Pre_GI: BLASTP Hits

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Query: NC_008700:2451798:2474001 Shewanella amazonensis SB2B, complete genome

Start: 2474001, End: 2474789, Length: 789

Host Lineage: Shewanella amazonensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from shallow marine deposits (coastal shelf mud) of the Amazon River delta off of the coast of Brazil. Iron-reducing bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella amazonensis is capable of anaerobically reducing iron, manganese, and sulfur compounds and may be important to the cycling of these compounds in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009092:1684467:170233717023371703086750Shewanella loihica PV-4, complete genomeanti-ECFsigma factor, ChrR6e-36150
NC_004459:1794540:181057718105771811245669Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative transcriptional activator4e-26118
NC_012880:1711062:172424417242441724621378Dickeya dadantii Ech703, complete genomeanti-ECFsigma factor, ChrR9e-0754.3
NC_014502:113839:133104133104133757654Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequenceanti-ECF sigma factor ChrR1e-0653.9
NC_009925:2240871:225630122563012256981681Acaryochloris marina MBIC11017, complete genomehypothetical protein4e-0652