Pre_GI: BLASTP Hits

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Query: NC_009012:3224000:3226729 Clostridium thermocellum ATCC 27405, complete genome

Start: 3226729, End: 3226998, Length: 270

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:762000:779508779508779771264Clostridium clariflavum DSM 19732 chromosome, complete genomephosphotransferase system HPr (HPr) family protein1e-24111
NC_007644:3229:150311503115312282Moorella thermoacetica ATCC 39073, complete genomeHPrNtr2e-1684.3
NC_004193:2522000:252201325220132522273261Oceanobacillus iheyensis HTE831, complete genomecatabolite repression HPr-like protein1e-1478.6
NC_010520:2585014:258827325882732588530258Clostridium botulinum A3 str. Loch Maree, complete genomephosphocarrier protein HPr1e-1375.5
NC_012563:2680246:270057427005742700831258Clostridium botulinum A2 str. Kyoto, complete genomephosphocarrier protein HPr1e-1375.5
NC_010516:2511035:251428425142842514541258Clostridium botulinum B1 str. Okra, complete genomephosphocarrier protein HPr1e-1375.5
NC_009495:2524000:252606225260622526319258Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephosphocarrier protein HPr1e-1375.5
NC_009697:2394826:239808523980852398342258Clostridium botulinum A str. ATCC 19397 chromosome, completephosphocarrier protein HPr1e-1375.5
NC_009698:2367171:237043023704302370687258Clostridium botulinum A str. Hall chromosome, complete genomephosphocarrier protein HPr1e-1375.5
NC_009674:3732000:375146137514613751718258Bacillus cytotoxicus NVH 391-98 chromosome, complete genomephosphocarrier protein Chr2e-1374.3
NC_013642:942767:972165972165972425261Thermotoga naphthophila RKU-10, complete genomePhosphotransferase system, phosphocarrier protein HPr3e-1373.9
NC_010483:642577:647832647832648092261Thermotoga sp. RQ2, complete genomePhosphotransferase system, phosphocarrier protein HPr4e-1373.6
NC_015565:2827444:284259328425932842862270Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completephosphotransferase system, phosphocarrier protein HPr1e-1271.6
NC_014483:195321:213074213074213343270Paenibacillus polymyxa E681 chromosome, complete genomeHPr-like protein crh (Catabolite repression HPr)2e-1270.9
NC_010001:404066:416274416274416531258Clostridium phytofermentans ISDg, complete genomePhosphotransferase system, phosphocarrier protein HPr2e-1270.9
NC_014721:314990:321936321936322286351Caldicellulosiruptor kristjanssonii 177R1B chromosome, completephosphotransferase system, phosphocarrier protein hpr3e-1270.9
NC_009437:2579161:258085625808562581116261Caldicellulosiruptor saccharolyticus DSM 8903, complete genomephosphotransferase system, phosphocarrier protein HPr5e-1269.7
NC_015949:2156843:217325721732572173595339Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomephosphotransferase system, phosphocarrier protein HPr6e-1269.3
NC_008261:2157713:215938621593862159646261Clostridium perfringens ATCC 13124, complete genomephosphocarrier, HPr family8e-1268.9
NC_014654:1802007:180703118070311807309279Halanaerobium sp. 'sapolanicus' chromosome, complete genomePhosphotransferase system, phosphocarrier protein HPr9e-1268.9
NC_014829:3772914:377407637740763774333258Bacillus cellulosilyticus DSM 2522 chromosome, complete genomePhosphotransferase system, phosphocarrier protein HPr1e-1168.2
NC_013517:1849912:186357818635781863838261Sebaldella termitidis ATCC 33386, complete genomePhosphotransferase system, phosphocarrier protein HPr2e-1168.2
NC_008639:2786447:281852228185222818833312Chlorobium phaeobacteroides DSM 266, complete genomePhosphotransferase system, phosphocarrier protein HPr4e-1167
NC_011060:244949:248225248225248491267Pelodictyon phaeoclathratiforme BU-1, complete genomePhosphotransferase system, phosphocarrier protein HPr3e-1167
NC_014624:171394:176252176252176527276Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein5e-1166.6
NC_006177:1060428:107142410714241071681258Symbiobacterium thermophilum IAM 14863, complete genomePTS system phosphocarrier protein Hpr9e-1165.5
NC_011899:2165814:217334321733432173627285Halothermothrix orenii H 168, complete genomePhosphotransferase system, phosphocarrier protein HPr1e-1065.5
NC_012108:2159230:216057821605782160868291Desulfobacterium autotrophicum HRM2, complete genomePtsH1e-1065.1
NC_010622:249625:305289305289305558270Burkholderia phymatum STM815 chromosome 1, complete sequencePhosphotransferase system, phosphocarrier protein HPr2e-1064.7
NC_012559:2854640:285819228581922858461270Laribacter hongkongensis HLHK9, complete genomePtsH3e-1063.9
NC_007530:4853740:487268348726834872931249Bacillus anthracis str. 'Ames Ancestor', complete genomephosphocarrier protein hpr3e-1063.9
NC_005945:4854951:487389448738944874142249Bacillus anthracis str. Sterne, complete genomephosphocarrier protein HPr3e-1063.9
NC_003997:4852332:487255748725574872805249Bacillus anthracis str. Ames, complete genomephosphocarrier protein HPr3e-1063.9
NC_003909:4831000:484954948495494849797249Bacillus cereus ATCC 10987, complete genomephosphocarrier protein HPr3e-1063.9
NC_008600:4868000:488575248857524886000249Bacillus thuringiensis str. Al Hakam, complete genomephosphocarrier protein HPr3e-1063.9
NC_011773:4914601:493505349350534935301249Bacillus cereus AH820 chromosome, complete genomephosphocarrier protein Chr3e-1063.9
NC_012581:4856620:487500648750064875254249Bacillus anthracis str. CDC 684 chromosome, complete genomephosphocarrier protein Chr3e-1063.9
NC_012659:4853640:487258348725834872831249Bacillus anthracis str. A0248, complete genomephosphocarrier protein Chr3e-1063.9
NC_014171:4933200:495337649533764953624249Bacillus thuringiensis BMB171 chromosome, complete genomephosphocarrier protein Chr3e-1063.9
NC_010814:2275199:231077023107702311036267Geobacter lovleyi SZ, complete genomePhosphotransferase system, phosphocarrier protein HPr6e-1062.8
NC_009513:1363987:138094213809421381208267Lactobacillus reuteri F275, complete genomePhosphotransferase system, phosphocarrier protein HPr1e-0961.6
NC_015697:321311:341107341107341373267Lactobacillus reuteri SD2112 chromosome, complete genomePTS family porter component HPr1e-0961.6
NC_010794:2071858:209212420921242092441318Methylacidiphilum infernorum V4, complete genomePhosphotransferase system HPr-related protein2e-0961.6
NC_008525:664500:664974664974665240267Pediococcus pentosaceus ATCC 25745, complete genomePhosphotransferase system, HPr-related protein2e-0961.2
NC_008497:1498430:151444615144461514712267Lactobacillus brevis ATCC 367, complete genomePhosphotransferase system, HPr-related protein2e-0961.2
NC_016641:2291363:230946623094662309732267Paenibacillus terrae HPL-003 chromosome, complete genomephosphocarrier protein HPr3e-0960.8
NC_016605:1177485:119919911991991199465267Pediococcus claussenii ATCC BAA-344 chromosome, complete genomephosphocarrier protein HPr5e-0959.7
NC_013716:2476334:249619324961932496450258Citrobacter rodentium ICC168, complete genomephosphocarrier protein HPr2e-0858.2
NC_019908:2312194:231795623179562318222267Brachyspira pilosicoli P43/6/78 chromosome, complete genomephosphocarrier protein HPr2e-0858.2
NC_018607:2231975:224589122458912246157267Brachyspira pilosicoli B2904 chromosome, complete genomephosphocarrier protein HPr2e-0858.2
NC_014330:888366:902163902163902429267Brachyspira pilosicoli 95/1000 chromosome, complete genomephosphocarrier protein HPr2e-0858.2
NC_018604:2350054:236394423639442364210267Brachyspira pilosicoli WesB complete genomephosphocarrier protein HPr2e-0858.2
NC_015978:996933:101769610176961017962267Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completephosphocarrier protein HPr2e-0857.8
NC_008344:554229:553970553970554239270Nitrosomonas eutropha C91, complete genomephosphocarrier, HPr family protein4e-0857
NC_007712:2897000:290911029091102909367258Sodalis glossinidius str. 'morsitans', complete genomePTS system phosphocarrier protein HPr4e-0857
NC_012856:207194:236274236274236543270Ralstonia pickettii 12D chromosome 1, complete genomePhosphotransferase system, phosphocarrier protein HPr3e-0857
NC_013172:783097:803477803477803749273Brachybacterium faecium DSM 4810, complete genomephosphotransferase system HPr (HPr) family protein3e-0857
NC_009708:1522281:154341515434151543672258Yersinia pseudotuberculosis IP 31758 chromosome, complete genomePTS system phosphohistidinoprotein-hexose phosphotransferase Hpr4e-0856.6
NC_012914:2360989:238234623823462382606261Paenibacillus sp. JDR-2, complete genomePhosphotransferase system, phosphocarrier protein HPr2e-0754.7
NC_011916:467106:4671064671064696642559Caulobacter crescentus NA1000 chromosome, complete genomephosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system, glucose-specific IIA subunit2e-0754.7
NC_012032:1827244:183104218310421831314273Chloroflexus sp. Y-400-fl, complete genomePhosphotransferase system, phosphocarrier protein HPr2e-0754.3
NC_010175:1825878:182966418296641829948285Chloroflexus aurantiacus J-10-fl, complete genomephosphocarrier, HPr family2e-0754.3
NC_010102:3919999:392764539276453927914270Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0753.9
NC_006905:3913988:391921839192183919487270Salmonella enterica subsp. enterica serovar Choleraesuis strputative phosphotransferase system, HPr-related protein7e-0752.8
NC_011083:3985618:399376039937603994029270Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phosphotransferase system HPr enzyme7e-0752.8
NC_004631:3841975:385446638544663854735270Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative phosphocarrier protein of PTS system7e-0752.8
NC_003197:3971905:397955139795513979820270Salmonella typhimurium LT2, complete genomeputative phosphotransferase system HPr protein7e-0752.8
NC_003198:3855157:386897638689763869245270Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system phosphocarrier protein7e-0752.8
NC_011094:3853036:386126238612623861531270Salmonella enterica subsp. enterica serovar Schwarzengrund strphosphotransferase system HPr enzyme7e-0752.8
NC_012125:3905782:391400839140083914277270Salmonella enterica subsp. enterica serovar Paratyphi C strainPTS system phosphocarrier protein7e-0752.8
NC_016810:3993863:400086440008644001133270Salmonella enterica subsp. enterica serovar Typhimurium strputative phosphocarrier protein of PTS system7e-0752.8
NC_016856:3985597:399324339932433993512270Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phosphotransferase system HPr protein7e-0752.8
NC_016857:3993864:400086540008654001134270Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative PTS system phosphocarrier protein7e-0752.8
NC_016860:3995445:400244740024474002716270Salmonella enterica subsp. enterica serovar Typhimurium strputative PTS system phosphocarrier protein7e-0752.8
NC_016863:3933848:394085039408503941119270Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phosphotransferase system HPr protein7e-0752.8
NC_017046:3991551:399969239996923999961270Salmonella enterica subsp. enterica serovar Typhimurium str. 798PTS system phosphocarrier protein7e-0752.8
NC_006511:3759550:376768337676833767952270Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system phosphocarrier protein9e-0752.4
NC_011149:3895921:390406339040633904332270Salmonella enterica subsp. enterica serovar Agona str. SL483,phosphotransferase system HPr enzyme9e-0752.4
NC_011080:3941909:395013539501353950404270Salmonella enterica subsp. enterica serovar Newport str. SL254,phosphotransferase system HPr enzyme9e-0752.4
NC_011147:3755725:376336237633623763631270Salmonella enterica subsp. enterica serovar Paratyphi A strPTS system phosphocarrier protein9e-0752.4
NC_009633:587562:594647594647594910264Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphotransferase system, phosphocarrier protein HPr1e-0651.6
NC_016513:317197:3400363400363415651530Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein3e-0650.8
NC_013416:875758:891618891618891875258Aggregatibacter actinomycetemcomitans D11S-1, complete genomephosphocarrier protein HPr4e-0650.1
NC_016513:1185241:120109912010991201356258Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completephosphocarrier protein HPr4e-0650.1
NC_003454:249304:264311264311264580270Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completePhosphocarrier protein HPr4e-0650.1
NC_015186:597695:604762604762605055294Acidiphilium multivorum AIU301, complete genomephosphocarrier protein HPr6e-0649.7
NC_009484:489398:495815495815496114300Acidiphilium cryptum JF-5 chromosome, complete genomephosphotransferase system, phosphocarrier protein HPr6e-0649.7
NC_004545:15650:693256932569582258Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomephosphocarrier protein HPr7e-0649.3
NC_009708:3035798:3038448303844830395811134Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein7e-0649.3