Pre_GI: BLASTP Hits

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Query: NC_009012:3224000:3225714 Clostridium thermocellum ATCC 27405, complete genome

Start: 3225714, End: 3226553, Length: 840

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:762000:778451778451779356906Clostridium clariflavum DSM 19732 chromosome, complete genomeputative vancomycin resistance protein5e-72271
NC_019978:686362:690820690820691674855Halobacteroides halobius DSM 5150, complete genomeputative vancomycin resistance protein2e-36152
NC_017195:2027430:202743020274302028341912Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completesporulation VanW like protein YoaR7e-33140
UCMB5137:1396603:140373814037381404646909Bacillus atrophaeus UCMB-5137putative factor for cell wall maintenance or synthesis2e-32139
NC_014639:1358597:137340013734001374308909Bacillus atrophaeus 1942 chromosome, complete genomefactor for cell wall maintenance or synthesis2e-32139
CP002207:1358597:137340013734001374308909Bacillus atrophaeus 1942, complete genomeputative factor for cell wall maintenance or synthesis2e-32139
NC_021171:4367834:438281243828124383717906Bacillus sp. 1NLA3E, complete genomeprotein YoaR3e-32139
NC_018870:1695588:1695588169558816970541467Thermacetogenium phaeum DSM 12270 chromosome, complete genomeVanW like protein1e-31136
NC_020291:5641444:5657348565734856588381491Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative vancomycin resistance protein1e-29130
NC_018515:989616:1005875100587510072391365Desulfosporosinus meridiei DSM 13257 chromosome, complete genomevancomycin resistance protein6e-29127
NC_014393:187454:1913251913251926951371Clostridium cellulovorans 743B chromosome, complete genomeVanW family protein1e-28126
NC_014652:1651671:1670788167078816721641377Caldicellulosiruptor hydrothermalis 108 chromosome, completevanw family protein2e-26119
NC_009253:829913:8304008304008317701371Desulfotomaculum reducens MI-1 chromosome, complete genomeVanW family protein3e-26119
NC_019978:178277:179029179029179832804Halobacteroides halobius DSM 5150, complete genomeputative vancomycin resistance protein3e-24112
NC_011773:3371989:337390733739073374818912Bacillus cereus AH820 chromosome, complete genomeputative lipoprotein2e-23109
NC_015387:155728:1545711545711557311161Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeVanW family protein1e-1893.6
NC_007644:711476:723881723881724798918Moorella thermoacetica ATCC 39073, complete genomeCopper amine oxidase-like3e-1892.8
NC_015565:2508345:250834525083452509277933Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeVanW family protein7e-1891.3
NC_015573:893862:9113439113439126831341Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeVanW family protein2e-1686.3
NC_010545:236000:2373862373862391161731Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein1e-1480.9
NC_015589:3813415:381984038198403820727888Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeVanW family protein1e-1480.5
NC_015434:6415555:6421853642185364236701818Verrucosispora maris AB-18-032 chromosome, complete genomeVanW family protein1e-1480.5
NC_010337:147664:176364176364177230867Heliobacterium modesticaldum Ice1, complete genomevanw domain protein, putative4e-1478.6
NC_008726:1175999:1192306119230611940541749Mycobacterium vanbaalenii PYR-1, complete genomeVanW family protein6e-1478.2
NC_012526:300126:3253373253373265151179Deinococcus deserti VCD115, complete genomeputative vancomycin resistance (VanW) protein, precursor9e-1374.3
NC_013757:3717500:3738787373878737410332247Geodermatophilus obscurus DSM 43160, complete genomeVanW family protein6e-1271.2
NC_009925:4271140:428774742877474288613867Acaryochloris marina MBIC11017, complete genomevancomycin B-type resistance protein VanW, putative4e-0858.9
NC_015589:3340500:335470733547073355549843Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeVanW family protein1e-0653.9