Pre_GI: BLASTP Hits

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Query: NC_008781:2925818:2929717 Polaromonas naphthalenivorans CJ2, complete genome

Start: 2929717, End: 2930451, Length: 735

Host Lineage: Polaromonas naphthalenivorans; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Naphthalene-degrading bacterium. Polaromonas naphthalenivorans was isolated from naphthalene-contaminated, freshwater sediment. This organism is capable of aerobic degradation of naphthalene at temperatures of less than 20 degrees C. Naphthalene is a polycyclic aromatic hydrocarbon (PAH). PAHs can be toxic and/or carcinogenic, therefore PAH contamination is of considerable concern.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014311:2781898:280402628040262804784759Ralstonia solanacearum PSI07 chromosome, complete genome16S rRNA pseudouridylate 516 synthase9e-53206
NC_012724:3222415:323714632371463237865720Burkholderia glumae BGR1 chromosome 1, complete genomePseudouridine synthase, Rsu6e-51200
NC_015381:3607626:362549336254933626209717Burkholderia gladioli BSR3 chromosome 1, complete sequencePseudouridine synthase, Rsu1e-44179
NC_015424:2917817:293437029343702935062693Aeromonas veronii B565 chromosome, complete genomePseudouridine synthase6e-26117
NC_020064:3157656:315765631576563158372717Serratia marcescens FGI94, complete genomepseudouridine synthase family protein1e-25116
NC_010278:398521:402012402012402704693Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,ribosomal small subunit pseudouridine synthase A3e-24112
NC_010939:405477:406801406801407493693Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeribosomal small subunit pseudouridine synthase A3e-24112
NC_009053:393700:397182397182397874693Actinobacillus pleuropneumoniae L20, complete genomeribosomal small subunit pseudouridine synthase A4e-24111
NC_016816:1545354:157875515787551579474720Pantoea ananatis LMG 5342, complete genome16S rRNA pseudouridylate synthase A4e-23108
NC_010067:660659:682165682165682860696Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-22106
NC_010102:683444:721413721413722108696Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-22106
NC_013971:2408522:240852224085222409226705Erwinia amylovora ATCC 49946 chromosome, complete genomeribosomal small subunit pseudouridine synthase A2e-22105
NC_013961:2370994:237099423709942371698705Erwinia amylovora, complete genomeputative 16S pseudouridylate 516 synthase2e-22105
NC_016941:1774000:177451717745171775212696Staphylococcus aureus subsp. aureus MSHR1132, complete genomeRNA pseudouridine synthase1e-21103
NC_014618:1593360:161091016109101611617708Enterobacter cloacae SCF1 chromosome, complete genomepseudouridine synthase1e-21103
NC_006511:682863:706724706724707419696Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCribosomal small subunit pseudouridine synthase1e-21103
NC_011147:682897:706670706670707365696Salmonella enterica subsp. enterica serovar Paratyphi A str16S rRNA pseudouridylate synthase A1e-21103
NC_016745:546249:560331560331561017687Oceanimonas sp. GK1 chromosome, complete genomepseudouridine synthase8e-22103
NC_012917:1840172:188727818872781887973696Pectobacterium carotovorum subsp. carotovorum PC1, complete genomepseudouridine synthase2e-21102
NC_017351:1869287:187134018713401872035696Staphylococcus aureus subsp. aureus 11819-97 chromosome, completepseudouridine synthase family protein3e-21102
NC_002745:1804000:180481518048151805510696Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein4e-21101
NC_002951:1848684:185145218514521852147696Staphylococcus aureus subsp. aureus COL, complete genomepseudouridine synthase, family 14e-21101
NC_009782:1881722:188412818841281884823696Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein4e-21101
NC_007795:1774725:177743717774371778132696Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeribosomal small subunit pseudouridine synthase A, putative4e-21101
NC_002758:1880323:188272918827291883424696Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to 16S psudouridylate synthase4e-21101
NC_007793:1871165:187376318737631874458696Staphylococcus aureus subsp. aureus USA300, complete genomepseudouridine synthase, family 14e-21101
NC_010079:1871915:187451318745131875208696Staphylococcus aureus subsp. aureus USA300_TCH1516, completepseudouridylate synthase4e-21101
NC_009487:1925645:192793719279371928632696Staphylococcus aureus subsp. aureus JH9 chromosome, completepseudouridine synthase4e-21101
NC_009632:1927372:192781119278111928506696Staphylococcus aureus subsp. aureus JH1 chromosome, completepseudouridine synthase4e-21101
NC_017347:1852500:185368718536871854382696Staphylococcus aureus subsp. aureus T0131 chromosome, completePseudouridine synthase4e-21101
NC_017343:1748620:175102617510261751721696Staphylococcus aureus subsp. aureus ECT-R 2, complete genomehypothetical protein4e-21101
NC_017341:1851972:185453318545331855228696Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ribosomal small subunit pseudouridine synthase A4e-21101
NC_016912:1732354:173506617350661735761696Staphylococcus aureus subsp. aureus VC40 chromosome, completepseudouridine synthase family 1 protein4e-21101
NC_013450:1825010:182741618274161828111696Staphylococcus aureus subsp. aureus ED98, complete genomepseudouridine synthase family 1 protein4e-21101
NC_009641:1833000:183429318342931834988696Staphylococcus aureus subsp. aureus str. Newman chromosome,ribosomal small subunit pseudouridine synthase A4e-21101
NC_017342:1462297:147786514778651478560696Staphylococcus aureus subsp. aureus TCH60 chromosome, completeribosomal small subunit pseudouridine synthase A8e-21100
NC_002952:1917999:192005319200531920748696Staphylococcus aureus subsp. aureus MRSA252, complete genomeRNA pseudouridine synthase8e-21100
NC_017338:1830790:183122918312291831924696Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeribosomal small subunit pseudouridine synthase A1e-20100
NC_002953:1819411:182195218219521822647696Staphylococcus aureus subsp. aureus MSSA476, complete genomeRNA pseudouridine synthase1e-20100
NC_003923:1841500:184261618426161843311696Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein1e-20100
NC_017337:1829840:183217718321771832872696Staphylococcus aureus subsp. aureus ED133 chromosome, completepseudouridine synthase, family 12e-2099.4
NC_007168:1167454:119082511908251191517693Staphylococcus haemolyticus JCSC1435, complete genome16S rRNA uridine-516 pseudouridylate synthase and related Pseudouridylate synthase2e-2099.4
NC_016928:1843597:184612218461221846817696Staphylococcus aureus subsp. aureus M013 chromosome, completeribosomal small subunit pseudouridine synthase A3e-2099
NC_007622:1751500:175231117523111753006696Staphylococcus aureus RF122, complete genome16S RNA pseudouridylate synthase4e-2098.6
NC_014410:51711:716907169072415726Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,RNA-binding S4 domain protein4e-2098.2
NC_019970:35985:575805758058305726Thermoanaerobacterium thermosaccharolyticum M0795, complete genomepseudouridine synthase family protein1e-1997.1
NC_009089:478328:478328478328479050723Clostridium difficile 630, complete genomeputative RNA pseudouridine synthase3e-1995.5
NC_015387:2042042:204470920447092045440732Marinithermus hydrothermalis DSM 14884 chromosome, complete genomepseudouridine synthase Rsu5e-1994.7
NC_002976:1361364:136136413613641362056693Staphylococcus epidermidis RP62A, complete genomepseudouridine synthase, family 16e-1994.4
NC_004461:1465397:146539714653971466089693Staphylococcus epidermidis ATCC 12228, complete genome16S pseudouridylate synthase6e-1994.4
NC_008262:2433979:246534424653442466063720Clostridium perfringens SM101, complete genome16S pseudouridylate synthase5e-1891.7
NC_010320:1805818:181440418144041815126723Thermoanaerobacter sp. X514 chromosome, complete genomepseudouridine synthase7e-1787.4
NC_014538:33718:501145011450836723Thermoanaerobacter sp. X513 chromosome, complete genomepseudouridine synthase7e-1787.4
NC_010321:2256758:226000722600072260732726Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completepseudouridine synthase1e-1686.7
NC_015958:57957:718017180172526726Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomepseudouridine synthase Rsu1e-1686.7
NC_014964:2237979:224715022471502247875726Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completepseudouridine synthase1e-1686.7
NC_015555:49842:707637076371485723Thermoanaerobacterium xylanolyticum LX-11 chromosome, completepseudouridine synthase Rsu2e-1686.3
NC_014209:81643:110590110590111312723Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,RNA-binding S4 domain protein3e-1582.4
NC_013921:36000:523525235253074723Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-binding S4 domain protein3e-1582.4
NC_011761:1904637:192817119281711928926756Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeribosomal small subunit pseudouridine synthase A7e-1477.8
NC_010376:1433247:144803314480331448740708Finegoldia magna ATCC 29328, complete genome16S pseudouridylate synthase7e-1477.8
NC_008536:5192235:520074552007455201539795Solibacter usitatus Ellin6076, complete genomepseudouridine synthase3e-1375.9
NC_017179:446564:464782464782465300519Clostridium difficile BI1, complete genomepseudouridine synthase4e-1375.1
NC_005773:4539751:454591645459164546608693Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRibosomal small subunit pseudouridine synthase A3e-1272.4
NC_004193:2342528:234404723440472344760714Oceanobacillus iheyensis HTE831, complete genome16S pseudouridine synthase5e-1271.6
NC_002516:776787:801275801275801967693Pseudomonas aeruginosa PAO1, complete genomeprobable pseudouridylate synthase2e-1066.2
NC_015379:1600715:161634916163491617041693Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,ribosomal small subunit pseudouridine synthase A6e-1064.7
NC_007929:473500:494432494432495154723Lactobacillus salivarius subsp. salivarius UCC118, complete genomeRibosomal small subunit pseudouridine synthase A6e-1064.7
NC_014314:755166:756401756401757201801Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completepseudouridine synthase1e-0963.5
NC_014538:1311500:131510513151051315815711Thermoanaerobacter sp. X513 chromosome, complete genomepseudouridine synthase3e-0962.4
NC_014964:1169925:118428911842891184999711Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completepseudouridine synthase3e-0962.4
NC_010320:1585974:159856715985671599277711Thermoanaerobacter sp. X514 chromosome, complete genomepseudouridine synthase3e-0962.4
NC_010321:1177238:119209811920981192808711Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completepseudouridine synthase3e-0962.4
NC_016803:465453:486678486678487433756Desulfovibrio desulfuricans ND132 chromosome, complete genomepseudouridine synthase1e-0860.5
NC_004578:4781326:478496247849624785654693Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0859.7
NC_015975:1493636:149292714929271493649723Lactobacillus ruminis ATCC 27782 chromosome, complete genomeribosomal small subunit pseudouridine synthase A5e-0858.2
NC_013501:1547508:154673015467301547536807Rhodothermus marinus DSM 4252, complete genomeRNA-binding S4 domain protein6e-0754.7
NC_007677:1847913:186170318617031862452750Salinibacter ruber DSM 13855, complete genomeribosomal large subunit pseudouridine synthase B6e-0754.7
NC_014032:1911500:192506119250611925846786Salinibacter ruber M8 chromosome, complete genomeribosomal large subunit pseudouridine synthase B6e-0754.7
NC_013894:543901:561979561979562722744Thermocrinis albus DSM 14484 chromosome, complete genomepseudouridine synthase6e-0651.2