Pre_GI: BLASTP Hits

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Query: NC_008699:1816392:1818821 Nocardioides sp. JS614, complete genome

Start: 1818821, End: 1819633, Length: 813

Host Lineage: Nocardioides; Nocardioides; Nocardioidaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This bacterium grows quickly and efficiently on media containing vinyl chloride and ethene. If starved of vinyl chloride for one day, it will not recover for more than 40 days. This strain was placed in the Nocardioides genus on the basis of 16S rRNA analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:5455060:5471736547173654728181083Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor1e-86319
NC_013595:9149273:916531191653119166111801Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily3e-85315
NC_008578:591357:595878595878596741864Acidothermus cellulolyticus 11B, complete genomeRNA polymerase, sigma 28 subunit5e-82304
NC_021177:4221309:422601242260124226878867Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor2e-74278
NC_013159:2913927:292880029288002929600801Saccharomonospora viridis DSM 43017, complete genomeRNA polymerase sigma factor, sigma-70 family4e-68258
NC_015312:3675148:372328137232813724171891Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeSigB/F/G subfamily RNA polymerase sigma-28 subunit5e-59228
NC_021177:4221309:422711342271134228033921Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor1e-57223
NC_009922:1:102491024911061813Alkaliphilus oremlandii OhILAs, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family2e-55216
NC_003155:883500:890067890067890906840Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma factor1e-55216
NC_018664:1:9917991710708792Clostridium acidurici 9a chromosome, complete genomeRNA polymerase factor sigma-70 RpoD3e-53208
NC_016109:785819:791016791016791861846Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor6e-53207
NC_013595:3388000:338860033886003389376777Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-52206
NC_014614:6115:116041160412425822Clostridium sticklandii, complete genomeRNA polymerase sigma-37 factor (sigma-B)3e-50198
NC_009012:3421000:342571634257163426474759Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma 28 subunit2e-47189
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome1e-46186
NC_004193:375416:655820655820656611792Oceanobacillus iheyensis HTE831, complete genomesigma factor B1e-44179
NC_012673:2023297:202719120271912027991801Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma 28 subunit, Sig B/F/G subfamily2e-44179
NC_011898:426951:452033452033452782750Clostridium cellulolyticum H10, complete genomeRNA polymerase, sigma 28 subunit, Sig B/F/G subfamily1e-43176
NC_014219:567033:568900568900569706807Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, LuxR family2e-42172
NC_014551:483773:484547484547485335789Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sigma-37 factor (sigma(B))6e-42171
NC_017188:461177:461951461951462739789Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigB6e-42171
NC_017190:466236:466684466684467472789Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma-37 factor (sigma(B))6e-42171
NC_017191:467207:467981467981468769789Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigB6e-42171
NC_019842:484933:485381485381486169789Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,RNA polymerase sigma factor SigB5e-42171
NC_009725:496443:497217497217498005789Bacillus amyloliquefaciens FZB42, complete genomeSigB5e-42171
NC_020410:495184:495958495958496746789Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-B factor5e-42171
NC_018704:347948:352252352252353040789Amphibacillus xylanus NBRC 15112, complete genomeRNA polymerase sigma-B factor5e-42171
NC_013316:1:9857985710630774Clostridium difficile R20291, complete genomeRNA polymerase sigma-B factor5e-41167
NC_009089:1:9857985710630774Clostridium difficile 630, complete genomeRNA polymerase sigma-B factor5e-41167
NC_006582:883922:886206886206886991786Bacillus clausii KSM-K16, complete genomesigma factor B3e-40165
NC_016047:637778:639621639621640409789Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeRNA polymerase sigma-B factor5e-40164
NC_014479:509919:510693510693511481789Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeRNA polymerase sigma factor SigB7e-40164
NC_014976:2735423:273726627372662738054789Bacillus subtilis BSn5 chromosome, complete genomeRNA polymerase sigma factor SigB1e-39163
NC_000964:521975:522417522417523211795Bacillus subtilis subsp. subtilis str. 168, complete genomesigma factor B1e-39163
NC_010556:2773396:279301027930102793807798Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family3e-39162
NC_019896:3491000:351722135172213518015795Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA polymerase sigma factor SigB2e-39162
NC_012121:1578190:159385115938511594621771Staphylococcus carnosus subsp. carnosus TM300, complete genomesigma factor B4e-39161
NC_009454:1246393:126549412654941266273780Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit1e-38160
NC_017195:2273216:229212822921282292895768Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-F factor1e-38160
NC_014538:1311500:133260513326051333345741Thermoanaerobacter sp. X513 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily3e-38159
NC_014377:1227850:123522212352221235947726Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma subunit, RpoX/SigF2e-37155
NC_015589:3085442:308799830879983088780783Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRNA polymerase sigma-F factor2e-37155
NC_016593:2370000:239025823902582391010753Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeRNA polymerase sigma-F factor2e-36153
NC_020291:1389114:139335713933571394130774Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-G factor SigG3e-34145
NC_014220:837926:842737842737843507771Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily5e-34144
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg6e-34144
NC_018665:2563375:258281625828162583421606Exiguobacterium antarcticum B7 chromosome, complete genomeRNA polymerase sigma factor4e-33141
NC_013169:1410384:141217914121791412964786Kytococcus sedentarius DSM 20547, complete genomeRNA polymerase sigma factor, sigma-70 family2e-30133
NC_005125:2811986:283022128302212830985765Gloeobacter violaceus PCC 7421, complete genomesigma factor SigF5e-28124
NC_016048:2734563:275766727576672758377711Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase sigma factor3e-27122
NC_011071:4000620:4024096402409640259521857Stenotrophomonas maltophilia R551-3, complete genomeRNA polymerase, sigma 70 subunit, RpoD9e-23107
NC_015947:3991696:4005239400523940070921854Burkholderia sp. JV3 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD9e-23107
NC_011296:909558:9211909211909226291440Thermodesulfovibrio yellowstonii DSM 11347, complete genomeRNA polymerase sigma factor RpoD1e-22107
NC_007644:626992:6482906482906493751086Moorella thermoacetica ATCC 39073, complete genomesigma 38 (RpoS)2e-22106
NC_007508:4476726:4490897449089744927741878Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor2e-22106
NC_007086:4489153:4499598449959845014721875Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA polymerase sigma factor2e-22106
NC_003902:4430621:4442015444201544438891875Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor RpoD2e-22106
NC_014314:755166:7722247722247737321509Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeRNA polymerase sigma 70 subunit RpoD subfamily3e-22105
NC_017033:276741:2903512903512922311881Frateuria aurantia DSM 6220 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-22105
NC_014220:1670000:1685266168526616863511086Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily5e-22105
NC_009921:5202607:5225702522570252269041203Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma 70 subunit, RpoD family5e-22105
NC_010278:1625695:1649248164924816511071860Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RNA polymerase sigma factor RpoD7e-22104
NC_010939:1633000:1651959165195916538181860Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeRNA polymerase sigma factor 707e-22104
NC_010296:5002428:5008809500880950100591251Microcystis aeruginosa NIES-843, complete genomeRNA polymerase sigma factor RpoD7e-22104
NC_009053:1668500:1688201168820116900601860Actinobacillus pleuropneumoniae L20, complete genomeRNA polymerase sigma factor 707e-22104
NC_013165:2440883:245653524565352457479945Slackia heliotrinireducens DSM 20476, complete genomeRNA polymerase sigma factor, sigma-70 family7e-22104
NC_013510:1849751:1870803187080318724821680Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily6e-22104
NC_016800:1411000:1439503143950314410831581Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor A5e-22104
NC_016783:1397975:1431953143195314335331581Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_016782:1385800:1411361141136114129411581Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_016787:1350676:1402928140292814045201593Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_012034:802453:8024538024538037061254Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-21103
NC_015557:1412917:1423520142352014252561737Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-21103
NC_015587:1414304:1423388142338814251241737Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-21103
NC_011126:1430608:1443052144305214447881737Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-21103
NC_016625:1259778:1274704127470412769172214Burkholderia sp. YI23 chromosome 2, complete sequenceRNA polymerase sigma-70 subunit RpoD2e-21103
NC_016785:1357500:1389513138951313910931581Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_016786:1359064:1411626141162614132061581Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_016799:1439000:1463172146317214647521581Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_017303:1297793:1320477132047713220301554Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRNA polymerase sigma factor rpoD9e-22103
NC_016781:1297782:1320469132046913220221554Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor rpoD9e-22103
NC_002935:1378566:1423091142309114245991509Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor9e-22103
NC_013715:767722:7816667816667830481383Rothia mucilaginosa DY-18, complete genomeDNA-directed RNA polymerase, sigma subunit1e-21103
NC_016790:1345638:1379067137906713805871521Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_016788:1376000:1406465140646514079851521Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_016802:1317365:1396152139615213977321581Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_016801:1422500:1453156145315614547361581Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor A1e-21103
NC_010805:530876:5350295350295374432415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase primary sigma factor4e-21102
NC_011761:2067695:2080861208086120827351875Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigma factor RpoD4e-21102
NC_012721:1986436:2004708200470820071252418Burkholderia glumae BGR1 chromosome 2, complete genomeRNA polymerase, sigma 70 subunit, RpoD family protein4e-21102
NC_009255:1071868:1076072107607210785012430Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRNA polymerase sigma factor RpoD4e-21102
NC_013416:1429881:1448118144811814499681851Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRNA polymerase sigma factor RpoD (Sigma-70)4e-21102
NC_010086:1907959:1937861193786119402752415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD4e-21102
NC_007435:1077792:1089393108939310917952403Burkholderia pseudomallei 1710b chromosome II, complete sequenceRNA polymerase sigma factor3e-21102
NC_007650:722961:7258447258447282462403Burkholderia thailandensis E264 chromosome II, complete sequenceRNA polymerase sigma factor RpoD3e-21102
NC_016629:3396500:3420075342007534218591785Desulfovibrio africanus str. Walvis Bay chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit3e-21102
NC_009075:2428248:2436729243672924389392211Burkholderia pseudomallei 668 chromosome II, complete sequenceRNA polymerase sigma factor RpoD3e-21102
NC_009078:2351046:2359522235952223617322211Burkholderia pseudomallei 1106a chromosome II, complete sequenceRNA polymerase sigma factor RpoD3e-21102
NC_006351:2398403:2406884240688424089262043Burkholderia pseudomallei K96243 chromosome 2, complete sequenceRNA polymerase sigma factor2e-21102
NC_016789:1432000:1456893145689314584461554Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor A5e-21101
NC_010552:752007:7562057562057586222418Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD5e-21101
NC_016513:1761830:1782400178240017842501851Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA-directed RNA polymerase sigma subunit RpoD4e-21101
NC_009659:543000:5459655459655484452481Janthinobacterium sp. Marseille chromosome, complete genomeRNA polymerase primary sigma factor1e-20100
NC_015856:1182974:1198779119877912012742496Collimonas fungivorans Ter331 chromosome, complete genomeRNA polymerase sigma factor1e-20100
NC_013510:3065000:3081198308119830822801083Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-20100
NC_016602:3122700:3127558312755831294441887Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD1e-20100
NC_009930:4909:293182931830124807Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma-70 factor1e-20100
NC_010730:1724443:172492517249251725653729Sulfurihydrogenibium sp. YO3AOP1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-20100
NC_002505:514732:5504075504075522841878Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA polymerase sigma factor1e-20100
NC_016445:2938887:2961443296144329633201878Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA polymerase primary sigma factor1e-20100
NC_012668:62500:6800568005699331929Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD1e-20100
NC_007509:644000:6590416590416610742034Burkholderia sp. 383 chromosome 3, complete sequencesigma 70 (RpoD)9e-21100
NC_014323:961825:9651409651409676922553Herbaspirillum seropedicae SmR1 chromosome, complete genomeRNA polymerase sigma-70 factor transcription regulator protein7e-21100
NC_014118:2316000:2320588232058823225851998Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD7e-21100
NC_008268:1748635:1757720175772017592821563Rhodococcus sp. RHA1, complete genomesigma factor, sigma 70 type, probable group 22e-2099.8
NC_009952:2381601:2381601238160123835951995Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor2e-2099.8
NC_008463:632869:6471916471916490441854Pseudomonas aeruginosa UCBPP-PA14, complete genomesigma factor RpoD2e-2099.8
NC_008260:2340824:2350147235014723520481902Alcanivorax borkumensis SK2, complete genomeRNA polymerase sigma factor RpoD2e-2099.8
NC_004545:15650:5831358313601421830Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor RpoD2e-2099.4
NC_015713:2453409:2453409245340924550731665Simkania negevensis Z chromosome gsn.131, complete genomerNA polymerase sigma factor rpoD2e-2099.4
NC_013510:2782240:2799999279999928013331335Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-2099.4
NC_009512:469000:4860034860034878531851Pseudomonas putida F1, complete genomeRNA polymerase, sigma 70 subunit, RpoD4e-2099
NC_009465:90000:1217341217341235451812Candidatus Vesicomyosocius okutanii HA, complete genomeDNA-directed RNA polymerase sigma-70 factor3e-2099
NC_015733:443122:4575524575524594021851Pseudomonas putida S16 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-2099
NC_009434:796878:8138468138468155551710Pseudomonas stutzeri A1501, complete genomeRNA polymerase sigma factor RpoD3e-2099
NC_015379:6226661:6226661622666162285081848Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,RNA polymerase sigma factor (sigma-70)3e-2099
NC_004578:568236:5888465888465906961851Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor4e-2098.6
NC_009439:4404942:4404942440494244067891848Pseudomonas mendocina ymp, complete genomeRNA polymerase sigma factor RpoD4e-2098.6
NC_007005:5500196:5502219550221955040691851Pseudomonas syringae pv. syringae B728a, complete genomeRNA polymerase sigma factor4e-2098.6
NC_017160:676249:6950996950996961571059Yersinia pestis D182038 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-2098.6
NC_013171:1194500:1219236121923612210441809Anaerococcus prevotii DSM 20548, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-2098.6
NC_007974:1135863:1146392114639211482451854Ralstonia metallidurans CH34 chromosome 2, complete sequencesigma 70 (RpoD)4e-2098.6
NC_007912:909112:9259819259819278221842Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family4e-2098.6
NC_018677:111500:1414281414281431641737Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoD4e-2098.6
NC_015318:249445:2540152540152554901476Hippea maritima DSM 10411 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-2098.6
NC_015224:3892972:3894878389487838967161839Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,RNA polymerase sigma factor RpoD5e-2098.2
NC_008800:4013298:4019198401919840210361839Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,RNA polymerase sigma factor RpoD5e-2098.2
NC_016816:674171:6861796861796880231845Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor RpoD5e-2098.2
NC_008149:587689:6087836087836106211839Yersinia pestis Nepal516, complete genomeRNA polymerase sigma factor RpoD5e-2098.2
NC_009708:633054:6495746495746514121839Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRNA polymerase sigma factor RpoD5e-2098.2
NC_014029:729675:7507627507627526001839Yersinia pestis Z176003 chromosome, complete genomeRNA polymerase sigma factor RpoD5e-2098.2
NC_017154:671816:6929146929146947521839Yersinia pestis D106004 chromosome, complete genomeRNA polymerase sigma factor RpoD5e-2098.2
NC_014837:3739408:3746389374638937482331845Pantoea sp. At-9b chromosome, complete genomeRNA polymerase,sigma 70 subunit,RpoD5e-2098.2
NC_014657:914071:916231916231917052822Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily7e-2097.8
NC_014618:690056:7265327265327283761845Enterobacter cloacae SCF1 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD7e-2097.8
NC_015663:770485:7723817723817742251845Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA polymerase sigma factor RpoD7e-2097.8
NC_009380:1663545:166747116674711668469999Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor SigB6e-2097.8
NC_014393:1782811:1798057179805717991481092Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1997.1
NC_013525:1953920:1974765197476519765551791Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1996.7
NC_010424:531727:5317275317275328091083Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma 70 subunit, RpoD family2e-1996.7
NC_009091:1598044:1616615161661516176341020Prochlorococcus marinus str. MIT 9301, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family1e-1996.7
NC_005070:2374850:239942623994262400412987Synechococcus sp. WH 8102, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family1e-1996.7
NC_009831:1255995:1273107127310712749451839Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family2e-1996.3
NC_006270:2591317:2606437260643726075581122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor2e-1996.3
NC_007947:2447635:2479188247918824811221935Methylobacillus flagellatus KT, complete genomesigma 70 (RpoD)2e-1996.3
NC_014623:7331860:7336519733651973386392121Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma factor rpod2e-1996.3
NC_006322:2592176:2607296260729626084171122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor2e-1996.3
NC_010676:2869936:2882060288206028840571998Burkholderia phytofirmans PsJN chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD2e-1996.3
NC_014733:2363838:2377778237777823796941917Methylovorus sp. MP688 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod2e-1996.3
NC_012969:2476318:2508883250888325107991917Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD2e-1996.3
NC_009727:357206:3772503772503793462097Coxiella burnetii Dugway 7E9-12, complete genomeRNA polymerase sigma factor RpoD2e-1995.9
NC_002971:1523065:1541273154127315433692097Coxiella burnetii RSA 493, complete genomeRNA polymerase sigma factor RpoD2e-1995.9
NC_009929:58465:800918009180900810Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma-70 factor, putative3e-1995.9
NC_007645:6407370:6411603641160364135221920Hahella chejuensis KCTC 2396, complete genomeRNA polymerase sigma-70 factor RpoD3e-1995.5
NC_003366:2286083:2298082229808222992031122Clostridium perfringens str. 13, complete genomeRNA polymerase sigma factor3e-1995.5
NC_008262:2169262:2181235218123521823351101Clostridium perfringens SM101, complete genomeRNA polymerase sigma factor RpoD3e-1995.5
NC_019970:1991944:1999871199987120009441074Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase, sigma 70 subunit, RpoD5e-1995.1
NC_012968:2228943:2243624224362422455641941Methylotenera mobilis JLW8, complete genomeRNA polymerase, sigma 70 subunit, RpoD7e-1994.7
NC_009380:1663545:1684802168480216864301629Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor6e-1994.7
NC_018607:1134900:114385311438531144665813Brachyspira pilosicoli B2904 chromosome, complete genomeRNA polymerase sigma factor6e-1994.7
NC_019908:852230:859282859282860094813Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor WhiG6e-1994.7
NC_014330:2409559:242009924200992420911813Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor6e-1994.7
NC_018604:1329228:133817613381761338988813Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor6e-1994.7
NC_015555:863173:8722008722008732731074Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma 70 subunit, RpoD subfamily5e-1994.7
NC_016788:1376000:141350614135061414495990Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016787:1350676:141004114100411411030990Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016786:1359064:141872814187281419717990Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016785:1357500:139661513966151397604990Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016782:1385800:141846314184631419452990Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_002935:1378566:143012114301211431110990Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor8e-1994.4
NC_016790:1345638:138610813861081387097990Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016800:1411000:144660414466041447593990Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016801:1422500:146025714602571461246990Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016626:1669477:1686194168619416881401947Burkholderia sp. YI23 plasmid byi_1p, complete sequenceRNA polymerase sigma-70 subunit RpoD7e-1994.4
NC_007604:1586243:161346416134641614396933Synechococcus elongatus PCC 7942, complete genomeprincipal RNA polymerase sigma factor SigA7e-1994.4
NC_006576:12230:144341443415384951Synechococcus elongatus PCC 6301, complete genomegroup2 RNA polymerase sigma factor RpoD68e-1994.4
NC_016789:1432000:146396714639671464956990Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016783:1397975:143905514390551440044990Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_016802:1317365:140325414032541404243990Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor B8e-1994.4
NC_008700:312099:3187643187643216732910Shewanella amazonensis SB2B, complete genomeDNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein1e-1894
NC_015138:1582458:1597787159778716001292343Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRNA polymerase sigma-70 subunit RpoD1e-1894
NC_008752:1523768:1541468154146815438132346Acidovorax avenae subsp. citrulli AAC00-1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-1894
NC_012438:159927:161195161195161917723Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeRNA polymerase sigma-D factor (Sigma-28)9e-1994
NC_013592:1730505:174909117490911749813723Dickeya dadantii Ech586, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily9e-1994
NC_021182:2219286:2228867222886722299881122Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family9e-1994
NC_008054:1030994:1053267105326710543851119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor RpoD (Sigma-A)1e-1893.6
NC_017518:1610803:1612761161276116146891929Neisseria meningitidis NZ-05/33 chromosome, complete genomeRNA polymerase sigma factor rpoD1e-1893.6
NC_013016:1441424:1443383144338314453111929Neisseria meningitidis alpha14 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-1893.6
NC_017511:602000:6167016167016186291929Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-1893.6
NC_015707:705628:706734706734707471738Thermotoga thermarum DSM 5069 chromosome, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG2e-1893.2
NC_009831:1539159:154015015401501541121972Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family2e-1893.2
NC_016514:2950860:295907129590712959790720Enterobacter cloacae EcWSU1 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon2e-1892.8
NC_010723:915697:9156979156979168211125Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma factor RpoD2e-1892.8
NC_008529:1042220:1071584107158410727021119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)2e-1892.8
NC_015672:2236000:225557622555762256508933Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit2e-1892.8
NC_014500:3023762:303527230352723035994723Dickeya dadantii 3937 chromosome, complete genomeRNA polymerase sigma-28 (sigma F) factor3e-1892.4
NC_012912:1788308:181042918104291811151723Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG3e-1892.4
NC_016932:1309644:131240113124011313390990Corynebacterium pseudotuberculosis 316 chromosome, complete genomeRNA polymerase sigma factor sigB3e-1892
NC_016781:1327516:132751613275161328505990Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor sigB3e-1892
NC_015957:8677395:8696862869686286981061245Streptomyces violaceusniger Tu 4113 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit4e-1892
NC_014484:1163576:1170458117045811722001743Spirochaeta thermophila DSM 6192 chromosome, complete genomeRNA polymerase sigma factor4e-1892
NC_012880:1765920:184124818412481841970723Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG4e-1892
NC_005042:1719055:1722731172273117237501020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeDNA-directed RNA polymerase sigma subunit5e-1891.7
NC_014910:4026613:404772340477234048439717Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, flia/whig family5e-1891.7
NC_015422:4395388:441599244159924416708717Alicycliphilus denitrificans K601 chromosome, complete genomeRNA polymerase sigma 28 subunit FliA/WhiG5e-1891.7
NC_004547:1970686:198611819861181986840723Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar biosynthesis sigma factor FliA5e-1891.7
NC_013959:2449315:2470861247086124728251965Sideroxydans lithotrophicus ES-1 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD5e-1891.7
NC_004578:1719849:1727080172708017280871008Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor7e-1891.3
NC_010995:2547164:2553509255350925545161008Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma factor RpoS6e-1891.3
NC_014150:233194:241288241288242106819Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG8e-1890.9
NC_003228:3212500:321592932159293216789861Bacteroides fragilis NCTC 9343, complete genomeputative sigma factor A8e-1890.9
NC_014355:399938:4011424011424024011260Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma-70 factor9e-1890.9
NC_009482:87193:958219582196795975Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-1790.5
NC_007298:778723:816228816228816974747Dechloromonas aromatica RCB, complete genomeSigma-70 region 41e-1790.1
NC_007413:1405817:1426867142686714281171251Anabaena variabilis ATCC 29413, complete genomeRNA polymerase sigma-like factor1e-1790.1
NC_017243:1499757:151441615144161515243828Brachyspira intermedia PWS/A chromosome, complete genomeRNA polymerase sigma factor WhiG2e-1789.7
NC_009850:1011293:1014453101445310163331881Arcobacter butzleri RM4018, complete genomeRNA polymerase sigma 70 factor2e-1789.4
NC_012225:377441:389172389172389999828Brachyspira hyodysenteriae WA1, complete genomeRNA polymerase sigma factor WhiG2e-1789.4
NC_017297:2531750:256721125672112567762552Clostridium botulinum F str. 230613 chromosome, complete genomesigma-70 family RNA polymerase sigma factor4e-1789
NC_009699:2552195:256707225670722567623552Clostridium botulinum F str. Langeland chromosome, complete genomesigma-70 family RNA polymerase sigma factor4e-1789
NC_015714:768500:770767770767771555789Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeDNA-directed RNA polymerase sigma subunit WhiG5e-1788.6
NC_016842:775368:777472777472778260789Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG5e-1788.6
NC_016843:775371:777659777659778447789Treponema pallidum subsp. pertenue str. Gauthier chromosome,DNA-directed RNA polymerase sigma subunit WhiG5e-1788.6
NC_016848:775822:777926777926778714789Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG5e-1788.6
NC_010673:703816:7554327554327573241893Borrelia hermsii DAH, complete genomeRNA polymerase sigma factor RpoD4e-1788.6
NC_008710:703740:7526687526687545601893Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoD5e-1788.2
NC_014328:1135854:115073211507321151457726Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon FliA6e-1788.2
NC_006177:3192500:320519732051973205958762Symbiobacterium thermophilum IAM 14863, complete genomeRNA polymerase sigma factor related to flagellar biosynthesis6e-1788.2
NC_015164:325212:344338344338345198861Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily8e-1787.8
NC_016844:775334:777826777826778614789Treponema pallidum subsp. pallidum DAL-1 chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG7e-1787.8
NC_017268:775000:777138777138777926789Treponema pallidum subsp. pallidum str. Chicago chromosome,RNA polymerase sigma factor WhiG7e-1787.8
NC_021508:775264:777368777368778156789Treponema pallidum subsp. pallidum SS14, complete genomeDNA-directed RNA polymerase sigma subunit WhiG7e-1787.8
NC_013192:1993718:1993718199371819948961179Leptotrichia buccalis DSM 1135, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-1787.8
NC_012917:2921932:292819629281962928918723Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG6e-1787.8
NC_007410:112074:126026126026126970945Anabaena variabilis ATCC 29413 plasmid A, complete sequenceSigma-706e-1787.8
NC_013961:851044:852228852228853220993Erwinia amylovora, complete genomeRNA polymerase sigma factor rpoS1e-1687.4
NC_014562:2563466:260248826024882603480993Pantoea vagans C9-1 chromosome, complete genomeRNA polymerase sigma factor rpoD1e-1687.4
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)1e-1687
NC_013515:550464:5673445673445684831140Streptobacillus moniliformis DSM 12112, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1687
NC_010694:2971170:299977329997733000765993Erwinia tasmaniensis, complete genomeRNA polymerase sigma factor RpoS1e-1687
NC_013956:2523955:252451025245102525232723Pantoea ananatis LMG 20103 chromosome, complete genomeFliA1e-1687
NC_016816:1912366:194426019442601944982723Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor for flagellar operon1e-1687
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor1e-1687
NC_009614:3476000:349491834949183495778861Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase sigma factor rpoD1e-1687
NC_000919:773784:775888775888776676789Treponema pallidum subsp. pallidum str. Nichols, complete genomesigma factor WhiG1e-1687
NC_010741:775000:777336777336778124789Treponema pallidum subsp. pallidum SS14, complete genomeRNA polymerase sigma-28 factor1e-1687
NC_013940:110340:117614117614118381768Deferribacter desulfuricans SSM1 megaplasmid pDF308, completeRNA polymerase, sigma 28 subunit, FliA/WhiG family2e-1686.7
NC_012918:2758775:279005027900502791027978Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit2e-1686.7
NC_016818:749673:750744750744751730987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRNA polymerase sigma factor RpoS2e-1686.3
NC_016799:1439000:147027314702731471262990Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor B2e-1686.3
NC_011244:746801:7669497669497688411893Borrelia recurrentis A1, complete genomeRNA polymerase sigma factor RpoD2e-1685.9
NC_010003:795355:8370528370528382961245Petrotoga mobilis SJ95, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-1685.9
NC_020291:4903981:491882649188264919557732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma factor for flagellar operon3e-1685.9
NC_015222:1127675:112857711285771129293717Nitrosomonas sp. AL212 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG3e-1685.5
NC_014377:1089894:109924110992411099978738Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily3e-1685.5
NC_012563:2680246:269292326929232693474552Clostridium botulinum A2 str. Kyoto, complete genomeRNA polymerase sigma factor, sigma-70 family4e-1685.5
NC_014962:4479989:449534144953414496174834Isosphaera pallida ATCC 43644 chromosome, complete genomeRNA polymerase sigma-38 subunit RpoS4e-1685.1
NC_021182:2883716:289082828908282891553726Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, FliA/WhiG family6e-1684.7
NC_012751:1538500:1553846155384615548531008Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA polymerase, sigma S (sigma 38) factor7e-1684.3
NC_009074:94000:1169431169431183911449Burkholderia pseudomallei 668 chromosome I, complete sequenceRNA polymerase sigma factor RpoD7e-1684.3
NC_008800:2695977:271399427139942714716723Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar biosynthesis sigma factor8e-1684.3
NC_015224:2017781:203906520390652039787723Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar biosynthesis sigma factor8e-1684.3
NC_007759:1356439:136476413647641365549786Syntrophus aciditrophicus SB, complete genomeRNA polymerase flagellar sigma factor9e-1684.3
NC_007516:2383097:2407948240794824090811134Synechococcus sp. CC9605, complete genomepossible type II alternative RNA polymerase sigma factor9e-1684
NC_019748:4129500:4144777414477741460271251Stanieria cyanosphaera PCC 7437, complete genomeRNA polymerase, sigma subunit, RpsC/SigC1e-1583.6
NC_009483:3024115:3042895304289530439051011Geobacter uraniireducens Rf4 chromosome, complete genomeRpoD family RNA polymerase sigma factor1e-1583.6
NC_012778:841934:853378853378854136759Eubacterium eligens ATCC 27750, complete genomephosphatidylserine decarboxylase1e-1583.6
NC_017095:166896:191492191492192247756Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG1e-1583.6
NC_009482:2109270:2130734213073421318461113Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-1583.2
NC_021177:6127431:614515861451586145994837Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor WhiG2e-1583.2
NC_009654:3849774:387059938705993871336738Marinomonas sp. MWYL1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG3e-1582.8
NC_013517:3082279:3083339308333930845021164Sebaldella termitidis ATCC 33386, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1582.8
NC_011661:1332309:1332309133230913335501242Dictyoglomus turgidum DSM 6724, complete genomeputative RNA polymerase, sigma 70 family subunit3e-1582.4
NC_009348:381752:391444391444392151708Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafS4e-1582
NC_010572:2216309:221630922163092217145837Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative RNA polymerase sigma factor WhiG4e-1582
NC_005125:182701:1947391947391958091071Gloeobacter violaceus PCC 7421, complete genomegroup 2 sigma 70-type sigma factor4e-1582
NC_003888:6103534:612104361210436121885843Streptomyces coelicolor A3(2), complete genomesigma factor WhiG4e-1582
NC_010001:3266561:327511932751193275883765Clostridium phytofermentans ISDg, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG6e-1581.6
NC_012918:1814000:1815755181575518167561002Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit5e-1581.6
NC_012779:2281700:229874322987432299465723Edwardsiella ictaluri 93-146, complete genomeRNA polymerase sigma factor for flagellar operon1e-1480.9
NC_010118:207843:2067912067912078461056Candidatus Sulcia muelleri GWSS, complete genomeRNA polymerase sigma factor rpoD9e-1580.9
NC_011146:3089297:3106852310685231078531002Geobacter bemidjiensis Bem, complete genomeRNA polymerase, sigma 70 subunit, RpoD family9e-1580.9
NC_000911:1284552:1301671130167113027801110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor8e-1580.9
NC_017039:1283732:1300698130069813018071110Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeRNA polymerase sigma factor8e-1580.9
NC_017052:1283720:1300686130068613017951110Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeRNA polymerase sigma factor8e-1580.9
NC_017277:1283477:1300488130048813015971110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor8e-1580.9
NC_008820:2595500:2614605261460526157351131Prochlorococcus marinus str. MIT 9303, complete genomePutative type II alternative RNA polymerase sigma factor8e-1580.9
NC_016894:2931213:293121329312132932046834Acetobacterium woodii DSM 1030 chromosome, complete genomeRNA polymerase, sigma 28 subunit FliA1e-1480.5
NC_012806:105133:1119901119901135911602Mycoplasma conjunctivae, complete genomeRNA polymerase sigma factor2e-1479.7
NC_012559:731859:747206747206747949744Laribacter hongkongensis HLHK9, complete genomeFliA12e-1479.7
NC_015496:2155816:215908021590802159943864Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1479.3
NC_011761:2067695:208789920878992088756858Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigm-70 factor family4e-1479
NC_008346:983816:996574996574997356783Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeputative RNA polymerase sigma factor3e-1479
NC_015638:591964:593277593277594140864Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit3e-1479
NC_007651:72952:9341493414948651452Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma factor RpoD4e-1478.6
NC_016510:871000:877846877846878709864Flavobacterium columnare ATCC 49512 chromosome, complete genomeRpoD family RNA polymerase sigma factor5e-1478.6
NC_014448:487381:5041035041035056771575Mycoplasma hyorhinis HUB-1 chromosome, complete genomeRNA polymerase sigma factor5e-1478.2
NC_014761:1321187:1321187132118713226411455Oceanithermus profundus DSM 14977 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily7e-1477.8
NC_007498:1666242:1677244167724416782871044Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, sigma 70/sigma 32 subunit8e-1477.8
NC_006322:2658587:266257426625742663299726Bacillus licheniformis ATCC 14580, complete genomeSpoIIIC1e-1377.4
NC_006270:2657726:266171326617132662438726Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sporulation-specific sigma factor (sigma-K) (C-terminal half)1e-1377.4
NC_015167:724934:728042728042728905864Cellulophaga lytica DSM 7489 chromosome, complete genomeRpoD subfamily RNA polymerase sigma 70 subunit1e-1377.4
NC_009828:600349:632038632038632748711Thermotoga lettingae TMO, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG1e-1377.4
NC_014220:837926:841866841866842591726Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-1377
NC_016047:2631511:263408426340842634812729Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeRNA polymerase sigma-K factor2e-1376.6
NC_014479:2505823:250902725090272509755729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completesporulation sigma factor SigmaK2e-1376.6
NC_017195:2498113:250061925006192501347729Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-K factor2e-1376.6
NC_014932:1387818:138931913893191390230912Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma-32 factor2e-1376.6
NC_009930:152500:1724641724641737471284Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencehypothetical protein2e-1376.3
NC_007517:1561466:158865115886511589631981Geobacter metallireducens GS-15, complete genomesigma 28 (Flagella/Sporulation)2e-1376.3
NC_011386:136223:1551691551691563321164Oligotropha carboxidovorans OM5, complete genomeRNA polymerase sigma factor RpoD3e-1375.9
NC_015684:362236:3723743723743735401167Oligotropha carboxidovorans OM5 chromosome, complete genome3e-1375.9
NC_009138:1843998:1860878186087818633042427Herminiimonas arsenicoxydans, complete genome3e-1375.9
NC_020291:1389114:139256713925671393274708Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-E factor SigE4e-1375.5
NC_017191:2514401:251805925180592518787729Bacillus amyloliquefaciens XH7 chromosome, complete genomesporulation sigma factor SigK4e-1375.5
NC_017188:2512357:251601825160182516743726Bacillus amyloliquefaciens TA208 chromosome, complete genomesporulation sigma factor SigK4e-1375.5
UCMB5137:2054735:206023320602332060961729Bacillus atrophaeus UCMB-5137sporulation sigma factor SigK3e-1375.5
CP002207:2169277:217149621714962172224729Bacillus atrophaeus 1942, complete genomesporulation sigma factor SigK3e-1375.5
NC_014639:2169277:217149621714962172224729Bacillus atrophaeus 1942 chromosome, complete genomesporulation sigma factor SigK3e-1375.5
NC_014551:2510000:251515725151572515879723Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sporulation-specific sigma-K factor precursor (Sigma-27) (C-terminal fragment)3e-1375.5
NC_020272:1384525:140054414005441401266723Bacillus amyloliquefaciens IT-45, complete genomesporulation sigma factor SigK3e-1375.5
NC_009725:2517428:252185025218502522572723Bacillus amyloliquefaciens FZB42, complete genomeSpoIIIC3e-1375.5
NC_020410:2509057:251185125118512512573723Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-K factor3e-1375.5
NC_008312:6801445:6821260682126068224141155Trichodesmium erythraeum IMS101, complete genomeRNA polymerase, sigma 28 subunit4e-1375.1
NC_020911:2921925:295782329578232958542720Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma factor for flagellar operon5e-1375.1
NC_014330:2457731:245868224586822459626945Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor RpoD7e-1374.7
NC_019908:748635:781082781082782008927Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor RpoD8e-1374.3
NC_018604:1385788:138578813857881386714927Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor RpoD8e-1374.3
NC_018607:1185195:118614611861461187072927Brachyspira pilosicoli B2904 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit8e-1374.3
NC_008686:2080770:2085415208541520876012187Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRNA polymerase, sigma 32 subunit, RpoH1e-1273.6
NC_014393:4352216:4355487435548743567701284Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH2e-1273.6
NC_019940:293476:307389307389308144756Thioflavicoccus mobilis 8321 chromosome, complete genomeFliA/WhiG family RNA polymerase sigma factor2e-1273.6
NC_008710:819389:820347820347821150804Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoS2e-1273.2
NC_015138:5046921:5053585505358550562212637Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit4e-1272
NC_015557:905145:906509906509907246738Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-1272
NC_015587:905255:906619906619907356738Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-1272
NC_020411:905335:906699906699907436738Hydrogenobaculum sp. HO, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG5e-1272
NC_007644:1603696:161628816162881616968681Moorella thermoacetica ATCC 39073, complete genomesigma 28 (Flagella/Sporulation)1e-1170.5
NC_013894:1380564:140102114010211401953933Thermocrinis albus DSM 14484 chromosome, complete genomeputative RNA polymerase, sigma 70 family subunit1e-1170.5
NC_020409:168916:180363180363181148786Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRNA polymerase sigma factor for flagellar operon1e-1170.5
NC_009664:570768:581858581858582718861Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-1170.1
NC_011662:1160887:116325211632521164103852Thauera sp. MZ1T, complete genomeRNA polymerase, sigma 32 subunit, RpoH2e-1170.1
NC_014330:697429:713067713067713921855Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA directed RNA polymerase sigma subunit2e-1169.7
NC_019908:2496149:250468525046852505539855Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA directed RNA polymerase sigma subunit2e-1169.7
NC_009512:1691930:171188917118891712629741Pseudomonas putida F1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-1169.3
NC_002947:4931476:493147649314764932216741Pseudomonas putida KT2440, complete genomeflagellar biosynthesis sigma factor FliA2e-1169.3
NC_011969:3627980:365406836540683654787720Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sige2e-1169.3
NC_017986:4374979:439493843949384395678741Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis sigma factor2e-1169.3
NC_007404:359764:363361363361364206846Thiobacillus denitrificans ATCC 25259, complete genomesigma-70 factor2e-1169.3
NC_017208:694500:706239706239706970732Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesporulation sigma factor SigF3e-1168.9
NC_008346:584305:613841613841614575735Syntrophomonas wolfei subsp. wolfei str. Goettingen, completesigma 28 (flagella/sporulation)3e-1168.9
NC_011126:922182:921448921448922185738Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG4e-1168.9
NC_008601:1151653:115361411536141154492879Francisella tularensis subsp. novicida U112, complete genomeRNA polymerase sigma-32 factor6e-1168.2
NC_007298:2689731:271902027190202719949930Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma factor6e-1168.2
NC_010501:4080937:408141640814164082156741Pseudomonas putida W619, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG8e-1167.8
NC_020911:349610:353922353922354782861Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma 32 factor RpoH1e-1067
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor2e-1066.2
NC_009445:1453132:145613414561341457033900Bradyrhizobium sp. ORS 278 chromosome, complete genomeRNA polymerase factor sigma-323e-1065.9
NC_004129:1848701:187106618710661871806741Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis sigma factor FliA5e-1065.1
NC_017262:623351:625601625601626509909Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeRNA polymerase sigma-32 subunit RpoH5e-1065.1
NC_007492:1735595:175314617531461753886741Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis sigma factor FliA5e-1065.1
NC_012440:659646:677627677627678256630Persephonella marina EX-H1, complete genomeRNA polymerase sigma factor for flagellar operon4e-1065.1
NC_010725:4618000:462237446223744623246873Methylobacterium populi BJ001, complete genomeRNA polymerase, sigma 32 subunit, RpoH6e-1064.7
NC_010172:1079127:107912710791271080020894Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor RpoH6e-1064.7
NC_009523:2769154:2779011277901127802071197Roseiflexus sp. RS-1 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH7e-1064.7
NC_014366:2393702:239507623950762395933858Gamma proteobacterium HdN1, complete genomeRNA polymerase sigma factor9e-1064.3
NC_013093:2599591:261118526111852612069885Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily9e-1064.3
NC_008783:119758:141073141073141984912Bartonella bacilliformis KC583, complete genomeRNA polymerase sigma-32 factor8e-1064.3
NC_014623:4535544:457504845750484575938891Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma-b factor1e-0963.9
NC_012779:3570720:358928535892853590139855Edwardsiella ictaluri 93-146, complete genomealternative sigma factor RpoH, putative1e-0963.9
NC_009485:7021228:704376170437617044660900Bradyrhizobium sp. BTAi1 chromosome, complete genomeRNA polymerase factor sigma-321e-0963.5
NC_014328:1307490:132611813261181326819702Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative RNA polymerase sigma-K factor3e-0962.8
NC_011653:1728000:174502817450281745708681Thermosipho africanus TCF52B, complete genomeRNA polymerase sigma factor for flagellar operon2e-0962.8
NC_010505:5967324:597047859704785971371894Methylobacterium radiotolerans JCM 2831, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-0962.4
NC_021184:2238500:225056522505652251368804Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, FliA/WhiG family4e-0962
NC_013960:2261487:227817022781702279033864Nitrosococcus halophilus Nc4 chromosome, complete genomeRNA polymerase sigma factor RpoH5e-0962
NC_007946:3855445:386624838662483867102855Escherichia coli UTI89, complete genomecomponent of RNA polymerase, sigma 32 factor5e-0961.6
NC_008563:3888232:389904338990433899897855Escherichia coli APEC O1, complete genomeRNA polymerase sigma factor5e-0961.6
NC_011742:3799788:381378338137833814637855Escherichia coli S88 chromosome, complete genomeRNA polymerase factor sigma-325e-0961.6
NC_019842:2575000:257786225778622578509648Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,sporulation sigma factor SigK5e-0961.6
NC_007760:1415663:141749914174991418467969Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma 32 (RpoH)1e-0860.5
NC_006831:664000:666015666015666974960Ehrlichia ruminantium str. Gardel, complete genomeRNA polymerase sigma-32 factor1e-0860.5
NC_011891:3004000:301729530172953018263969Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH1e-0860.5
NC_006832:668913:670354670354671316963Ehrlichia ruminantium str. Welgevonden, complete genomeRNA polymerase sigma-32 factor1e-0860.1
NC_016148:576946:580786580786581376591Thermovirga lienii DSM 17291 chromosome, complete genomeFliA/WhiG subfamily RNA polymerase sigma-28 subunit2e-0860.1
NC_017249:2073558:207916620791662080077912Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0859.7
NC_005295:689500:690509690509691399891Ehrlichia ruminantium str. Welgevonden, complete genomeRNA polymerase sigma-32 factor2e-0859.7
NC_015391:2059191:207239420723942073110717Carnobacterium sp. 17-4 chromosome, complete genomeRNA polymerase sigma factor SigD2e-0859.3
NC_014976:627935:631089631089631556468Bacillus subtilis BSn5 chromosome, complete genomesporulation sigma factor SigK3e-0858.9
NC_016641:3217201:323056832305683231518951Paenibacillus terrae HPL-003 chromosome, complete genomeRNA polymerase sigma factor4e-0858.9
NC_009929:3923:2255322553238751323Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma factor5e-0858.5
NC_014721:2135500:214805921480592148679621Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeRNA polymerase, sigma 70 family subunit5e-0858.5
NC_003902:2211790:222997722299772230744768Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor9e-0857.8
NC_010688:2532929:255433425543342555101768Xanthomonas campestris pv. campestris, complete genomeRNA polymerase sigma factor rpoD (Sigma-70).9e-0857.8
NC_013009:270000:291112291112291978867Neorickettsia risticii str. Illinois, complete genomeRNA polymerase sigma-32 factor (RpoH)1e-0757.4
NC_014172:53815:697826978270753972Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequenceRNA polymerase sigma-43 factor1e-0757.4
NC_010002:1879220:188397618839761884920945Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH1e-0757.4
NC_014313:2059933:206294420629442063834891Hyphomicrobium denitrificans ATCC 51888 chromosome, completeRNA polymerase, sigma 32 subunit, RpoH1e-0757
NC_010516:2676746:271203727120372712471435Clostridium botulinum B1 str. Okra, complete genomeRNA polymerase sigma-K factor1e-0757
NC_009674:2678932:270344827034482704176729Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeFliA/WhiG family RNA polymerase sigma factor1e-0757
NC_005303:780557:799001799001799687687Onion yellows phytoplasma OY-M, complete genomeDNA-directed RNA polymerase specialized sigma subunit2e-0756.6
NC_008346:584305:589147589147589527381Syntrophomonas wolfei subsp. wolfei str. Goettingen, completesigma 28 (flagella/sporulation)3e-0756.2
NC_007508:2234080:225143322514332252200768Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor for flagellar operon FliA3e-0755.8
NC_011365:502620:519355519355520242888Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRNA polymerase factor sigma-323e-0755.8
NC_014311:1:77257725104482724Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor3e-0755.8
NC_017267:2326443:234651123465112347278768Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeRNA polymerase sigma factor3e-0755.8
NC_003919:2233000:225816622581662258933768Xanthomonas axonopodis pv. citri str. 306, complete genomeRNA polymerase sigma factor3e-0755.8
NC_009932:39348:5824858248595191272Acaryochloris marina MBIC11017 plasmid pREB7, complete sequenceRNA polymerase sigma-24 subunit3e-0755.8
NC_007103:198500:211335211335212306972Bacillus cereus E33L plasmid pE33L466, complete sequenceRNA polymerase sigma factor (sigma-A) (sigma-43)4e-0755.5
NC_007798:260324:279854279854280720867Neorickettsia sennetsu str. Miyayama, complete genomeRNA polymerase sigma-32 factor6e-0755.1
NC_007716:225535:242894242894243499606Aster yellows witches'-broom phytoplasma AYWB, complete genomeRNA polymerase sigma factor6e-0755.1
NC_010125:2295500:231102723110272312004978Gluconacetobacter diazotrophicus PAl 5, complete genomeputative RNA polymerase sigma-32 factor5e-0755.1
NC_015687:2145452:216033421603342161074741Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA-dependent RNA polymerase sigma subunit6e-0754.7
NC_015573:1979202:198377519837751984194420Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeFliA/WhiG subfamily RNA polymerase sigma-28 subunit8e-0754.3
NC_004545:15650:266692666927532864Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor3e-0652.4
NC_015581:1791658:179242117924211793278858Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH4e-0652
NC_010742:1595065:161634716163471617258912Brucella abortus S19 chromosome 1, complete sequenceSigma-70 factor family5e-0651.6
NC_006932:1596732:161801416180141618925912Brucella abortus biovar 1 str. 9-941 chromosome I, completeRNA polymerase sigma factor5e-0651.6
NC_007618:1593886:161517016151701616081912Brucella melitensis biovar Abortus 2308 chromosome I, completeSigma-70 factor family:Sigma-70 region 2:Sigma-70 region 45e-0651.6
NC_010103:1577750:159903115990311599942912Brucella canis ATCC 23365 chromosome I, complete sequencealternative sigma factor RpoH5e-0651.6
NC_015857:1609670:163095016309501631861912Brucella pinnipedialis B2/94 chromosome chromosome 1, completeRNA polymerase factor sigma-325e-0651.6
NC_004310:1578918:160019816001981601109912Brucella suis 1330 chromosome I, complete sequenceRNA polymerase sigma factor5e-0651.6
NC_019978:2036779:205421120542112054906696Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma-K factor7e-0651.2
NC_009930:152500:1650481650481664781431Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma factor domain protein9e-0650.8