Some Help

Query: NC_008800:1942000 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Start: 1942000, End: 1965973, Length: 23974

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008149:2652825*2652825267618023356Yersinia pestis Nepal516, complete genome01354BLASTN svgBLASTP svg
NC_003143:1973867*1973867199917525309Yersinia pestis CO92, complete genome01354BLASTN svgBLASTP svg
NC_010159:1710268*1710268173543325166Yersinia pestis Angola, complete genome01346BLASTN svgBLASTP svg
NC_020064:27798642779864280221322350Serratia marcescens FGI94, complete genome0726BLASTN svgBLASTP svg
NC_015061:3147691*3147691317026522575Rahnella sp. Y9602 chromosome, complete genome0704BLASTN svgBLASTP svg
NC_012880:2399205*2399205242050221298Dickeya dadantii Ech703, complete genome4e-79303BLASTN svgBLASTP svg
NC_010159:29555622955562297845722896Yersinia pestis Angola, complete genome3e-49204BLASTN svgBLASTP svg
NC_005810:19760001976000199860722608Yersinia pestis biovar Microtus str. 91001, complete genome3e-49204BLASTN svgBLASTP svg
NC_003143:18800001880000190232522326Yersinia pestis CO92, complete genome3e-49204BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-22115BLASTN svgBLASTP svg
NC_013421:2306000*2306000232812222123Pectobacterium wasabiae WPP163, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012751:1190206*1190206121514924944Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete3e-1281.8BLASTN svgBLASTP svg
NC_021066:32015003201500323157930080Raoultella ornithinolytica B6, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013282:18424121842412187000127590Cronobacter turicensis, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010556:691498*69149871146719970Exiguobacterium sibiricum 255-15, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_020064:1150982*1150982117040619425Serratia marcescens FGI94, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006905:65173265173267724625515Salmonella enterica subsp. enterica serovar Choleraesuis str2e-0765.9BLASTN svgBLASTP svg
CP002797:1960000*1960000198508025081Escherichia coli NA114, complete genome7e-0763.9BLASTN svgBLASTP svg