Pre_GI: BLASTP Hits

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Query: NC_009012:2661795:2673678 Clostridium thermocellum ATCC 27405, complete genome

Start: 2673678, End: 2673971, Length: 294

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020134:2772500:278321127832112783498288Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar biosynthesis anti-sigma factor FlgM8e-2095.9
NC_009922:2721343:273002327300232730316294Alkaliphilus oremlandii OhILAs, complete genomeanti-sigma-28 factor, FlgM2e-1271.2
NC_018664:239000:246865246865247155291Clostridium acidurici 9a chromosome, complete genomenegative regulator of flagellin synthesis, anti-sigma-28 factor FlgM5e-1166.2
NC_009633:760872:772827772827773120294Alkaliphilus metalliredigens QYMF chromosome, complete genomeanti-sigma-28 factor, FlgM family protein7e-0855.8
NC_014387:605711:611302611302611586285Butyrivibrio proteoclasticus B316 chromosome 1, complete genomenegative regulator of flagellin synthesis FlgM1e-0755.1
NC_002939:2337402:239511623951162395424309Geobacter sulfurreducens PCA, complete genomeflgM family protein2e-0651.2