Pre_GI: BLASTP Hits

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Query: NC_009012:1901492:1919023 Clostridium thermocellum ATCC 27405, complete genome

Start: 1919023, End: 1920129, Length: 1107

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012225:1015452:1023891102389110249101020Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitC2e-71269
NC_012225:1015452:1022782102278210238101029Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitB1e-68260
NC_012225:1015452:102177610217761022747972Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitA1e-67256
NC_012225:1015452:102063010206301021604975Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitB3e-64245
NC_014364:1990000:2000764200076420018251062Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-31137
NC_014364:1990000:199138319913831992369987Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysR substrate-binding protein3e-28126
NC_013446:4723380:4749627474962747506761050Comamonas testosteroni CNB-2, complete genomeperiplasmic iron binding protein4e-24112
NC_015680:930483:9469259469259479681044Pyrococcus yayanosii CH1 chromosome, complete genomethiamine-binding periplasmic protein3e-23109
NC_015572:4576778:458515145851514586149999Methylomonas methanica MC09 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-22107
NC_019940:1932906:195125019512501952245996Thioflavicoccus mobilis 8321 chromosome, complete genomeFe3+ ABC transporter substrate-binding protein2e-22106
NC_014122:967194:9842959842959853201026Methanocaldococcus infernus ME chromosome, complete genomeextracellular solute-binding protein family 16e-22105
NC_012563:1348500:1363689136368913647351047Clostridium botulinum A2 str. Kyoto, complete genomeABC transporter, substrate-binding protein2e-20100
NC_017179:3222015:3226058322605832271071050Clostridium difficile BI1, complete genomeABC transporter substrate-binding protein3e-2099.8
NC_013315:3214063:3218106321810632192271122Clostridium difficile CD196 chromosome, complete genomeABC transporter substrate-binding protein3e-2099.8
NC_014306:2476316:2497276249727624983041029Erwinia billingiae Eb661, complete genomeABC transporter, periplasmic substrate-binding protein7e-2098.6
NC_012962:869295:8692958692958703261032Photorhabdus asymbiotica, complete genomeperiplasmic ferric iron-binding protein (putative periplasmic-iron binding protein)2e-1996.7
NC_011000:1216430:1220139122013912211671029Burkholderia cenocepacia J2315 chromosome 1, complete sequenceextracellular solute-binding protein3e-1996.3
NC_014153:2187409:219158521915852192571987Thiomonas intermedia K12 chromosome, complete genomeextracellular solute-binding protein family 14e-1995.9
NC_014166:2149984:2168859216885921698811023Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1791.3
NC_010067:892729:902946902946903923978Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-1891.3
NC_012880:3748665:378308237830823784059978Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 18e-1788.2
NC_006177:2943259:2964845296484529659421098Symbiobacterium thermophilum IAM 14863, complete genomeiron ABC transporter substrate-binding protein5e-1685.9
NC_013946:415028:4411734411734422551083Meiothermus ruber DSM 1279 chromosome, complete genomeABC transporter periplasmic binding protein, thiB subfamily7e-1685.1
NC_015381:1318818:1321712132171213227671056Burkholderia gladioli BSR3 chromosome 1, complete sequenceextracellular solute-binding protein2e-1584
NC_006510:2044347:2055331205533120564371107Geobacillus kaustophilus HTA426, complete genomeABC transporter (substrate-binding protein)2e-1583.6
NC_009380:2253500:2276570227657022776071038Salinispora tropica CNB-440 chromosome, complete genomeextracellular solute-binding protein3e-1583.2
NC_017297:1280963:129455712945571295387831Clostridium botulinum F str. 230613 chromosome, complete genomeABC transporter substrate-binding protein1e-1481.3
NC_001263:243000:2635362635362645671032Deinococcus radiodurans R1 chromosome 1, complete sequenceABC transporter, periplasmic substrate-binding protein, solute-binding family 17e-1478.6
NC_010674:370629:3923483923483933851038Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, substrate-binding protein1e-1377.8
NC_010723:371741:3877433877433887921050Clostridium botulinum E3 str. Alaska E43, complete genomeABC transporter, substrate-binding protein5e-1375.5
NC_016771:4962795:4971207497120749722411035Bacillus cereus NC7401, complete genomelipoprotein1e-1274.7
NC_011658:5007691:5018884501888450199181035Bacillus cereus AH187 chromosome, complete genomeputative lipoprotein1e-1274.7
NC_015376:965000:9682399682399692551017Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding family protein 151e-1274.7
NC_009718:1771500:178332717833271784127801Fervidobacterium nodosum Rt17-B1, complete genomeiron ABC transporter substrate-binding protein1e-1274.3
NC_020210:3341976:3355714335571433568021089Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter substrate-binding protein2e-1273.9
NC_018681:6977670:6992751699275169938241074Nocardia brasiliensis ATCC 700358 chromosome, complete genome2-aminoethylphosphonate ABC transporter substrate-binding protein3e-1273.2
NC_011313:871445:8886868886868897411056Aliivibrio salmonicida LFI1238 chromosome 2, complete sequenceextracellular solute-binding protein3e-1272.8
NC_003888:6103534:6144349614434961454701122Streptomyces coelicolor A3(2), complete genomesolute binding lipoprotein5e-1272.4
NC_016779:4969626:4976725497672549777591035Bacillus cereus F837/76 chromosome, complete genomeABC transporter substrate-binding protein6e-1272
NC_006177:1254635:1276505127650512775751071Symbiobacterium thermophilum IAM 14863, complete genomeABC transporter substrate-binding protein8e-1271.6
NC_003909:4951444:4962650496265049636841035Bacillus cereus ATCC 10987, complete genomelipoprotein, putative1e-1171.2
NC_009328:3322802:3336523333652333376141092Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein1e-1170.9
NC_010582:1771591:1791207179120717922741068Streptococcus pneumoniae CGSP14, complete genomeABC transporter, substrate-binding protein2e-1170.5
NC_013716:1298932:1302979130297913040251047Citrobacter rodentium ICC168, complete genomespermidine/putrescine ABC transporter, substrate-binding protein2e-1170.1
NC_016751:1776669:179397517939751794946972Marinitoga piezophila KA3 chromosome, complete genomeABC transporter substrate-binding protein3e-1170.1
NC_002505:1507860:1523041152304115241411101Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein3e-1169.7
NC_012578:1465302:1480483148048314815831101Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein3e-1169.7
NC_012668:2115228:2119984211998421210301047Vibrio cholerae MJ-1236 chromosome 1, complete sequenceABC transporter periplasmic spermidine putrescine-binding protein PotD3e-1169.7
NC_016445:984856:1000036100003610010671032Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein3e-1169.7
NC_016944:1504888:1520069152006915211001032Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine transport system substrate-binding protein3e-1169.7
NC_010498:1995500:2023681202368120247271047Escherichia coli SMS-3-5, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein4e-1169.3
NC_009457:1068000:1081457108145710825571101Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein5e-1168.9
NC_015581:1891409:1911321191132119123551035Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeextracellular solute-binding protein family 15e-1168.9
NC_011969:4945441:4953853495385349548871035Bacillus cereus Q1 chromosome, complete genomelipoprotein2e-1066.6
NC_013172:542896:5511245511245522031080Brachybacterium faecium DSM 4810, complete genomeABC-type Fe3+ transport system, periplasmic component3e-1066.2
NC_012472:5015621:5022733502273350237671035Bacillus cereus 03BB102, complete genomeputative lipoprotein3e-1066.2
NC_008600:5005345:5012457501245750134911035Bacillus thuringiensis str. Al Hakam, complete genomeABC transporter, substrate-binding protein3e-1066.2
NC_013946:2050871:205396320539632054949987Meiothermus ruber DSM 1279 chromosome, complete genomeextracellular solute-binding protein family 11e-0964.7
NC_014206:2941575:2955729295572929568021074Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0964.7
NC_016935:4326644:4347412434741243485181107Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0964.3
NC_008314:477722:5138795138795149041026Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: POPT family1e-0964.3
NC_015690:4592582:4607271460727146083771107Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0964.3
NC_014166:2649444:2664773266477326657801008Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-0963.2
NC_011725:5169135:5180391518039151814251035Bacillus cereus B4264 chromosome, complete genomelipoprotein3e-0963.2
NC_012032:398419:4152274152274163571131Chloroflexus sp. Y-400-fl, complete genomeextracellular solute-binding protein family 14e-0962.8
NC_010175:398453:4152614152614163911131Chloroflexus aurantiacus J-10-fl, complete genomeextracellular solute-binding protein family 14e-0962.8
NC_014171:5068500:5076053507605350770871035Bacillus thuringiensis BMB171 chromosome, complete genomeABC transporter substrate-binding protein6e-0962
NC_008312:4358134:4377026437702643780901065Trichodesmium erythraeum IMS101, complete genomeextracellular solute-binding protein, family 17e-0962
NC_016593:762216:7679087679087689811074Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completespermidine/putrescine-binding periplasmic protein9e-0961.6
NC_009481:1638394:1658213165821316592561044Synechococcus sp. WH 7803 chromosome, complete genomeFe3+ ABC transporter periplasmic protein1e-0861.2
NC_007516:1439537:1448661144866114496651005Synechococcus sp. CC9605, complete genomeputative iron ABC transporter, substrate binding protein1e-0860.8
NC_014718:791528:8012338012338023361104Burkholderia rhizoxinica HKI 454 chromosome, complete genomeABC transporter substrate-binding protein2e-0860.5
NC_012108:2542328:2561377256137725625101134Desulfobacterium autotrophicum HRM2, complete genomeTbpA2e-0860.5
NC_002505:1507860:1521892152189215229291038Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein2e-0860.1
NC_009457:1068000:1080309108030910813461038Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein2e-0860.1
NC_012578:1465302:1479334147933414803711038Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein2e-0860.1
NC_012668:2115228:2121142212114221221791038Vibrio cholerae MJ-1236 chromosome 1, complete sequenceputrescine ABC transporter putrescine-binding protein PotF2e-0860.1
NC_016445:984856:9988879988879999241038Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine transport system substrate-binding protein2e-0860.1
NC_016944:1504888:1518920151892015199571038Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein2e-0860.1
NC_006510:746814:7525867525867536591074Geobacillus kaustophilus HTA426, complete genomespermidine/putrescine ABC transporter (substrate-binding protein)4e-0859.7
NC_014910:1591003:1605339160533916063881050Alicycliphilus denitrificans BC chromosome, complete genomeextracellular solute-binding protein family 15e-0858.9
NC_015422:3413386:3418761341876134198101050Alicycliphilus denitrificans K601 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0858.9
NC_012914:469117:4691174691174701871071Paenibacillus sp. JDR-2, complete genomeextracellular solute-binding protein family 11e-0758.2
NC_007604:1442500:1460847146084714618691023Synechococcus elongatus PCC 7942, complete genomeiron transport system substrate-binding protein1e-0757.8
NC_008309:1155218:1155218115521811562551038Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein2e-0757
NC_007513:1900000:190792319079231908921999Synechococcus sp. CC9902, complete genomeputative iron ABC transporter, substrate binding protein3e-0756.2
NC_014654:2277461:2283154228315422841671014Halanaerobium sp. 'sapolanicus' chromosome, complete genomeextracellular solute-binding protein family 14e-0756.2
NC_009053:393700:4134014134014144831083Actinobacillus pleuropneumoniae L20, complete genomespermidine/putrescine-binding periplasmic protein 1 precursor5e-0755.8
NC_010278:398521:4181284181284192101083Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,spermidine/putrescine-binding periplasmic protein5e-0755.8
NC_019897:73957:1160571160571171901134Thermobacillus composti KWC4 chromosome, complete genomeFe3+ ABC transporter substrate-binding protein5e-0755.8
NC_008262:67711:8062880628816921065Clostridium perfringens SM101, complete genomeBacterial extracellular solute-binding protein domain protein5e-0755.8
NC_018080:1730534:1753415175341517544731059Pseudomonas aeruginosa DK2 chromosome, complete genomeABC transporter substrate-binding protein6e-0755.5
NC_010939:405477:4411834411834422651083Actinobacillus pleuropneumoniae serovar 7 str. AP76, completespermidine/putrescine-binding periplasmic protein 1 precursor7e-0755.1
NC_020134:1328302:1342631134263113436891059Clostridium stercorarium subsp. stercorarium DSM 8532, completespermidine/putrescine transport system substarte-binding protein PotD1e-0654.7
NC_013204:2371499:237930823793082380303996Eggerthella lenta DSM 2243, complete genomeABC-type transporter, periplasmic component2e-0653.5
NC_010511:6756000:6756055675605567571191065Methylobacterium sp. 4-46 chromosome, complete genomeextracellular solute-binding protein2e-0653.5
NC_008726:6393489:6427326642732664283691044Mycobacterium vanbaalenii PYR-1, complete genomeextracellular solute-binding protein, family 15e-0652.4
NC_008209:253663:2723772723772734831107Roseobacter denitrificans OCh 114, complete genomespermidine/putrescine-binding periplasmic protein, putative7e-0652
NC_007948:4558000:4592642459264245937211080Polaromonas sp. JS666, complete genomeputative ABC transport system, substrate-binding exported protein7e-0652
NC_008820:1766973:1801124180112418021521029Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein7e-0652
NC_009921:6421387:6437373643737364384491077Frankia sp. EAN1pec, complete genomeextracellular solute-binding protein family 18e-0652
NC_005071:288922:3258733258733269011029Prochlorococcus marinus str. MIT 9313, complete genomeputative iron ABC transporter, substrate binding protein9e-0651.6