA, complete genomeradical SAM domain protein1e-1376.6
NC_011979:3070110:309103330910333091782750Geobacter sp. FRC-32, complete genomeRadical SAM domain protein1e-1376.3
NC_015518:1638262:163957216395721640189618Acidianus hospitalis W1 chromosome, complete genomeorganic radical activating enzyme, NrdG4e-1374.7
NC_017516:1755500:175582917558291756467639Neisseria meningitidis H44/76 chromosome, complete genomeradical SAM domain-containing protein9e-1373.6
NC_017515:1744500:174478717447871745425639Neisseria meningitidis M04-240196 chromosome, complete genomeradical SAM domain-containing protein9e-1373.6
NC_017195:1411936:141804614180461418777732Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYkvL8e-1270.5
NC_018145:50237:639806398064633654Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completehypothetical protein5e-1167.8
NC_006526:1303635:130686313068631307516654Zymomonas mobilis subsp. mobilis ZM4, complete genomeorganic radical activating enzyme5e-1167.8
NC_008699:1132790:115779211577921158532741Nocardioides sp. JS614, complete genomeRadical SAM domain protein2e-1065.9
NC_008278:2972323:298642829864282987093666Frankia alni ACN14a, complete genomeMycobacteriophage protein Gp52e-1065.9
NC_020410:1301500:130532513053251306056732Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete7-carboxy-7-deazaguanine synthase3e-1065.1
NC_019907:773944:779028779028779660633Liberibacter crescens BT-1 chromosome, complete genomequeuosine biosynthesis radical SAM protein QueE4e-1064.7
NC_006512:952894:965040965040965741702Idiomarina loihiensis L2TR, complete genomeOrganic radical activating enzyme1e-0963.2
NC_012039:1365576:136615713661571366906750Campylobacter lari RM2100, complete genomeradical SAM domain protein1e-0963.2
NC_016111:639819:673680673680674387708Streptomyces cattleya NRRL 8057, complete genomeradical SAM protein2e-0962.4
NC_009256:3540531:354421035442103544842633Burkholderia vietnamiensis G4 chromosome 1, complete sequenceorganic radical activating enzyme-like protein3e-0961.6
NC_013729:863743:896491896491897126636Kribbella flavida DSM 17836, complete genomehypothetical protein7e-0960.8
NC_015676:1663700:168455016845501685266717Methanosalsum zhilinae DSM 4017 chromosome, complete genomeRadical SAM domain-containing protein8e-0960.5
NC_014008:2176633:218067321806732181353681Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeRadical SAM domain protein2e-0859.7
NC_014541:3642241:367457736745773675251675Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein3e-0858.9
NC_000909:1615927:162768016276801628411732Methanocaldococcus jannaschii DSM 2661, complete genomecoenzyme PQQ synthesis protein III3e-0858.5
NC_008820:2595500:261795826179582618638681Prochlorococcus marinus str. MIT 9303, complete genomepossible organic radical activating enzyme4e-0858.2
NC_007984:221030:234917234917235588672Baumannia cicadellinicola str. Hc (Homalodisca coagulata), completehypothetical protein4e-0858.2
NC_018419:226000:244131244131244802672Secondary endosymbiont of Ctenarytaina eucalypti chromosome,organic radical activating enzyme5e-0857.8
NC_013162:811763:811763811763812395633Capnocytophaga ochracea DSM 7271, complete genomeRadical SAM domain protein7e-0857.4
NC_017187:1923733:194278119427811943545765Arcobacter butzleri ED-1, complete genomeradical SAM domain-containing protein8e-0857
NC_017082:532000:558486558486559136651Bradyrhizobium sp. S23321, complete genomehypothetical protein1e-0756.6
NC_019673:2155669:217328421732842173919636Saccharothrix espanaensis DSM 44229 complete genomeGntS family protein1e-0756.2
NC_015703:234960:250733250733251335603Runella slithyformis DSM 19594 chromosome, complete genomeRadical SAM domain-containing protein3e-0755.5
NC_018866:1706000:172228217222821722953672Dehalobacter sp. DCA chromosome, complete genomeRibonucleotide reductase of class III (anaerobic), activating protein4e-0755.1
NC_015224:889536:896196896196896867672Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein4e-0755.1
NC_009091:1598044:160873816087381609409672Prochlorococcus marinus str. MIT 9301, complete genomepossible organic radical activating enzyme4e-0651.6
NC_015636:379000:401314401314402054741Methanothermococcus okinawensis IH1 chromosome, complete genomeRadical SAM domain-containing protein6e-0650.8
NC_014804:803510:805462805462806385924Thermococcus barophilus MP chromosome, complete genomemolybdenum cofactor biosynthesis protein1e-0550.1