Pre_GI: BLASTP Hits

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Query: NC_009012:1934107:1974489 Clostridium thermocellum ATCC 27405, complete genome

Start: 1974489, End: 1975286, Length: 798

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:4323370:436118343611834362004822Clostridium clariflavum DSM 19732 chromosome, complete genomeprophage antirepressor2e-134478
NC_012121:474144:477436477436478203768Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative antirepressor, phage associated1e-68259
NC_017208:694500:707763707763708560798Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein2e-66252
NC_021064:816000:817740817740818504765Propionibacterium avidum 44067, complete genomeBro family antirepressor6e-62237
NC_015164:3997743:401090140109014011752852Bacteroides salanitronis DSM 18170 chromosome, complete genomeprophage antirepressor1e-59229
NC_015913:1248000:125915312591531259932780Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeprophage antirepressor2e-58225
NC_017179:1683199:168852816885281689337810Clostridium difficile BI1, complete genomehypothetical protein4e-53208
NC_010320:1268355:127709412770941277885792Thermoanaerobacter sp. X514 chromosome, complete genomeprophage antirepressor7e-53207
NC_016077:1944000:194682219468221947619798Acidaminococcus intestini RyC-MR95 chromosome, complete genomeprophage antirepressor5e-52204
NC_015520:2974048:299950229995023000302801Mahella australiensis 50-1 BON chromosome, complete genomeprophage antirepressor5e-51201
NC_008525:1013979:102618110261811026984804Pediococcus pentosaceus ATCC 25745, complete genomeUncharacterized phage-encoded protein4e-50197
NC_012658:2525931:254229325422932543156864Clostridium botulinum Ba4 str. 657 chromosome, complete genomeanti-repressor2e-48192
NC_004557:1141558:114155811415581142370813Clostridium tetani E88, complete genomekilA protein, putative phage-related DNA binding protein2e-47189
NC_014219:830966:852587852587853432846Bacillus selenitireducens MLS10 chromosome, complete genomeprophage antirepressor4e-46184
NC_009782:920272:922882922882923661780Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein4e-45181
NC_002758:918827:921437921437922216780Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to anti-repressor4e-45181
NC_015975:752927:771303771303772091789Lactobacillus ruminis ATCC 27782 chromosome, complete genomeProphage antirepressor2e-39162
NC_007622:1842000:188313418831341883922789Staphylococcus aureus RF122, complete genomephage anti-repressor protein5e-39161
NC_002951:351029:358916358916359707792Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, antirepressor, putative6e-39160
NC_014554:1821320:183285618328561833608753Lactobacillus plantarum subsp. plantarum ST-III chromosome,hypothetical protein2e-38159
NC_007795:1922000:196176119617611962552792Staphylococcus aureus subsp. aureus NCTC 8325, complete genomebacteriophage L54a, antirepressor, putative3e-38158
NC_017351:643674:647068647068647856789Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage antirepressor KilAC domain protein4e-38158
NC_018704:176088:194458194458195210753Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein4e-37154
NC_014328:303063:355534355534356307774Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative prophage antirepressor1e-35150
NC_009487:921884:925081925081925848768Staphylococcus aureus subsp. aureus JH9 chromosome, completeprophage antirepressor4e-35148
NC_009632:921759:924956924956925723768Staphylococcus aureus subsp. aureus JH1 chromosome, completeBRO domain-containing protein4e-35148
NC_009706:1972000:198827419882741989077804Clostridium kluyveri DSM 555 chromosome, complete genomeprophage antirepressor6e-33141
NC_003212:2413824:243981624398162440586771Listeria innocua Clip11262, complete genomehypothetical protein2e-30132
NC_009706:2673906:273175627317562732508753Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-30131
NC_003909:386880:399794399794400546753Bacillus cereus ATCC 10987, complete genomephage antirepressor protein, putative5e-30131
NC_011898:3367457:340505534050553405807753Clostridium cellulolyticum H10, complete genomeAntA/AntB antirepressor domain protein5e-30131
NC_009495:2479465:251890425189042519704801Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeBRO family protein5e-27121
NC_003485:1061344:106346110634611064204744Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor8e-26117
NC_011001:2085986:209670520967052097502798Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein9e-26117
NC_014393:4323368:434092443409244341685762Clostridium cellulovorans 743B chromosome, complete genomeprophage antirepressor6e-25114
NC_003212:57061:810818108181854774Listeria innocua Clip11262, complete genomehypothetical protein9e-24110
NC_015164:3099097:312458831245883125337750Bacteroides salanitronis DSM 18170 chromosome, complete genomeprophage antirepressor1e-23110
NC_003485:579946:582257582257583018762Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor1e-22107
NC_009332:1269000:130504913050491305810762Streptococcus pyogenes str. Manfredo chromosome, complete genomephage antirepressor protein1e-22107
NC_009513:1184000:119712311971231197926804Lactobacillus reuteri F275, complete genomephage antirepressor protein1e-22107
NC_010609:880196:883218883218883991774Lactobacillus reuteri JCM 1112, complete genomephage antirepressor2e-22105
NC_009513:870837:873859873859874632774Lactobacillus reuteri F275, complete genomeprophage antirepressor2e-22105
NC_010577:1188438:121324012132401214028789Xylella fastidiosa M23, complete genomeprophage antirepressor2e-21103
NC_004556:1178897:120370012037001204488789Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-21103
NC_004116:560893:563950563950564699750Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa1, antirepressor, putative3e-21102
NC_003212:1713958:174305217430521743819768Listeria innocua Clip11262, complete genomehypothetical protein2e-2099.4
NC_003212:1248000:126543812654381266205768Listeria innocua Clip11262, complete genomehypothetical protein4e-2098.6
NC_010655:1606901:163592716359271636721795Akkermansia muciniphila ATCC BAA-835, complete genomeprophage antirepressor1e-1997.1
NC_014011:1139818:115821711582171158990774Aminobacterium colombiense DSM 12261 chromosome, complete genomeprophage antirepressor3e-1995.5
NC_014624:1369642:139149313914931392305813Eubacterium limosum KIST612 chromosome, complete genomeantirepressor9e-1994
NC_014774:1210004:125044412504441251238795Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor3e-1892.4
NC_015052:1030708:104657610465761047355780Bifidobacterium longum subsp. infantis 157F, complete genomephage antirepressor1e-1790.1
NC_015437:1494777:150309515030951503838744Selenomonas sputigena ATCC 35185 chromosome, complete genomeprophage antirepressor2e-1789.7
NC_012658:1810640:181229818122981813038741Clostridium botulinum Ba4 str. 657 chromosome, complete genomeantirepressor, phage associated2e-1789.4
NC_017219:1680344:168201016820101682789780Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative phage antirepressor2e-1789.4
NC_011593:1680215:168222016822201682999780Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phage antirepressor protein2e-1789.4
NC_014774:1210004:123948712394871240272786Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor3e-1789.4
NC_015913:117966:118931118931119551621Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomephage antirepressor8e-1787.4
NC_013315:1679000:167955516795551680328774Clostridium difficile CD196 chromosome, complete genomehypothetical protein1e-1687
NC_012985:1191125:228522853073789Candidatus Liberibacter asiaticus str. psy62, complete genomeprophage antirepressor1e-1687
NC_012985:1:228522853073789Candidatus Liberibacter asiaticus str. psy62, complete genomeprophage antirepressor1e-1687
NC_014624:551510:585506585506585979474Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-1686.3
NC_016799:167362:181688181688182506819Corynebacterium diphtheriae 31A chromosome, complete genomeputative anti-repressor protein4e-1685.5
NC_011035:541560:560415560415561260846Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein5e-1581.6
NC_017045:99500:115403115403116116714Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,anta/antb antirepressor domain protein7e-1581.3
NC_014738:2094000:211015421101542110867714Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,anta/antb antirepressor domain-containing protein7e-1581.3
NC_004369:868890:880230880230881018789Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-1480.5
NC_014774:171500:198615198615199403789Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor2e-1479.7
NC_017511:522679:538774538774539100327Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein2e-1479.7
NC_002946:1020175:104444710444471045292846Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein3e-1479.3
NC_015949:1719575:174530717453071746089783Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomephage antirepressor protein5e-1478.2
NC_014721:729942:739171739171739953783Caldicellulosiruptor kristjanssonii 177R1B chromosome, completephage antirepressor protein5e-1478.2
NC_004070:747146:753907753907754626720Streptococcus pyogenes MGAS315, complete genomeputative antirepressor - phage associated6e-1477.8
NC_003485:296140:298577298577299296720Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor6e-1477.8
NC_004606:1107500:114213011421301142849720Streptococcus pyogenes SSI-1, complete genomeputative antirepressor (phage associated)6e-1477.8
NC_017337:1107930:111257511125751113288714Staphylococcus aureus subsp. aureus ED133 chromosome, completeprophage, antirepressor, putative3e-1375.9
NC_002662:447236:451426451426452181756Lactococcus lactis subsp. lactis Il1403, complete genomeprophage pi1 protein 083e-1375.5
NC_016809:1778000:178241417824141783043630Haemophilus influenzae 10810, complete genomehypothetical protein5e-1375.1
NC_009012:2927793:293490029349002935646747Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein5e-1375.1
NC_014624:1840209:186105118610511861893843Eubacterium limosum KIST612 chromosome, complete genomeprophage antirepressor2e-1273.2
NC_014541:1231021:123858012385801239362783Ferrimonas balearica DSM 9799 chromosome, complete genomeprophage antirepressor2e-1169.7
NC_013173:953633:978862978862979515654Desulfomicrobium baculatum DSM 4028, complete genomeprophage antirepressor4e-1168.9
NC_014551:576000:578839578839579609771Bacillus amyloliquefaciens DSM 7, complete genomephage antirepressor [Staphylococcus prophage phiPV83]2e-1066.2
NC_014136:1879049:188225618822561882960705Leuconostoc kimchii IMSNU11154 chromosome, complete genomeputative antirepressor - phage associated4e-1065.5
NC_010645:1496816:1513524151352415146481125Bordetella avium 197N, complete genomephage protein7e-1064.3
NC_006087:2439252:245342124534212454203783Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprophage antirepressor protein8e-1064.3
NC_017986:5509569:552276155227615523573813Pseudomonas putida ND6 chromosome, complete genomeBRO domain protein2e-0963.2
NC_014664:1614568:163430316343031635073771Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeprophage antirepressor1e-0860.5
NC_014632:1112733:112580811258081126494687Ilyobacter polytropus DSM 2926 chromosome, complete genomephage regulatory protein, Rha family1e-0860.1
NC_014836:1551965:1564262156426215657971536Desulfurispirillum indicum S5 chromosome, complete genomeBRO domain-containing protein2e-0859.7
NC_009937:4122652:413458341345834135323741Azorhizobium caulinodans ORS 571, complete genomeputative prophage antirepressor2e-0756.2
NC_014836:1606587:1617241161724116188571617Desulfurispirillum indicum S5 chromosome, complete genomeBRO domain-containing protein2e-0756.2
NC_012522:4299287:432161943216194322419801Rhodococcus opacus B4, complete genomehypothetical protein2e-0756.2
NC_007434:1712000:174098017409801741699720Burkholderia pseudomallei 1710b chromosome I, complete sequenceBRO family, N-terminal domain protein4e-0755.5
NC_013174:2321000:232849123284912329225735Jonesia denitrificans DSM 20603, complete genomephage antirepressor protein4e-0755.5
NC_010645:406794:409618409618410367750Bordetella avium 197N, complete genomehypothetical protein4e-0755.5
NC_010645:1496816:150123515012351501984750Bordetella avium 197N, complete genomeantirepressor4e-0755.5
NC_007298:2689731:271017927101792710697519Dechloromonas aromatica RCB, complete genomeBRO, N-terminal5e-0755.1
NC_004129:4333302:434864343486434349527885Pseudomonas fluorescens Pf-5, complete genomeprobable phage protein1e-0653.9
NC_010163:614634:618914618914619660747Acholeplasma laidlawii PG-8A chromosome, complete genomephage proteinputative antirepressor3e-0652.8
NC_012559:1685812:169887816988781699522645Laribacter hongkongensis HLHK9, complete genomePhage associated-antirepressor3e-0652.4