Pre_GI: BLASTN Hits

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Query: NC_008800:2298000 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Start: 2298000, End: 2321043, Length: 23044

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
CP002516:2580774*2580774260629825525Escherichia coli KO11, complete genome2e-81311BLASTN svgBLASTP svg
CP002185:1493280*1493280151559922320Escherichia coli W, complete genome2e-81311BLASTN svgBLASTP svg
NC_012917:26410002641000266615925160Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-79305BLASTN svgBLASTP svg
AC_000091:1407693*1407693143069823006Escherichia coli W3110 DNA, complete genome1e-76295BLASTN svgBLASTP svg
NC_000913:1404000*1404000142700823009Escherichia coli K12, complete genome1e-76295BLASTN svgBLASTP svg
NC_010473:1493983*1493983151640422422Escherichia coli str. K-12 substr. DH10B, complete genome1e-76295BLASTN svgBLASTP svg
NC_013716:1756545*1756545177694320399Citrobacter rodentium ICC168, complete genome4e-73283BLASTN svgBLASTP svg
NC_020063:2449554*2449554247289823345Enterobacteriaceae bacterium strain FGI 57, complete genome2e-71278BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-66262BLASTN svgBLASTP svg
NC_008563:15054051505405154006134657Escherichia coli APEC O1, complete genome2e-65258BLASTN svgBLASTP svg
NC_009648:1541699*1541699160010958411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-65258BLASTN svgBLASTP svg
NC_014121:1848971*1848971187217723207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete6e-63250BLASTN svgBLASTP svg
NC_004547:91355391355395334239790Erwinia carotovora subsp. atroseptica SCRI1043, complete genome8e-56226BLASTN svgBLASTP svg
NC_009792:13455001345500136809322594Citrobacter koseri ATCC BAA-895, complete genome3e-40174BLASTN svgBLASTP svg
NC_020063:24809832480983250703626054Enterobacteriaceae bacterium strain FGI 57, complete genome4e-39170BLASTN svgBLASTP svg
NC_013508:18628961862896188607023175Edwardsiella tarda EIB202, complete genome2e-19105BLASTN svgBLASTP svg
NC_021066:17780001778000179688518886Raoultella ornithinolytica B6, complete genome8e-19103BLASTN svgBLASTP svg
NC_021066:1712905*1712905175859645692Raoultella ornithinolytica B6, complete genome8e-19103BLASTN svgBLASTP svg
NC_015663:44479844447984447024622263Enterobacter aerogenes KCTC 2190 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_003198:13368941336894136036523472Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-1383.8BLASTN svgBLASTP svg
NC_004631:16235111623511164614622636Salmonella enterica subsp. enterica serovar Typhi Ty2, complete7e-1383.8BLASTN svgBLASTP svg
NC_007951:4608560*4608560463659128032Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_003197:17536631753663177609922437Salmonella typhimurium LT2, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006511:12731621273162129663123470Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-1177.8BLASTN svgBLASTP svg
NC_006905:17660001766000178860222603Salmonella enterica subsp. enterica serovar Choleraesuis str5e-1177.8BLASTN svgBLASTP svg
NC_008258:18738051873805189655222748Shigella flexneri 5 str. 8401, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011080:17500001750000177244622447Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-1177.8BLASTN svgBLASTP svg
NC_003143:2433190*2433190245920626017Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:22272782227278224825620979Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005810:2180303*2180303220909928797Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006155:2461262*2461262248869127430Yersinia pseudotuberculosis IP 32953, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008149:1842500*1842500188064438145Yersinia pestis Nepal516, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008150:1705152*1705152174460539454Yersinia pestis Antiqua, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:22523802252380227191719538Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010465:22828742282874230925826385Yersinia pseudotuberculosis YPIII, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010634:2376245*2376245240318526941Yersinia pseudotuberculosis PB1/+, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str7e-0763.9BLASTN svgBLASTP svg
NC_009092:2282437*2282437232744145005Shewanella loihica PV-4, complete genome3e-0661.9BLASTN svgBLASTP svg