Pre_GI: BLASTP Hits

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Query: NC_008700:1627401:1646667 Shewanella amazonensis SB2B, complete genome

Start: 1646667, End: 1647557, Length: 891

Host Lineage: Shewanella amazonensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from shallow marine deposits (coastal shelf mud) of the Amazon River delta off of the coast of Brazil. Iron-reducing bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella amazonensis is capable of anaerobically reducing iron, manganese, and sulfur compounds and may be important to the cycling of these compounds in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007626:697926:722387722387723280894Magnetospirillum magneticum AMB-1, complete genomeIsopropylmalate/homocitrate/citramalate synthase5e-101367
NC_011527:1443076:144307614430761443975900Coxiella burnetii CbuG_Q212, complete genomehydroxymethylglutaryl-CoA lyase2e-98358
NC_009727:1542000:154394015439401544839900Coxiella burnetii Dugway 7E9-12, complete genomehydroxymethylglutaryl-CoA lyase2e-98358
NC_011528:1282691:128269112826911283590900Coxiella burnetii CbuK_Q154, complete genomehydroxymethylglutaryl-CoA lyase5e-98357
NC_005296:2860000:288100028810002881905906Rhodopseudomonas palustris CGA009, complete genome3-hydroxy-3-methylglutaryl-CoA lyase2e-85315
NC_013446:3520500:353669135366913537584894Comamonas testosteroni CNB-2, complete genomepyruvate carboxyltransferase4e-85314
NC_014623:5181000:518327651832765184253978Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepyruvate carboxyltransferase4e-77288
NC_021171:1689518:169858416985841699501918Bacillus sp. 1NLA3E, complete genomehydroxymethylglutaryl-CoA lyase2e-75282
NC_007802:1093785:111099111109911111845855Jannaschia sp. CCS1, complete genomeHydroxymethylglutaryl-CoA lyase2e-72272
NC_014318:1537732:155728815572881558223936Amycolatopsis mediterranei U32 chromosome, complete genomehydroxymethylglutaryl-CoA lyase4e-68258
NC_013791:2273389:228100322810032281917915Bacillus pseudofirmus OF4 chromosome, complete genomehydroxymethylglutaryl-CoA lyase6e-68257
NC_014098:1258559:127455112745511275459909Bacillus tusciae DSM 2912 chromosome, complete genomepyruvate carboxyltransferase2e-64246
NC_011961:528837:538904538904539809906Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencehydroxymethylglutaryl-CoA lyase, (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase)3e-61235
NC_002570:1220180:123086212308621231773912Bacillus halodurans C-125, complete genomehydroxymethylglutaryl-CoA lyase2e-60233
NC_016593:762216:788713788713789612900Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completepyruvate carboxyltransferase2e-58226
NC_020210:661236:670371670371671270900Geobacillus sp. GHH01, complete genomehydroxymethylglutaryl-CoA lyase1e-57223
NC_014916:22644:293372933730221885Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequencepyruvate carboxyltransferase2e-57222
NC_013412:33834:145414542338885Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequencepyruvate carboxyltransferase2e-57222
NC_009512:5632591:565196556519655652900936Pseudomonas putida F1, complete genomepyruvate carboxyltransferase2e-55216
NC_009921:4399000:440358844035884404478891Frankia sp. EAN1pec, complete genomepyruvate carboxyltransferase6e-54211
NC_002928:507749:540705540705541652948Bordetella parapertussis 12822, complete genomeputative hydroxymethylglutaryl-CoA lyase6e-54211
NC_010511:1351000:135147713514771352394918Methylobacterium sp. 4-46 chromosome, complete genomepyruvate carboxyltransferase3e-53209
NC_013316:891782:895342895342896238897Clostridium difficile R20291, complete genomeputative hydroxymethylglutaryl-CoA lyase6e-53207
NC_013315:895500:897727897727898623897Clostridium difficile CD196 chromosome, complete genomehydroxymethylglutaryl-CoA lyase6e-53207
NC_017179:905347:907504907504908400897Clostridium difficile BI1, complete genomeputative hydroxymethylglutaryl-CoA lyase6e-53207
NC_009089:965959:968115968115969011897Clostridium difficile 630, complete genomeputative hydroxymethylglutaryl-CoA lyase1e-52206
NC_012032:448161:470191470191471132942Chloroflexus sp. Y-400-fl, complete genomepyruvate carboxyltransferase5e-51201
NC_010175:448020:470049470049470990942Chloroflexus aurantiacus J-10-fl, complete genomepyruvate carboxyltransferase5e-51201
NC_008260:2992813:3012622301262230136741053Alcanivorax borkumensis SK2, complete genomehydroxymethylglutaryl-CoA lyase2e-50199
NC_013508:2130681:214523821452382146176939Edwardsiella tarda EIB202, complete genomeputative hydroxymethylglutaryl-CoA lyase4e-48191
NC_015381:4182194:419556941955694196555987Burkholderia gladioli BSR3 chromosome 1, complete sequencepyruvate carboxyltransferase5e-48191
NC_008148:1711679:172169517216951722588894Rubrobacter xylanophilus DSM 9941, complete genomepyruvate carboxyltransferase8e-45181
NC_016148:1877711:191195819119581912878921Thermovirga lienii DSM 17291 chromosome, complete genomepyruvate carboxyltransferase7e-45181
NC_012982:1569426:158914515891451590107963Hirschia baltica ATCC 49814, complete genomepyruvate carboxyltransferase1e-43177
NC_015723:589727:591846591846592799954Cupriavidus necator N-1 chromosome 2, complete sequencehydroxymethylglutaryl-CoA lyase YngG1e-42173
NC_016906:3666358:366862836686283669533906Gordonia polyisoprenivorans VH2 chromosome, complete genomehydroxymethylglutaryl-CoA lyase YngG7e-42171
NC_015458:2338437:233750223375022338440939Pusillimonas sp. T7-7 chromosome, complete genomehydroxymethylglutaryl-CoA lyase2e-28126
NC_014738:1507641:150908415090841509932849Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hydroxymethylglutaryl-CoA lyase2e-27123
NC_014655:3345204:335046833504683351310843Leadbetterella byssophila DSM 17132 chromosome, complete genomehydroxymethylglutaryl-CoA lyase3e-27122
NC_020125:194691:218941218941219759819Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein1e-25117
NC_020302:146807:164963164963165919957Corynebacterium halotolerans YIM 70093 = DSM 44683, completehydroxymethylglutaryl-CoA lyase3e-24112
NC_013132:3605317:360783636078363608681846Chitinophaga pinensis DSM 2588, complete genomeHydroxymethylglutaryl-CoA lyase1e-1997.1
NC_014221:3175013:319765031976503198549900Truepera radiovictrix DSM 17093 chromosome, complete genomeHydroxymethylglutaryl-CoA lyase2e-1893.6
NC_015727:1050500:105631110563111056805495Cupriavidus necator N-1 plasmid BB1p, complete sequence2e-1376.6
NC_013967:1375255:1377383137738313787051323Haloferax volcanii DS2 chromosome, complete genome2-isopropylmalate synthase2e-1170.1
NC_012032:398419:4194204194204205471128Chloroflexus sp. Y-400-fl, complete genomepyruvate carboxyltransferase1e-1067.4
NC_010175:398453:4192794192794204061128Chloroflexus aurantiacus J-10-fl, complete genomepyruvate carboxyltransferase1e-1067.4
NC_011898:3973627:3997446399744639989721527Clostridium cellulolyticum H10, complete genome2-isopropylmalate synthase2e-1067
NC_015573:1671000:1673841167384116750071167Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehomocitrate synthase6e-1065.1
NC_014122:393856:4129364129364144711536Methanocaldococcus infernus ME chromosome, complete genomeisopropylmalate/citramalate/homocitrate synthase1e-0964.3
NC_007681:218921:2445282445282460271500Methanosphaera stadtmanae DSM 3091, complete genomeLeuA11e-0963.9
NC_007503:1111457:1140042114004211410521011Carboxydothermus hydrogenoformans Z-2901, complete genome4-hydroxy-2-ketovalerate aldolase2e-0963.2
NC_015216:2113556:2114881211488121160561176Methanobacterium sp. AL-21 chromosome, complete genomeisopropylmalate/citramalate/homocitrate synthase3e-0962.8
NC_013156:226215:2383302383302398861557Methanocaldococcus fervens AG86, complete genomeisopropylmalate/citramalate/homocitrate synthase3e-0962.4
NC_017192:2505369:2527445252744525284731029Arcobacter sp. L, complete genome4-hydroxy-2-oxovalerate aldolase4e-0962.4
NC_007796:2607240:2612459261245926138981440Methanospirillum hungatei JF-1, complete genomepyruvate carboxyltransferase1e-0860.8
NC_021182:3438601:344026034402603441069810Clostridium pasteurianum BC1, complete genomeisopropylmalate/homocitrate/citramalate synthase1e-0860.5
NC_015416:2113949:2131405213140521329611557Methanosaeta concilii GP-6 chromosome, complete genome(R)-citramalate synthase3e-0859.7
NC_014933:3755000:3756517375651737580581542Bacteroides helcogenes P 36-108 chromosome, complete genome(R)-citramalate synthase2e-0859.7
NC_017270:2500815:2500815250081525023651551Vibrio cholerae LMA3984-4 chromosome chromosome I, complete2-isopropylmalate synthase3e-0859.3
NC_003551:260000:2638282638282653571530Methanopyrus kandleri AV19, complete genomeIsopropylmalate/homocitrate/citramalate synthase homolog4e-0858.9
NC_015499:491423:4923484923484935021155Thermodesulfobium narugense DSM 14796 chromosome, complete genome(R)-citramalate synthase4e-0858.9
NC_007181:1094422:1111101111110111125071407Sulfolobus acidocaldarius DSM 639, complete genome2-isopropylmalate synthase4e-0858.9
NC_010546:4144449:4144449414444941460621614Cyanothece sp. ATCC 51142 chromosome circular, complete sequence2-isopropylmalate synthase5e-0858.9
NC_012589:1241782:1254018125401812554031386Sulfolobus islandicus L.S.2.15, complete genomehomocitrate synthase6e-0858.5
NC_017275:1189162:1201385120138512027701386Sulfolobus islandicus HVE10/4 chromosome, complete genomeAsnC family transcriptional regulator6e-0858.5
NC_017276:1051707:1065781106578110671661386Sulfolobus islandicus REY15A chromosome, complete genomeAsnC family transcriptional regulator6e-0858.5
NC_012632:1249334:1264638126463812660231386Sulfolobus islandicus M.16.27 chromosome, complete genome2-isopropylmalate synthase6e-0858.2
NC_012623:1405893:1410075141007514114601386Sulfolobus islandicus Y.N.15.51 chromosome, complete genome2-isopropylmalate synthase6e-0858.2
NC_000909:1123161:1137352113735211389081557Methanocaldococcus jannaschii DSM 2661, complete genome2-isopropylmalate synthase7e-0858.2
NC_011565:665515:6718096718096729331125Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,homocitrate synthase7e-0858.2
NC_010085:1174917:1183825118382511850061182Nitrosopumilus maritimus SCM1, complete genomepyruvate carboxyltransferase8e-0858.2
NC_019970:2263427:2268513226851322696641152Thermoanaerobacterium thermosaccharolyticum M0795, complete genomehomocitrate synthase NifV9e-0857.8
NC_013799:1012884:102926410292641030241978Hydrogenobacter thermophilus TK-6, complete genomehomocitrate synthase9e-0857.8
NC_017161:1012874:102925410292541030231978Hydrogenobacter thermophilus TK-6 chromosome, complete genomepyruvate carboxyltransferase9e-0857.8
NC_013850:4612812:4612812461281246145811770Klebsiella variicola At-22 chromosome, complete genomeoxaloacetate decarboxylase alpha subunit9e-0857.8
NC_016856:819482:8304718304718322461776Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S1e-0757
NC_016633:1130705:1141233114123311428491617Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome2-isopropylmalate synthase, bacterial type2e-0757
NC_010102:2287934:2292299229229922940681770Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0756.6
NC_011149:779903:7938077938077955761770Salmonella enterica subsp. enterica serovar Agona str. SL483,oxaloacetate decarboxylase alpha subunit2e-0756.6
NC_000961:1481685:1514960151496015160451086Pyrococcus horikoshii OT3, complete genome2-isopropylmalate synthase2e-0756.6
NC_016860:857500:8689598689598707341776Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase2e-0756.6
NC_016810:819489:8293858293858311601776Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase subunit alpha2e-0756.6
NC_016857:819429:8293858293858311601776Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74pyruvate carboxylase subunit B2e-0756.6
NC_011205:839425:8543158543158560871773Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853oxaloacetate decarboxylase2e-0756.6
NC_009648:838000:8503588503588521241767Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeoxaloacetate decarboxylase2e-0756.6
NC_006905:848000:8587698587698605441776Salmonella enterica subsp. enterica serovar Choleraesuis stroxaloacetate decarboxylase2e-0756.6
NC_011274:793681:8071718071718089431773Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91oxaloacetate decarboxylase3e-0756.2
NC_011080:819103:8344828344828362571776Salmonella enterica subsp. enterica serovar Newport str. SL254,oxaloacetate decarboxylase alpha subunit3e-0756.2
NC_011083:862901:8783688783688801371770Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oxaloacetate decarboxylase alpha subunit3e-0756.2
NC_013194:4964000:4964034496403449651611128Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehomocitrate synthase2e-0756.2
NC_017046:819414:8293708293708311451776Salmonella enterica subsp. enterica serovar Typhimurium str. 798oxaloacetate decarboxylase subunit alpha2e-0756.2
NC_013887:812091:8258038258038273591557Methanocaldococcus sp. FS406-22 chromosome, complete genomeisopropylmalate/citramalate/homocitrate synthase2e-0756.2
NC_011283:4767269:4767269476726947690381770Klebsiella pneumoniae 342 chromosome, complete genomeoxaloacetate decarboxylase4e-0755.8
NC_011294:781170:7892857892857910541770Salmonella enterica subsp. enterica serovar Enteritidis stroxaloacetate decarboxylase4e-0755.8
NC_021184:569653:5876865876865892151530Desulfotomaculum gibsoniae DSM 7213, complete genome2-isopropylmalate synthase, bacterial type3e-0755.8
NC_014964:1169925:1187207118720711886041398Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeConserved carboxylase region5e-0755.5
NC_010321:1177238:1195016119501611964131398Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeoxaloacetate decarboxylase5e-0755.5
NC_014538:1311500:1311500131150013128971398Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein5e-0755.5
NC_010320:1585974:1601485160148516028821398Thermoanaerobacter sp. X514 chromosome, complete genomeoxaloacetate decarboxylase5e-0755.5
NC_018867:993903:1012972101297210145071536Dehalobacter sp. CF chromosome, complete genome2-isopropylmalate synthase5e-0755.5
NC_015636:1477221:1501063150106315025381476Methanothermococcus okinawensis IH1 chromosome, complete genomeisopropylmalate/citramalate/homocitrate synthase4e-0755.5
NC_013526:911909:9460589460589472331176Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomehomocitrate synthase4e-0755.5
NC_013956:3641368:3659260365926036603811122Pantoea ananatis LMG 20103 chromosome, complete genomeLeuA24e-0755.5
NC_016816:792460:8041258041258052461122Pantoea ananatis LMG 5342, complete genometrans-homoaconitate synthase4e-0755.5
NC_014933:3755000:3760239376023937617351497Bacteroides helcogenes P 36-108 chromosome, complete genome2-isopropylmalate synthase5e-0755.1
NC_016831:2209834:2214189221418922159731785Salmonella enterica subsp. enterica serovar Gallinarum/pullorumoxaloacetate decarboxylase subunit alpha6e-0755.1
NC_008343:1631780:1636873163687316384561584Granulibacter bethesdensis CGDNIH1, complete genome2-isopropylmalate synthase8e-0754.7
NC_008702:2039462:2039462203946220405051044Azoarcus sp. BH72, complete genome4-hydroxy 2-oxovalerate aldolase7e-0754.7
NC_015555:1989463:1996596199659619977471152Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehomocitrate synthase9e-0754.3
NC_009832:3313058:3328606332860633296071002Serratia proteamaculans 568, complete genomepyruvate carboxyltransferase1e-0654.3
NC_009617:68779:8997389973911421170Clostridium beijerinckii NCIMB 8052 chromosome, complete genometrans-homoaconitate synthase1e-0653.9
NC_015731:867377:8673778673778689091533Nitrosomonas sp. Is79A3 chromosome, complete genome2-isopropylmalate synthase1e-0653.9
NC_018643:937486:9374869374869390571572Alpha proteobacterium HIMB5 chromosome, complete genome2-isopropylmalate synthase2e-0653.9
NC_013730:7118798:7147419714741971485581140Spirosoma linguale DSM 74, complete genomepyruvate carboxyltransferase2e-0653.5
NC_012125:793812:8073268073268091011776Salmonella enterica subsp. enterica serovar Paratyphi C strainoxaloacetate decarboxylase2e-0653.5
NC_015222:2136657:2154091215409121556231533Nitrosomonas sp. AL212 chromosome, complete genome2-isopropylmalate synthase2e-0653.1
NC_012881:478042:4894504894504905561107Desulfovibrio salexigens DSM 2638, complete genomepyruvate carboxyltransferase3e-0653.1
NC_014002:631649:6500216500216517511731Methanohalophilus mahii DSM 5219 chromosome, complete genomepyruvate carboxylase subunit B3e-0652.8
NC_015160:3448570:3456388345638834578841497Odoribacter splanchnicus DSM 20712 chromosome, complete genome2-isopropylmalate synthase3e-0652.8
NC_014836:312353:3321473321473337211575Desulfurispirillum indicum S5 chromosome, complete genome2-isopropylmalate synthase5e-0652
NC_015573:649800:6515296515296525571029Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome4-hydroxy-2-oxovalerate aldolase5e-0652
NC_010546:553774:5574135574135585461134Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehomocitrate synthase5e-0652
NC_014393:2905248:2922869292286929240201152Clostridium cellulovorans 743B chromosome, complete genomehomocitrate synthase5e-0652
NC_016148:141011:1487161487161502571542Thermovirga lienii DSM 17291 chromosome, complete genome2-isopropylmalate synthase5e-0652
NC_000868:416958:4196564196564207411086Pyrococcus abyssi GE5, complete genome2-isopropylmalate synthase5e-0652
NC_013939:1688400:1693524169352416950741551Deferribacter desulfuricans SSM1, complete genome2-isopropylmalate synthase7e-0651.6
NC_007778:3784104:3809433380943338110071575Rhodopseudomonas palustris HaA2, complete genome2-isopropylmalate synthase9e-0651.2
NC_021171:2019755:2019755201975520207771023Bacillus sp. 1NLA3E, complete genome4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase9e-0651.2
NC_014328:522045:537267537267538067801Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehomocitrate synthase subunit alpha9e-0651.2