Pre_GI: BLASTP Hits

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Query: NC_009012:3324000:3324051 Clostridium thermocellum ATCC 27405, complete genome

Start: 3324051, End: 3325652, Length: 1602

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014804:803510:8200958200958216751581Thermococcus barophilus MP chromosome, complete genomelysyl-tRNA synthetase, class I2e-84313
NC_010673:703816:7046457046457062101566Borrelia hermsii DAH, complete genomeclass 1 lysyl-tRNA synthetase7e-83308
NC_012883:104987:1204601204601220401581Thermococcus sibiricus MM 739, complete genomeLysyl-tRNA synthetase1e-81304
NC_015732:2839030:2839030283903028406131584Spirochaeta caldaria DSM 7334 chromosome, complete genomeLysyl-tRNA synthetase1e-81303
NC_015474:644552:6612546612546628251572Pyrococcus sp. NA2 chromosome, complete genomelysyl-tRNA synthetase3e-81302
NC_015680:1475917:1489940148994014914991560Pyrococcus yayanosii CH1 chromosome, complete genomelysyl-tRNA synthetase1e-79297
NC_012804:1940500:1941193194119319427701578Thermococcus gammatolerans EJ3, complete genomeLysyl-tRNA synthetase (lysS)2e-79296
NC_006624:2016000:2030507203050720320871581Thermococcus kodakarensis KOD1, complete genomelysyl-tRNA synthetase7e-79295
NC_000868:196015:2120282120282136081581Pyrococcus abyssi GE5, complete genomelysyl-tRNA synthetase1e-78294
NC_006156:685344:7003217003217018861566Borrelia garinii PBi chromosome linear, complete sequencelysyl-tRNA synthetase6e-78291
NC_003413:128228:1446071446071461781572Pyrococcus furiosus DSM 3638, complete genomelysyl-tRNA synthetase2e-77290
NC_015436:1758257:1758257175825717598491593Spirochaeta coccoides DSM 17374 chromosome, complete genomelysyl-tRNA synthetase2e-77290
NC_016633:2688144:2705444270544427070181575Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomelysyl-tRNA synthetase, archaeal and spirochete4e-76286
NC_011661:938754:9522099522099537831575Dictyoglomus turgidum DSM 6724, complete genomelysyl-tRNA synthetase9e-63241
NC_011297:767333:7812697812697828431575Dictyoglomus thermophilum H-6-12, complete genomelysyl-tRNA synthetase2e-60234
NC_013407:1205747:1224796122479612263851590Methanocaldococcus vulcanius M7, complete genomelysyl-tRNA synthetase9e-60231
NC_013156:728397:7387717387717403631593Methanocaldococcus fervens AG86, complete genomelysyl-tRNA synthetase2e-59230
NC_000909:467607:4748294748294764211593Methanocaldococcus jannaschii DSM 2661, complete genometRNA synthetase, putative1e-58228
NC_015416:1645419:1661739166173916632381500Methanosaeta concilii GP-6 chromosome, complete genomelysyl-tRNA synthetase2e-55216
NC_015574:114426:1270091270091285861578Methanobacterium sp. SWAN-1 chromosome, complete genomeLysyl-tRNA synthetase2e-54213
NC_005213:63752:8253682536843231788Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein3e-47189
NC_007798:652317:6885356885356900521518Neorickettsia sennetsu str. Miyayama, complete genomelysyl-tRNA synthetase3e-32140
NC_013009:689978:7064777064777079941518Neorickettsia risticii str. Illinois, complete genomelysyl-tRNA synthetase5e-30132
NC_007643:578808:5919165919165935681653Rhodospirillum rubrum ATCC 11170, complete genomeLysine--tRNA ligase9e-30132
NC_009484:775828:7888817888817904401560Acidiphilium cryptum JF-5 chromosome, complete genomelysyl-tRNA synthetase4e-27123