Pre_GI: BLASTN Hits

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Query: NC_008595:5168941 Mycobacterium avium 104, complete genome

Start: 5168941, End: 5213599, Length: 44659

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome02811BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome02811BLASTN svgBLASTP svg
NC_008595:17923181792318181084718530Mycobacterium avium 104, complete genome02809BLASTN svgBLASTP svg
NC_008595:26610192661019268240621388Mycobacterium avium 104, complete genome02807BLASTN svgBLASTP svg
NC_008595:19518871951887197059018704Mycobacterium avium 104, complete genome02807BLASTN svgBLASTP svg
NC_008595:31286131286133836925509Mycobacterium avium 104, complete genome02805BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome02793BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome02791BLASTN svgBLASTP svg
NC_008595:18445001844500186548520986Mycobacterium avium 104, complete genome02789BLASTN svgBLASTP svg
NC_008595:18692841869284189175722474Mycobacterium avium 104, complete genome02040BLASTN svgBLASTP svg
NC_008595:22528302252830227372020891Mycobacterium avium 104, complete genome02038BLASTN svgBLASTP svg
NC_008726:61000061000062882018821Mycobacterium vanbaalenii PYR-1, complete genome01390BLASTN svgBLASTP svg
NC_008146:1016446*1016446104459328148Mycobacterium sp. MCS, complete genome01346BLASTN svgBLASTP svg
NC_008146:27446122744612277451129900Mycobacterium sp. MCS, complete genome01346BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome01346BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome01346BLASTN svgBLASTP svg
NC_008705:27631312763131279239929269Mycobacterium sp. KMS, complete genome01346BLASTN svgBLASTP svg
NC_015576:39766793976679403475658078Mycobacterium sp. JDM601 chromosome, complete genome0989BLASTN svgBLASTP svg
NC_002944:865425*86542589916033736Mycobacterium avium subsp. paratuberculosis K-10, complete genome0942BLASTN svgBLASTP svg
NC_002944:990009900011707318074Mycobacterium avium subsp. paratuberculosis K-10, complete genome0938BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome0938BLASTN svgBLASTP svg
NC_002944:23738732373873239934625474Mycobacterium avium subsp. paratuberculosis K-10, complete genome0930BLASTN svgBLASTP svg
NC_008726:63359616335961637742441464Mycobacterium vanbaalenii PYR-1, complete genome4e-176626BLASTN svgBLASTP svg
NC_008595:52344675234467525314218676Mycobacterium avium 104, complete genome1e-160575BLASTN svgBLASTP svg
NC_008595:26872452687245272814940905Mycobacterium avium 104, complete genome1e-160575BLASTN svgBLASTP svg
NC_008595:66150766150768418722681Mycobacterium avium 104, complete genome5e-151543BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome4e-102381BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome4e-102381BLASTN svgBLASTP svg
NC_013757:30121303012130303570423575Geodermatophilus obscurus DSM 43160, complete genome4e-102381BLASTN svgBLASTP svg
NC_013757:36897336897341230243330Geodermatophilus obscurus DSM 43160, complete genome4e-102381BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome6e-92347BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome6e-92347BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome6e-92347BLASTN svgBLASTP svg
NC_015312:63989316398931641727718347Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-64256BLASTN svgBLASTP svg
NC_014814:43265004326500435109924600Mycobacterium sp. Spyr1 chromosome, complete genome9e-51210BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-40176BLASTN svgBLASTP svg
NC_014215:14250014250016776025261Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-34157BLASTN svgBLASTP svg
NC_014215:22592902259290228320523916Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-34157BLASTN svgBLASTP svg
NC_014666:19696021969602199407424473Frankia sp. EuI1c chromosome, complete genome7e-27131BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome1e-25127BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome3e-23119BLASTN svgBLASTP svg
NC_006087:1334500*1334500136229227793Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-18103BLASTN svgBLASTP svg
NC_013510:85699785699787561618620Thermomonospora curvata DSM 43183, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_013743:1450417*1450417147310922693Haloterrigena turkmenica DSM 5511, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_015848:38512303851230387671725488Mycobacterium canettii CIPT 140010059, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_015125:2288487*2288487231248023994Microbacterium testaceum StLB037, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015312:1265797*1265797133663070834Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_009077:87416487416490865534492Mycobacterium sp. JLS, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_013744:25270225270227233119630Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, complete2e-0869.9BLASTN svgBLASTP svg
NC_008596:4104476*4104476413983135356Mycobacterium smegmatis str. MC2 155, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009142:55795635579563561009730535Saccharopolyspora erythraea NRRL 2338, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_012522:26231722623172264298019809Rhodococcus opacus B4, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_012669:83255583255585839125837Beutenbergia cavernae DSM 12333, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_015588:19657871965787198857522789Isoptericola variabilis 225 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_019974:816641*81664184317126531Natronococcus occultus SP4, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015312:67179736717973673763819666Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015312:1893945*1893945191339219448Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_006177:280234*28023431920738974Symbiobacterium thermophilum IAM 14863, complete genome5e-0661.9BLASTN svgBLASTP svg