Pre_GI: BLASTP Hits

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Query: NC_009012:3324000:3335367 Clostridium thermocellum ATCC 27405, complete genome

Start: 3335367, End: 3336200, Length: 834

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:2706755:271265327126532713465813Clostridium thermocellum ATCC 27405, complete genomeMCP methyltransferase, CheR-type2e-140498
NC_020134:1941523:194635119463511947166816Clostridium stercorarium subsp. stercorarium DSM 8532, completechemotaxis protein methyltransferase 23e-127454
NC_009617:4805413:481165348116534812465813Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeprotein-glutamate O-methyltransferase5e-93340
NC_014844:2056943:207245020724502073325876Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeProtein-glutamate O-methyltransferase1e-43176
NC_008011:1394777:139782613978261398701876Lawsonia intracellularis PHE/MN1-00, complete genomeMethylase of chemotaxis methyl-accepting proteins2e-43176
NC_011979:3712845:373710537371053737968864Geobacter sp. FRC-32, complete genomeMCP methyltransferase, CheR-type2e-41169
NC_013851:759500:777281777281778114834Allochromatium vinosum DSM 180 chromosome, complete genomeMCP methyltransferase, CheR-type2e-38159
NC_011979:4293859:429385942938594294731873Geobacter sp. FRC-32, complete genomeMCP methyltransferase, CheR-type2e-37155
NC_009483:5113729:512555451255545126387834Geobacter uraniireducens Rf4 chromosome, complete genomeprotein-glutamate O-methyltransferase1e-36153
NC_016629:3308329:335194233519423352808867Desulfovibrio africanus str. Walvis Bay chromosome, completechemotaxis protein CheR2e-36152
NC_009485:1604942:161546616154661616344879Bradyrhizobium sp. BTAi1 chromosome, complete genomechemotaxis protein methyltransferase cheR4e-36152
NC_015732:3105649:312548031254803126295816Spirochaeta caldaria DSM 7334 chromosome, complete genomeMCP methyltransferase, CheR-type7e-36150
NC_014330:505412:514933514933515778846Brachyspira pilosicoli 95/1000 chromosome, complete genomechemotaxis protein methyltransferase CheR8e-36150
NC_019908:121178:148988148988149833846Brachyspira pilosicoli P43/6/78 chromosome, complete genomechemotaxis protein methyltransferase CheR8e-36150
NC_018607:921923:949268949268950113846Brachyspira pilosicoli B2904 chromosome, complete genomechemotaxis protein methyltransferase CheR8e-36150
NC_015958:2251619:225906022590602259878819Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeCheR-type MCP methyltransferase1e-35150
NC_018604:1943561:194875019487501949595846Brachyspira pilosicoli WesB complete genomechemotaxis protein methyltransferase CheR2e-35149
NC_016830:2642881:267023926702392671075837Pseudomonas fluorescens F113 chromosome, complete genomeprotein CheR22e-34146
NC_014012:207289:209505209505210371867Shewanella violacea DSS12, complete genomechemotaxis protein methyltransferase CheR4e-34145
NC_015222:1607757:161392416139241614787864Nitrosomonas sp. AL212 chromosome, complete genomeMCP methyltransferase, CheR-type3e-33142
NC_006156:17637:396923969240543852Borrelia garinii PBi chromosome linear, complete sequencechemotaxis protein methyltransferase3e-33142
NC_017243:1698000:171088817108881711739852Brachyspira intermedia PWS/A chromosome, complete genomechemotaxis protein methyltransferase CheR3e-33142
NC_012660:5571500:559247555924755593284810Pseudomonas fluorescens SBW25 chromosome, complete genomechemotaxis response, glutamate methyltransferase6e-33141
NC_010337:1999405:2020662202066220220261365Heliobacterium modesticaldum Ice1, complete genomemethylase of chemotaxis methyl-accepting protein, putative5e-33141
NC_014541:2978500:297850329785032979336834Ferrimonas balearica DSM 9799 chromosome, complete genomeMCP methyltransferase, CheR-type4e-33141
NC_012225:569590:582692582692583543852Brachyspira hyodysenteriae WA1, complete genomechemotaxis protein methyltransferase CheR4e-33141
NC_000868:1502276:151518115151811516032852Pyrococcus abyssi GE5, complete genomechemotaxis protein methyltransferase1e-32140
NC_006370:847204:858444858444859355912Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical chemotaxis protein methyltransferase1e-32140
NC_016026:468311:486885486885487700816Micavibrio aeruginosavorus ARL-13 chromosome, complete genomecheR methyltransferase, all-alpha domain-containing protein9e-33140
NC_017030:6912830:692833469283346929230897Corallococcus coralloides DSM 2259 chromosome, complete genomechemotaxis protein CheR8e-33140
NC_013037:6209424:6240723624072362449374215Dyadobacter fermentans DSM 18053, complete genomeMCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor1e-32139
NC_013741:1144592:116830811683081169144837Archaeoglobus profundus DSM 5631, complete genomeMCP methyltransferase, CheR-type3e-32139
NC_000917:940088:944369944369945181813Archaeoglobus fulgidus DSM 4304, complete genomechemotaxis protein methyltransferase (cheR)4e-32138
NC_015172:1161000:116731511673151168130816Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMCP methyltransferase, CheR-type1e-31137
NC_004557:1826977:184411918441191844892774Clostridium tetani E88, complete genomechemotaxis protein methyltransferase cheR9e-32137
NC_010520:2937981:295885529588552959625771Clostridium botulinum A3 str. Loch Maree, complete genomechemotaxis protein methyltransferase CheR1e-31136
NC_012658:2930244:295092729509272951697771Clostridium botulinum Ba4 str. 657 chromosome, complete genomechemotaxis protein methyltransferase CheR2e-31136
NC_009495:2876865:289935328993532900123771Clostridium botulinum A str. ATCC 3502 chromosome, complete genomechemotaxis protein CheR4e-31135
NC_009697:2790277:281276528127652813535771Clostridium botulinum A str. ATCC 19397 chromosome, completechemotaxis protein methyltransferase CheR4e-31135
NC_009698:2727203:274969127496912750461771Clostridium botulinum A str. Hall chromosome, complete genomechemotaxis protein CheR4e-31135
NC_016818:1963875:198342619834261984298873Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completemethylase of chemotaxis methyl-accepting protein4e-31135
NC_015474:1035834:104094810409481041790843Pyrococcus sp. NA2 chromosome, complete genomechemotaxis protein methyltransferase3e-31135
NC_021182:2921000:294283229428322943599768Clostridium pasteurianum BC1, complete genomemethylase of chemotaxis methyl-accepting protein6e-31134
NC_015680:1315040:134942113494211350272852Pyrococcus yayanosii CH1 chromosome, complete genomechemotaxis protein methyltransferase6e-31134
NC_010516:2900057:291849929184992919269771Clostridium botulinum B1 str. Okra, complete genomechemotaxis protein methyltransferase CheR1e-30133
NC_009997:3661083:366779236677923668631840Shewanella baltica OS195, complete genomeMCP methyltransferase, CheR-type2e-30133
NC_009699:2901497:292303229230322923802771Clostridium botulinum F str. Langeland chromosome, complete genomechemotaxis protein methyltransferase CheR4e-30132
NC_017297:2905138:292316929231692923939771Clostridium botulinum F str. 230613 chromosome, complete genomechemotaxis protein methyltransferase CheR4e-30132
NC_013849:933913:939214939214940017804Ferroglobus placidus DSM 10642 chromosome, complete genomeMCP methyltransferase, CheR-type3e-30132
NC_012563:3090954:311344231134423114212771Clostridium botulinum A2 str. Kyoto, complete genomechemotaxis protein methyltransferase CheR3e-30132
NC_016751:1700164:170619117061911707009819Marinitoga piezophila KA3 chromosome, complete genomemethylase of chemotaxis methyl-accepting protein2e-30132
NC_004460:1237129:125983712598371260691855Vibrio vulnificus CMCP6 chromosome II, complete sequenceMethylase of chemotaxis methyl-accepting protein2e-30132
NC_017095:1429298:143083814308381431692855Fervidobacterium pennivorans DSM 9078 chromosome, complete genomemethylase of chemotaxis methyl-accepting protein4e-30131
NC_012880:1765920:179987917998791800751873Dickeya dadantii Ech703, complete genomeMCP methyltransferase, CheR-type7e-30130
NC_000961:435489:438529438529439371843Pyrococcus horikoshii OT3, complete genomechemotaxis protein methyltransferase7e-30130
NC_015690:6521740:6522775652277565263713597Paenibacillus mucilaginosus KNP414 chromosome, complete genomesignal transduction histidine kinase with CheB and CheR activity9e-30130
NC_009049:1125681:113374811337481134665918Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceProtein-glutamate O-methyltransferase3e-29129
NC_013421:2004088:202247120224712023343873Pectobacterium wasabiae WPP163, complete genomeMCP methyltransferase, CheR-type3e-29129
NC_012917:2971702:297318229731822974054873Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMCP methyltransferase, CheR-type2e-29129
NC_009718:1183816:120427712042771205056780Fervidobacterium nodosum Rt17-B1, complete genomeprotein-glutamate O-methyltransferase2e-29129
NC_015424:2917817:292766129276612928485825Aeromonas veronii B565 chromosome, complete genomeCheR methyltransferase2e-29129
NC_011963:742158:748182748182749099918Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCheR1 protein3e-29128
NC_010334:1701957:172320817232081724041834Shewanella halifaxensis HAW-EB4, complete genomeMCP methyltransferase, CheR-type4e-29128
NC_014562:1772842:180002218000221800894873Pantoea vagans C9-1 chromosome, complete genomechemotaxis protein methyltransferase cheR5e-29128
NC_014328:1046958:105308510530851053852768Clostridium ljungdahlii ATCC 49587 chromosome, complete genomechemotaxis protein methyltransferase1e-28127
NC_015172:2628128:267763626776362678436801Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMCP methyltransferase, CheR-type1e-28127
NC_015636:1455700:145939914593991460223825Methanothermococcus okinawensis IH1 chromosome, complete genomeMCP methyltransferase, CheR-type7e-29127
NC_021184:2238500:224767822476782248451774Desulfotomaculum gibsoniae DSM 7213, complete genomemethylase of chemotaxis methyl-accepting protein6e-29127
NC_020291:4944835:499974549997455000512768Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomechemotaxis protein methyltransferase CheR2e-28126
NC_008570:1094442:111172311117231112526804Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeCheR methyltransferase, SAM binding domain protein2e-28126
NC_009092:1504363:155366915536691554502834Shewanella loihica PV-4, complete genomeMCP methyltransferase, CheR-type1e-28126
NC_019745:3066177:3068491306849130698851395Gloeocapsa sp. PCC 7428, complete genomeMCP methyltransferase, CheR-type with PAS/PAC sensor1e-28126
NC_015064:1238899:125620012562001257027828Acidobacterium sp. MP5ACTX9 chromosome, complete genomeMCP methyltransferase, CheR-type1e-28126
NC_009428:1827352:184358818435881844472885Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeprotein-glutamate O-methyltransferase3e-28125
NC_014500:3071764:308110730811073081979873Dickeya dadantii 3937 chromosome, complete genomechemotaxis protein methyltransferase CheR9e-28124
NC_020389:1346358:135332113533211354223903Methanosarcina mazei Tuc01, complete genomeChemotaxis protein methyltransferase CheR7e-28124
NC_003901:1568000:157831615783161579218903Methanosarcina mazei Go1, complete genomechemotaxis protein methyltransferase7e-28124
NC_007298:778723:802200802200803102903Dechloromonas aromatica RCB, complete genomeMCP methyltransferase, CheR-type5e-28124
NC_012968:1352463:135734313573431358227885Methylotenera mobilis JLW8, complete genomeMCP methyltransferase, CheR-type1e-27123
NC_014623:1074299:1074299107429910758041506Stigmatella aurantiaca DW4/3-1 chromosome, complete genomemethyltransferase cher chemotaxis protein2e-27122
NC_007626:3522265:3613896361389636184284533Magnetospirillum magneticum AMB-1, complete genomeHypothetical 1041 kDa protein in hypE 3'region2e-27122
NC_008343:1250869:1258228125822812616743447Granulibacter bethesdensis CGDNIH1, complete genomechemotaxis protein methyltransferase5e-27121
NC_008752:3902637:391803139180313918834804Acidovorax avenae subsp. citrulli AAC00-1, complete genomeMCP methyltransferase, CheR-type5e-27121
NC_014315:1668366:1676756167675616804573702Nitrosococcus watsoni C-113 chromosome, complete genomediguanylate cyclase with PAS/PAC sensor5e-27121
NC_014315:114151:123249123249124097849Nitrosococcus watsoni C-113 chromosome, complete genomeMCP methyltransferase, CheR-type5e-27121
NC_015497:2997275:301565830156583016500843Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeMCP methyltransferase, CheR-type7e-27120
NC_013592:1668092:170383217038321704704873Dickeya dadantii Ech586, complete genomeMCP methyltransferase, CheR-type8e-27120
NC_009634:299327:301083301083301922840Methanococcus vannielii SB chromosome, complete genomeprotein-glutamate O-methyltransferase9e-27120
NC_014166:1751906:176871617687161769558843Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeMCP methyltransferase, CheR-type1e-26120
NC_011653:1226035:125397712539771254789813Thermosipho africanus TCF52B, complete genomechemotaxis protein methyltransferase2e-26119
NC_015138:3927411:392865639286563929459804Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeMCP methyltransferase, CheR-type5e-26118
NC_009616:979861:100679610067961007608813Thermosipho melanesiensis BI429 chromosome, complete genomeprotein-glutamate O-methyltransferase8e-26117
NC_014972:2089003:209538120953812096133753Desulfobulbus propionicus DSM 2032 chromosome, complete genomeCheR-type MCP methyltransferase7e-26117
NC_012526:300126:3001263001263031553030Deinococcus deserti VCD115, complete genomeputative PAS:CheB methylesterase:MCP methyltransferase, CheR-type6e-26117
NC_007626:3996000:4016777401677740196472871Magnetospirillum magneticum AMB-1, complete genomeHypothetical 1041 kDa protein in hypE 3'region2e-25116
NC_008593:1060548:107509710750971075864768Clostridium novyi NT, complete genomechemotaxis protein methyltransferase cheR2e-25116
NC_011884:3099488:3099488309948831013411854Cyanothece sp. PCC 7425, complete genomeMCP methyltransferase, CheR-type with PAS/PAC sensor2e-25116
NC_015138:3160764:3160764316076431653684605Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completesignal transduction histidine kinase with CheB and CheR activity4e-25115
NC_009464:2687445:272356027235602724414855Uncultured methanogenic archaeon RC-I, complete genomechemotaxis MCP methyltransferase4e-25115
NC_016112:2903767:2923171292317129258102640Methylomicrobium alcaliphilum chromosome, complete genomechemotaxis protein CheR4e-25115
NC_013768:721897:722705722705723493789Listeria monocytogenes 08-5923, complete genomehypothetical protein1e-24114
NC_014533:1:2357235735951239Cyanothece sp. PCC 7822 plasmid Cy782201, complete sequenceCheR-type MCP methyltransferase7e-25114
NC_013854:1277106:1291266129126612958824617Azospirillum sp. B510, complete genometwo-component hybrid sensor and regulator, CheB glutamate methylesterase7e-25114
NC_014836:1052214:1072744107274410765893846Desulfurispirillum indicum S5 chromosome, complete genomePAS sensor protein1e-24113
NC_009483:2489000:252419225241922525070879Geobacter uraniireducens Rf4 chromosome, complete genomeprotein-glutamate O-methyltransferase1e-24113
NC_002973:730942:732970732970733758789Listeria monocytogenes str. 4b F2365, complete genomechemotaxis protein methyltransferase CheR1e-24113
NC_008752:2615360:2636818263681826414254608Acidovorax avenae subsp. citrulli AAC00-1, complete genomesignal transduction histidine kinase with CheB and CheR activity4e-24112
NC_013851:859396:8765758765758792142640Allochromatium vinosum DSM 180 chromosome, complete genomeMCP methyltransferase/methylesterase, CheR/CheB1e-23110
NC_008095:5062491:5083267508326750850481782Myxococcus xanthus DK 1622, complete genomeprotein methyltransferase FrzF1e-23110
NC_007484:130896:138503138503139351849Nitrosococcus oceani ATCC 19707, complete genomeMCP methyltransferase, CheR-type1e-23110
NC_015136:1101725:1101725110172511059364212Burkholderia sp. CCGE1001 chromosome 1, complete sequencesignal transduction histidine kinase with CheB and CheR activity2e-23109
NC_019940:1727384:1727384172738417329335550Thioflavicoccus mobilis 8321 chromosome, complete genomePAS domain-containing protein4e-23108
NC_012796:2041579:2056610205661020598373228Desulfovibrio magneticus RS-1, complete genomeputative chemotaxis CheB/CheR fusion protein6e-23107
NC_016599:144844:168427168427169275849Owenweeksia hongkongensis DSM 17368 chromosome, complete genomemethylase of chemotaxis methyl-accepting protein7e-23107
NC_013939:913890:9492899492899505271239Deferribacter desulfuricans SSM1, complete genomehypothetical protein9e-23107
NC_015391:2099472:210503521050352105805771Carnobacterium sp. 17-4 chromosome, complete genomemethyl-accepting chemotaxis proteins (MCPs) methyltransferase1e-22107
NC_019892:376000:391933391933392769837Singulisphaera acidiphila DSM 18658 chromosome, complete genomemethylase of chemotaxis methyl-accepting protein2e-22106
NC_009617:4946000:496197949619794962692714Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeprotein-glutamate O-methyltransferase3e-22105
NC_013859:61586:7556275562787053144Azospirillum sp. B510 plasmid pAB510e, complete sequencechemotaxis protein methyltransferase1e-21103
NC_019940:3089884:3108537310853731114792943Thioflavicoccus mobilis 8321 chromosome, complete genomemethylase of chemotaxis methyl-accepting protein1e-21103
NC_011899:2165814:218773521877352188526792Halothermothrix orenii H 168, complete genomeProtein-glutamate O-methyltransferase2e-21102
NC_018691:2410779:242648324264832427349867Alcanivorax dieselolei B5 chromosome, complete genomeCheR methyltransferase, SAM binding domain protein3e-21102
NC_011060:1746000:1746059174605917490402982Pelodictyon phaeoclathratiforme BU-1, complete genomeMCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor6e-21101
NC_010510:534024:5525225525225560133492Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeMCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor1e-20100
NC_012796:4075583:4143009414300941475594551Desulfovibrio magneticus RS-1, complete genomeputative chemotaxis CheB/CheR fusion protein2e-2099.8
NC_008340:1303607:1308051130805113106092559Alkalilimnicola ehrlichei MLHE-1, complete genomeMCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor2e-2099.4
NC_011653:1463743:1466772146677214677851014Thermosipho africanus TCF52B, complete genomechemotaxis protein methyltransferase CheR2e-2099.4
NC_013859:61586:8658286582912164635Azospirillum sp. B510 plasmid pAB510e, complete sequencetwo-component hybrid sensor and regulator modulated chemotaxis protein methyltransferase6e-1994.7
NC_013440:1879306:1885536188553618908155280Haliangium ochraceum DSM 14365, complete genomesignal transduction histidine kinase with CheB and CheR activity2e-1686.3
NC_014216:1197704:122277512227751223620846Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeMCP methyltransferase, CheR-type7e-1684.7
NC_020209:1903830:190732519073251908155831Pseudomonas poae RE*1-1-14, complete genomeputative chemotaxis protein methyltransferase3e-1582.4
NC_015376:3249773:326906232690623269916855Burkholderia gladioli BSR3 chromosome chromosome 2, completeMCP methyltransferase, CheR-type5e-1375.1
NC_008609:2933468:295549629554962956113618Pelobacter propionicus DSM 2379, complete genomeMCP methyltransferase, CheR-type2e-1169.7
NC_012796:4693500:4702944470294447042961353Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-0860.1
NC_013173:1609123:161425116142511614916666Desulfomicrobium baculatum DSM 4028, complete genomeMCP methyltransferase, CheR-type3e-0859.3