Pre_GI: BLASTP Hits

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Query: NC_009012:1934107:1958009 Clostridium thermocellum ATCC 27405, complete genome

Start: 1958009, End: 1959793, Length: 1785

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:894955:9187449187449205251782Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-97357
NC_012559:854507:8793128793128805741263Laribacter hongkongensis HLHK9, complete genomehypothetical protein1e-69265
NC_012796:77071:8461484614863111698Desulfovibrio magneticus RS-1, complete genomehypothetical protein7e-62238
NC_015580:141379:1585361585361602931758Novosphingobium sp. PP1Y, complete genomehypothetical protein2e-56220
NC_017186:9120711:9132111913211191338411731Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein4e-55216
NC_014318:9120651:9132051913205191337811731Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein4e-55216
NC_011083:2542876:2552025255202525537461722Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-52206
NC_011830:3025437:3034193303419330361721980Desulfitobacterium hafniense DCB-2, complete genomehypothetical protein4e-52206
NC_012968:435532:4477454477454494751731Methylotenera mobilis JLW8, complete genomehypothetical protein1e-33144
NC_002927:2636694:2642893264289326448871995Bordetella bronchiseptica RB50, complete genomeabortive infection phage resistance protein3e-27123
NC_015321:4495394:4504349450434945060731725Fluviicola taffensis DSM 16823 chromosome, complete genomeabortive phage infection protein2e-24114
NC_015277:325207:3270783270783287841707Sphingobacterium sp. 21 chromosome, complete genomeAbortive phage infection protein6e-24112
NC_007954:1823085:183037318303731831347975Shewanella denitrificans OS217, complete genomehypothetical protein3e-22107
NC_007907:1940000:194973419497341950690957Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-22107
NC_009483:3173464:3180152318015231818311680Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein8e-22105
NC_014002:1946664:1954801195480119565281728Methanohalophilus mahii DSM 5219 chromosome, complete genomeAbortive phage infection3e-20100
NC_007954:1823085:183242718324271833167741Shewanella denitrificans OS217, complete genomehypothetical protein7e-2099.4
NC_007907:1940000:1947058194705819480951038Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-1893.2
NC_009464:650997:6595186595186613411824Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein5e-1376.6
NC_020908:1889759:1901494190149419032991806Octadecabacter arcticus 238, complete genomehypothetical protein6e-1272.8
NC_015138:5046921:5061614506161450633951782Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeabortive phage infection protein1e-1172.4
NC_008686:2080770:2092962209296220947641803Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein4e-1170.5
NC_013061:1052957:1092202109220210942202019Pedobacter heparinus DSM 2366, complete genomehypothetical protein4e-1170.1
NC_010556:2328303:2337655233765523394421788Exiguobacterium sibiricum 255-15, complete genomehypothetical protein5e-1170.1
NC_011989:2262881:2284711228471122868102100Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein9e-1168.9
NC_007969:2885249:2912247291224729143672121Psychrobacter cryohalolentis K5, complete genomehypothetical protein1e-1068.9
NC_008095:4189082:4203223420322342052952073Myxococcus xanthus DK 1622, complete genomehypothetical protein2e-1068.2
NC_009138:1843998:1853676185367618554871812Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-1068.2
NC_015510:3273308:3280350328035032826952346Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeabortive phage infection protein2e-1067.8
NC_015733:1976752:1987917198791719895781662Pseudomonas putida S16 chromosome, complete genomehypothetical protein5e-1066.6
NC_008700:312099:3270463270463288541809Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein8e-1065.9
NC_016109:3963189:3975770397577039777792010Kitasatospora setae KM-6054, complete genomehypothetical protein9e-1065.9
NC_014844:903877:9145849145849162841701Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAbortive phage infection1e-0965.5
NC_014507:2174500:2186235218623521883552121Methanoplanus petrolearius DSM 11571 chromosome, complete genomeabortive phage infection2e-0964.3
NC_014008:3296708:3303789330378933056871899Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeAbortive phage infection3e-0860.8
NC_013757:780835:7944477944477965012055Geodermatophilus obscurus DSM 43160, complete genomeAbortive phage infection3e-0860.8
NC_015846:24771:2809528095302122118Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein6e-0859.7
NC_009848:720510:7331147331147348831770Bacillus pumilus SAFR-032, complete genomehypothetical protein8e-0859.3
NC_015152:1602412:1610976161097616131232148Spirochaeta sp. Buddy chromosome, complete genomeAbortive phage infection protein2e-0757.8
NC_016111:3052494:3069222306922230712312010Streptomyces cattleya NRRL 8057, complete genomeAIPR protein2e-0757.8
NC_012968:2000218:2018945201894520209812037Methylotenera mobilis JLW8, complete genomehypothetical protein3e-0757.4
NC_009380:636000:6425536425536445381986Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein4e-0757
NC_015953:2349503:2368128236812823702782151Streptomyces sp. SirexAA-E chromosome, complete genomeabortive phage infection5e-0756.6
NC_014644:1532500:1532741153274115344471707Gardnerella vaginalis ATCC 14019 chromosome, complete genomehypothetical protein5e-0756.6
NC_016582:7033000:7046258704625870482672010Streptomyces bingchenggensis BCW-1 chromosome, complete genomeabortive phage infection protein6e-0756.2
NC_011566:4709672:4722323472232347241761854Shewanella piezotolerans WP3, complete genomehypothetical protein6e-0756.2
NC_015497:4683741:4692145469214546942622118Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeAbortive phage infection8e-0755.8
NC_017190:3812065:3825056382505638268671812Bacillus amyloliquefaciens LL3 chromosome, complete genomeAIPR protein1e-0655.5
NC_014551:3797047:3810034381003438118451812Bacillus amyloliquefaciens DSM 7, complete genomeAIPR protein1e-0655.5
NC_019842:3755275:3790482379048237922931812Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,AIPR protein4e-0653.5
NC_009464:931647:9412789412789429181641Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein5e-0653.1
NC_018524:4235773:4252038425203842541942157Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeAIPR family protein7e-0652.8