Pre_GI: BLASTP Hits

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Query: NC_009012:3224000:3228762 Clostridium thermocellum ATCC 27405, complete genome

Start: 3228762, End: 3230639, Length: 1878

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:762000:7816387816387834941857Clostridium clariflavum DSM 19732 chromosome, complete genomeExcinuclease ABC subunit C0951
NC_014410:615992:6340876340876359401854Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,excinuclease ABC, C subunit0669
NC_021182:3576815:3577986357798635798631878Clostridium pasteurianum BC1, complete genomeexcinuclease ABC, C subunit0654
NC_012781:629761:6351856351856370591875Eubacterium rectale ATCC 33656, complete genomeexcinuclease ABC subunit C0642
NC_014328:303063:3253243253243271921869Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeexcinuclease ABC subunit C0635
NC_013216:4131563:4131563413156341334371875Desulfotomaculum acetoxidans DSM 771, complete genomeexcinuclease ABC, C subunit1e-179630
NC_014377:1400544:1415164141516414169841821Thermosediminibacter oceani DSM 16646 chromosome, complete genomeExcinuclease ABC subunit C8e-178624
NC_012778:2049694:2062015206201520638531839Eubacterium eligens ATCC 27750, complete genomeexcinuclease ABC subunit C1e-177623
NC_008262:381323:4009754009754028371863Clostridium perfringens SM101, complete genomeexcinuclease ABC, C subunit3e-177622
NC_010001:404066:4091624091624110481887Clostridium phytofermentans ISDg, complete genomeexcinuclease ABC, C subunit1e-171603
NC_015437:697051:6981256981256999481824Selenomonas sputigena ATCC 35185 chromosome, complete genomeUvrABC system protein C3e-162572
NC_009253:3317533:3318631331863133203971767Desulfotomaculum reducens MI-1 chromosome, complete genomeexcinuclease ABC subunit C5e-160564
NC_012034:390273:4163654163654181461782Anaerocellum thermophilum DSM 6725, complete genomeexcinuclease ABC, C subunit7e-151534
NC_007955:1523500:1542479154247915442931815Methanococcoides burtonii DSM 6242, complete genomeexcinuclease ABC, C subunit3e-131469
NC_011969:4235818:4239869423986942416531785Bacillus cereus Q1 chromosome, complete genomeexcinuclease ABC subunit C2e-126452
NC_011658:4301633:4307039430703943088231785Bacillus cereus AH187 chromosome, complete genomeexcinuclease ABC subunit C1e-125451
NC_005957:4311679:4317086431708643188701785Bacillus thuringiensis serovar konkukian str. 97-27, completeexcinuclease ABC subunit C2e-125449
NC_008789:7347:2329123291251321842Halorhodospira halophila SL1, complete genomeexcinuclease ABC, C subunit4e-125449
NC_011297:1296968:1311065131106513128641800Dictyoglomus thermophilum H-6-12, complete genomeexcinuclease ABC subunit C9e-124444
NC_007681:657351:6612786612786630741797Methanosphaera stadtmanae DSM 3091, complete genomeUvrC2e-121436
NC_021175:997618:1011696101169610135281833Streptococcus oligofermentans AS 1.3089, complete genomeexcinuclease ABC subunit C6e-119428
NC_019940:2893535:2896540289654028983601821Thioflavicoccus mobilis 8321 chromosome, complete genomeexcinuclease ABC subunit C1e-118427
NC_009009:1295607:1313231131323113150661836Streptococcus sanguinis SK36, complete genomeNuclease subunit of the excinuclease complex, subunit C, putative2e-118426
NC_008312:5105557:5124169512416951260371869Trichodesmium erythraeum IMS101, complete genomeexcinuclease ABC, C subunit3e-118426
NC_014643:2056280:2074284207428420762571974Rothia dentocariosa ATCC 17931 chromosome, complete genomeexcision endonuclease subunit UvrC1e-117424
NC_002976:707827:7278887278887296721785Staphylococcus epidermidis RP62A, complete genomeexcinuclease ABC subunit C9e-117421
NC_004461:813748:8338038338038356051803Staphylococcus epidermidis ATCC 12228, complete genomeexcinuclease ABC subunit C1e-116420
NC_014761:743113:7612637612637630561794Oceanithermus profundus DSM 14977 chromosome, complete genomeexcinuclease ABC subunit c6e-114411
NC_014248:943198:9637689637689656451878Nostoc azollae 0708 chromosome, complete genomeexcinuclease ABC subunit C5e-113409
NC_007484:1823751:1838148183814818399471800Nitrosococcus oceani ATCC 19707, complete genomeExcinuclease ABC, C subunit4e-113409
NC_013715:1207774:1246840124684012487801941Rothia mucilaginosa DY-18, complete genomenuclease subunit of the excinuclease complex2e-112407
NC_016802:1256287:1300052130005213021152064Corynebacterium diphtheriae HC02 chromosome, complete genomeexcinuclease ABC subunit C4e-110399
NC_016787:1276983:1288572128857212906352064Corynebacterium diphtheriae HC03 chromosome, complete genomeexcinuclease ABC subunit C4e-110399
NC_016783:1313008:1323452132345213255152064Corynebacterium diphtheriae INCA 402 chromosome, complete genomeexcinuclease ABC subunit C4e-110399
NC_016785:1270295:1280739128073912828022064Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeexcinuclease ABC subunit C5e-110399
NC_016789:1334514:1344959134495913470222064Corynebacterium diphtheriae PW8 chromosome, complete genomeexcinuclease ABC subunit C7e-110398
NC_016782:1293452:1299153129915313012162064Corynebacterium diphtheriae 241 chromosome, complete genomeexcinuclease ABC subunit C2e-109397
NC_016786:1293421:1299122129912213011852064Corynebacterium diphtheriae HC01 chromosome, complete genomeexcinuclease ABC subunit C2e-109397
NC_016799:1343020:1354608135460813566712064Corynebacterium diphtheriae 31A chromosome, complete genomeexcinuclease ABC subunit C1e-109397
NC_002935:1315019:1325463132546313275262064Corynebacterium diphtheriae NCTC 13129, complete genomeexcinuclease ABC subunit C1e-109397
NC_016800:1317276:1327720132772013297832064Corynebacterium diphtheriae BH8 chromosome, complete genomeexcinuclease ABC subunit C1e-109397
NC_016801:1333860:1344283134428313463462064Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeexcinuclease ABC subunit C4e-109395
NC_016790:1259356:1265951126595112680142064Corynebacterium diphtheriae VA01 chromosome, complete genomeexcinuclease ABC subunit C5e-109395
NC_015733:3923800:3937130393713039389531824Pseudomonas putida S16 chromosome, complete genomeexcinuclease ABC subunit C9e-109394
NC_008783:507939:5241045241045260801977Bartonella bacilliformis KC583, complete genomeexcinuclease ABC, C subunit8e-109394
NC_016788:1286974:1298563129856313006262064Corynebacterium diphtheriae HC04 chromosome, complete genomeexcinuclease ABC subunit C8e-109394
NC_014837:1570500:1575327157532715771591833Pantoea sp. At-9b chromosome, complete genomeexcinuclease ABC subunit C8e-108391
NC_015186:573289:5828225828225847261905Acidiphilium multivorum AIU301, complete genomeUvrABC system protein C6e-105382
NC_016514:2950860:2950860295086029526921833Enterobacter cloacae EcWSU1 chromosome, complete genomeUvrABC system protein C2e-104380
NC_009484:464342:4739174739174757791863Acidiphilium cryptum JF-5 chromosome, complete genomeexcinuclease ABC subunit C2e-104380
NC_007205:60069:98509985091003441836Candidatus Pelagibacter ubique HTCC1062, complete genomeexcinuclease ABC subunit C1e-104380
NC_014963:2972358:2984227298422729862241998Terriglobus saanensis SP1PR4 chromosome, complete genomeexcinuclease ABC subunit C4e-104379
NC_006155:2084669:2094073209407320959051833Yersinia pseudotuberculosis IP 32953, complete genomeexcinuclease ABC subunit C5e-104379
NC_004129:4093610:4108688410868841105111824Pseudomonas fluorescens Pf-5, complete genomeexcinuclease ABC subunit C5e-104379
NC_008149:2517538:2537676253767625395291854Yersinia pestis Nepal516, complete genomeexcinuclease ABC subunit C9e-104378
NC_005810:1663672:1675022167502216768751854Yersinia pestis biovar Microtus str. 91001, complete genomeexcinuclease ABC subunit C9e-104378
NC_004088:2691565:2702549270254927044021854Yersinia pestis KIM, complete genomeexcinuclease ABC subunit C9e-104378
NC_008150:1384102:1395505139550513973581854Yersinia pestis Antiqua, complete genomeexcinuclease ABC subunit C9e-104378
NC_010465:2582080:2588123258812325899761854Yersinia pseudotuberculosis YPIII, complete genomeexcinuclease ABC, C subunit9e-104378
NC_006512:696000:7100437100437118811839Idiomarina loihiensis L2TR, complete genomeexcinuclease ABC subunit C9e-104378
NC_009381:1414985:1421906142190614237591854Yersinia pestis Pestoides F chromosome, complete genomeexcinuclease ABC subunit C9e-104378
NC_003143:2101902:2112447211244721142791833Yersinia pestis CO92, complete genomeexcinuclease ABC subunit C8e-104378
NC_009708:2537557:2558158255815825599901833Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeexcinuclease ABC subunit C8e-104378
NC_017168:3535786:3546734354673435485661833Yersinia pestis A1122 chromosome, complete genomeexcinuclease ABC subunit C8e-104378
NC_017265:2306500:2322731232273123245631833Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,excinuclease ABC subunit C8e-104378
NC_016816:2953530:2979594297959429813601767Pantoea ananatis LMG 5342, complete genomeexcinuclease ABC subunit C7e-104378
NC_009883:641491:6518316518316537321902Rickettsia bellii OSU 85-389, complete genomeexcinuclease ABC subunit C7e-104378
NC_007940:669143:6794776794776813841908Rickettsia bellii RML369-C, complete genomeExcinuclease ABC subunit C6e-104378
NC_008463:2654014:2656149265614926579751827Pseudomonas aeruginosa UCBPP-PA14, complete genomeexcinuclease ABC subunit C1e-103377
NC_012967:1967675:1970867197086719726331767Escherichia coli B str. REL606 chromosome, complete genomeexcinuclease ABC subunit C1e-103377
NC_010159:2128157:2139470213947021413231854Yersinia pestis Angola, complete genomeUvrABC system, C protein1e-103377
NC_015224:2061951:2075674207567420775061833Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,excinuclease ABC subunit C2e-103376
NC_020064:1854589:1860491186049118623231833Serratia marcescens FGI94, complete genomeExcinuclease ABC subunit C5e-103375
NC_008800:2013450:2014497201449720163291833Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,excinuclease ABC subunit C6e-103375
NC_014394:1658357:1678903167890316807081806Gallionella capsiferriformans ES-2 chromosome, complete genomeexcinuclease ABC, C subunit2e-102373
NC_015222:2475792:2475792247579224776091818Nitrosomonas sp. AL212 chromosome, complete genomeUvrABC system protein C5e-102372
NC_012779:2184927:2184927218492721867591833Edwardsiella ictaluri 93-146, complete genomeexcinuclease ABC subunit C, putative3e-102372
NC_007492:3462929:3507583350758335094061824Pseudomonas fluorescens PfO-1, complete genomeexcinuclease ABC subunit C8e-102371
NC_020829:3050817:3066459306645930682851827Pseudomonas denitrificans ATCC 13867, complete genomeexcinuclease ABC subunit C1e-101370
NC_015566:1941407:1948989194898919508211833Serratia sp. AS12 chromosome, complete genomeUvrABC system protein C2e-101370
NC_009436:2685910:2697769269776926995921824Enterobacter sp. 638, complete genomeexcinuclease ABC subunit C2e-101370
NC_013517:1249466:1249466124946612512501785Sebaldella termitidis ATCC 33386, complete genomeexcinuclease ABC, C subunit4e-101369
NC_007298:2170181:2188218218821821900291812Dechloromonas aromatica RCB, complete genomeExcinuclease ABC, C subunit9e-101368
NC_015379:2417312:2420973242097324227961824Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,uvrABC system protein C2e-100367
NC_013508:2130681:2157449215744921592151767Edwardsiella tarda EIB202, complete genomeexcinuclease ABC subunit C2e-100367
NC_004547:3207776:3228642322864232304741833Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeexcinuclease ABC subunit C3e-100366
NC_012912:1701231:1737401173740117392331833Dickeya zeae Ech1591, complete genomeexcinuclease ABC, C subunit7e-100365
NC_016830:3869572:3870777387077738726001824Pseudomonas fluorescens F113 chromosome, complete genomeexcinuclease ABC subunit C5e-100365
NC_013592:1668092:1681178168117816830101833Dickeya dadantii Ech586, complete genomeexcinuclease ABC, C subunit4e-100365
NC_007086:2408837:2411546241154624134021857Xanthomonas campestris pv. campestris str. 8004, complete genomeexcinuclease ABC subunit C9e-100364
NC_003902:2469500:2497905249790524997611857Xanthomonas campestris pv. campestris str. ATCC 33913, completeexcinuclease ABC subunit C9e-100364
NC_011894:3797500:3811599381159938136052007Methylobacterium nodulans ORS 2060, complete genomeexcinuclease ABC, C subunit2e-99363
NC_010688:2400471:2402374240237424042301857Xanthomonas campestris pv. campestris, complete genomeexcinuclease ABC subunit C2e-99363
NC_015164:2777008:2794487279448727962951809Bacteroides salanitronis DSM 18170 chromosome, complete genomeUvrABC system protein C3e-99362
NC_012880:1711062:1720074172007417219061833Dickeya dadantii Ech703, complete genomeexcinuclease ABC, C subunit4e-99362
NC_014029:2388500:2395785239578523975511767Yersinia pestis Z176003 chromosome, complete genomeexcinuclease ABC subunit C1e-98361
NC_017154:2100587:2112055211205521138211767Yersinia pestis D106004 chromosome, complete genomeexcinuclease ABC subunit C1e-98361
NC_014500:3097362:3120213312021331220451833Dickeya dadantii 3937 chromosome, complete genomeExcinuclease ABC subunit C2e-98360
NC_008577:1885809:1889881188988118917101830Shewanella sp. ANA-3 chromosome 1, complete sequenceexcinuclease ABC, C subunit2e-98360
NC_008322:1898000:1899519189951919013481830Shewanella sp. MR-7, complete genomeexcinuclease ABC, C subunit3e-98359
NC_003919:2435058:2440833244083324426921860Xanthomonas axonopodis pv. citri str. 306, complete genomeexcinuclease ABC subunit C2e-97357
NC_007712:1954808:1970559197055919723911833Sodalis glossinidius str. 'morsitans', complete genomeexcinuclease ABC subunit C1e-96354
NC_013446:1889500:1890738189073818926901953Comamonas testosteroni CNB-2, complete genomeexcinuclease ABC, C subunit2e-92340
NC_008942:915871:9331889331889347501563Methanocorpusculum labreanum Z, complete genomehypothetical protein4e-92339
NC_015571:260664:2745392745392763411803Porphyromonas gingivalis TDC60, complete genomeexcinuclease ABC, C subunit1e-91337
NC_010729:2147268:2162152216215221639541803Porphyromonas gingivalis ATCC 33277, complete genomeexcinuclease ABC C subunit3e-91336
NC_002950:2068500:2083461208346120852601800Porphyromonas gingivalis W83, complete genomeexcinuclease ABC, C subunit6e-91335
NC_008782:2781229:2794646279464627966191974Acidovorax sp. JS42, complete genomeexcinuclease ABC, C subunit7e-91335
NC_011992:1234610:1242927124292712449001974Acidovorax ebreus TPSY, complete genomeexcinuclease ABC, C subunit1e-90334
NC_013192:664408:6653056653056670891785Leptotrichia buccalis DSM 1135, complete genomeexcinuclease ABC, C subunit4e-90332
NC_015638:923660:9377909377909395921803Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeUvrABC system protein C2e-89330
NC_015422:1694363:1710338171033817122961959Alicycliphilus denitrificans K601 chromosome, complete genomeexcinuclease ABC subunit C4e-88325
NC_010508:1206498:1206498120649812085462049Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceexcinuclease ABC, C subunit2e-87323
NC_010003:2029416:2038003203800320397271725Petrotoga mobilis SJ95, complete genomeexcinuclease ABC, C subunit6e-87322
NC_008011:860000:8796858796858815501866Lawsonia intracellularis PHE/MN1-00, complete genomeNuclease subunit of the excinuclease complex3e-86320
NC_006833:449132:4718254718254736451821Wolbachia endosymbiont strain TRS of Brugia malayi, completeNuclease subunit of the excinuclease complex, UvrC5e-84312
NC_020388:252500:2556042556042573341731Natronomonas moolapensis 8.8.11 complete genomeUvrABC system protein C6e-83308
NC_013939:1841890:1863604186360418654301827Deferribacter desulfuricans SSM1, complete genomeexcinuclease ABC subunit C7e-81301
NC_005090:1519035:1519035151903515208431809Wolinella succinogenes DSM 1740, complete genomeexcinuclease ABC subunit C2e-80300
NC_013062:421779:4400024400024418371836Flavobacteriaceae bacterium 3519-10, complete genomeExcinuclease ABC subunit C1e-78295
NC_010673:479552:4806294806294824371809Borrelia hermsii DAH, complete genomeexcinuclease ABC subunit C3e-76286
NC_017187:750363:7513887513887532381851Arcobacter butzleri ED-1, complete genomeexcinuclease ABC subunit C3e-76286
NC_014935:416609:4365964365964383981803Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeexcinuclease abc subunit c3e-74280
NC_013922:2110894:2122421212242121242351815Natrialba magadii ATCC 43099 chromosome, complete genomeexcinuclease ABC, C subunit5e-74279
NC_017192:1028866:1028866102886610307161851Arcobacter sp. L, complete genomeexcinuclease ABC subunit C1e-67258
NC_013766:906550:9201519201519212511101Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-66253
NC_003210:870587:8841708841708852701101Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-66253
NC_010830:1069666:1090739109073910925351797Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-65250
NC_017160:2414000:2425526242552624265571032Yersinia pestis D182038 chromosome, complete genomeexcinuclease ABC subunit C2e-63244
NC_015381:1173603:1177241117724111794842244Burkholderia gladioli BSR3 chromosome 1, complete sequenceexcinuclease ABC subunit C8e-55215
NC_007951:3655088:3683290368329036855512262Burkholderia xenovorans LB400 chromosome 1, complete sequenceExcinuclease ABC, C subunit7e-54212
NC_014014:476938:4816404816404833671728Mycoplasma crocodyli MP145 chromosome, complete genomeexcinuclease UvrABC system, nuclease subunit (UvrC)4e-51202
NC_015499:197945:2168762168762185191644Thermodesulfobium narugense DSM 14796 chromosome, complete genomeexcinuclease ABC, C subunit7e-51202
NC_016148:951446:9530009530009544841485Thermovirga lienii DSM 17291 chromosome, complete genomeexcinuclease ABC subunit C1e-50201
NC_020291:4357425:4379241437924143803171077Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeUvrABC system protein C1e-46188
NC_009698:3275839:3285536328553632866331098Clostridium botulinum A str. Hall chromosome, complete genomeGIY-YIG domain-containing protein1e-41172
NC_010516:3466000:3480751348075134818481098Clostridium botulinum B1 str. Okra, complete genomeGIY-YIG domain protein2e-41171
NC_014210:3742112:3757353375735337591401788Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, epsilon subunit2e-31138
NC_015514:2414617:2418229241822924200911863Cellulomonas fimi ATCC 484 chromosome, complete genomeDNA polymerase III subunit epsilon2e-29131
NC_017160:2414000:242479224247922425529738Yersinia pestis D182038 chromosome, complete genomeexcinuclease ABC subunit C1e-28128
NC_013169:1661135:1661135166113516628891755Kytococcus sedentarius DSM 20547, complete genomeexonuclease, DNA polymerase III, epsilon subunit family6e-28126
NC_009922:411434:4117844117844128001017Alkaliphilus oremlandii OhILAs, complete genomeExcinuclease ABC C subunit domain protein4e-27123
NC_015711:3697808:3700979370097937020491071Myxococcus fulvus HW-1 chromosome, complete genomeGIY-YIG catalytic domain-containing protein1e-26122
NC_008095:7563441:7568880756888075700941215Myxococcus xanthus DK 1622, complete genomeGIY-YIG catalytic domain protein1e-26122
NC_009664:3718927:3738654373865437404591806Kineococcus radiotolerans SRS30216, complete genomeDNA polymerase III, epsilon subunit2e-26121
NC_015671:1540860:1558211155821115600791869Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDNA polymerase III subunit epsilon2e-26120
NC_014151:2312000:2313921231392123158161896Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-25118
NC_017030:6061070:6063433606343360646171185Corallococcus coralloides DSM 2259 chromosome, complete genomeGIY-YIG catalytic domain-containing protein1e-24115
NC_015588:1965787:1967662196766219693981737Isoptericola variabilis 225 chromosome, complete genomeDNA polymerase III, epsilon subunit1e-24115
NC_015731:2460248:2460248246024824616391392Nitrosomonas sp. Is79A3 chromosome, complete genomeDNA polymerase III subunit epsilon1e-1378.6
NC_015222:2475792:2494021249402124954121392Nitrosomonas sp. AL212 chromosome, complete genomeDNA polymerase III, epsilon subunit5e-1273.2
NC_020063:2230000:223870022387002239563864Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein5e-1066.6
NC_015572:2186394:2188322218832221897221401Methylomonas methanica MC09 chromosome, complete genomeDNA polymerase III subunit epsilon1e-0862