Pre_GI: BLASTN Hits

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Query: NC_008595:2546696 Mycobacterium avium 104, complete genome

Start: 2546696, End: 2584803, Length: 38108

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008595:26872452687245272814940905Mycobacterium avium 104, complete genome05019BLASTN svgBLASTP svg
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome02920BLASTN svgBLASTP svg
NC_008595:19114911911491193399222502Mycobacterium avium 104, complete genome02918BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome02918BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome02918BLASTN svgBLASTP svg
NC_008595:18445001844500186548520986Mycobacterium avium 104, complete genome02807BLASTN svgBLASTP svg
NC_008595:19518871951887197059018704Mycobacterium avium 104, complete genome02795BLASTN svgBLASTP svg
NC_008595:51689415168941521359944659Mycobacterium avium 104, complete genome02791BLASTN svgBLASTP svg
NC_008595:31286131286133836925509Mycobacterium avium 104, complete genome02791BLASTN svgBLASTP svg
NC_008595:17923181792318181084718530Mycobacterium avium 104, complete genome02789BLASTN svgBLASTP svg
NC_008595:26610192661019268240621388Mycobacterium avium 104, complete genome02789BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome02785BLASTN svgBLASTP svg
NC_014814:85912485912490088141758Mycobacterium sp. Spyr1 chromosome, complete genome01540BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome01536BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome01534BLASTN svgBLASTP svg
NC_008726:61000061000062882018821Mycobacterium vanbaalenii PYR-1, complete genome01382BLASTN svgBLASTP svg
NC_002755:83139783139785005418658Mycobacterium tuberculosis CDC1551, complete genome01281BLASTN svgBLASTP svg
NC_008769:86067086067087969619027Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome01281BLASTN svgBLASTP svg
NC_009525:83051383051384921918707Mycobacterium tuberculosis H37Ra, complete genome01281BLASTN svgBLASTP svg
NC_009565:83307683307685178218707Mycobacterium tuberculosis F11, complete genome01281BLASTN svgBLASTP svg
NC_012207:83103083103085360922580Mycobacterium bovis BCG str. Tokyo 172, complete genome01281BLASTN svgBLASTP svg
NC_002945:83102983102985365622628Mycobacterium bovis AF2122/97, complete genome01273BLASTN svgBLASTP svg
NC_015576:39766793976679403475658078Mycobacterium sp. JDM601 chromosome, complete genome0997BLASTN svgBLASTP svg
NC_002944:990009900011707318074Mycobacterium avium subsp. paratuberculosis K-10, complete genome0955BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome0954BLASTN svgBLASTP svg
NC_002944:865425*86542589916033736Mycobacterium avium subsp. paratuberculosis K-10, complete genome0954BLASTN svgBLASTP svg
NC_002944:23738732373873239934625474Mycobacterium avium subsp. paratuberculosis K-10, complete genome0946BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome4e-173617BLASTN svgBLASTP svg
NC_008146:1016446*1016446104459328148Mycobacterium sp. MCS, complete genome4e-173617BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome2e-104389BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome2e-104389BLASTN svgBLASTP svg
NC_013757:30121303012130303570423575Geodermatophilus obscurus DSM 43160, complete genome2e-104389BLASTN svgBLASTP svg
NC_013757:36897336897341230243330Geodermatophilus obscurus DSM 43160, complete genome2e-104389BLASTN svgBLASTP svg
NC_013441:28421342842134286273320600Gordonia bronchialis DSM 43247, complete genome4e-68268BLASTN svgBLASTP svg
NC_015312:63989316398931641727718347Pseudonocardia dioxanivorans CB1190 chromosome, complete genome6e-67264BLASTN svgBLASTP svg
NC_013235:13259751325975134970523731Nakamurella multipartita DSM 44233, complete genome8e-51210BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_015312:3675148*3675148374606470917Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_015312:2278566*2278566232680848243Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_015312:1265797*1265797133663070834Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_013169:612456*61245664773335278Kytococcus sedentarius DSM 20547, complete genome7e-42180BLASTN svgBLASTP svg
NC_008596:2873675*2873675289516021486Mycobacterium smegmatis str. MC2 155, complete genome2e-32149BLASTN svgBLASTP svg
NC_014159:37920379205903321114Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete2e-26129BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_008595:2432184*2432184245655424371Mycobacterium avium 104, complete genome1e-21113BLASTN svgBLASTP svg
NC_015556:819503*81950384290123399Pseudomonas fulva 12-X chromosome, complete genome5e-21111BLASTN svgBLASTP svg
NC_004463:23441282344128236509920972Bradyrhizobium japonicum USDA 110, complete genome1e-18103BLASTN svgBLASTP svg
NC_006087:1334500*1334500136229227793Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-18103BLASTN svgBLASTP svg
NC_009077:44190844419084444609827015Mycobacterium sp. JLS, complete genome5e-18101BLASTN svgBLASTP svg
NC_007963:26449302644930268018935260Chromohalobacter salexigens DSM 3043, complete genome5e-18101BLASTN svgBLASTP svg
NC_008027:71350071350073434320844Pseudomonas entomophila L48, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012560:13220001322000135714535146Azotobacter vinelandii DJ, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_021150:13220001322000135715735158Azotobacter vinelandii CA6, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011892:35265235265237609923448Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete8e-1797.6BLASTN svgBLASTP svg
NC_005085:14980001498000152157823579Chromobacterium violaceum ATCC 12472, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_002944:41474314147431417353826108Mycobacterium avium subsp. paratuberculosis K-10, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_013757:28583272858327287756419238Geodermatophilus obscurus DSM 43160, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015677:285896*28589630970623811Ramlibacter tataouinensis TTB310 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015711:19141621914162193395819797Myxococcus fulvus HW-1 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008146:17480261748026180688658861Mycobacterium sp. MCS, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008595:18692841869284189175722474Mycobacterium avium 104, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008705:17902221790222183895348732Mycobacterium sp. KMS, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008726:54910254910257820229101Mycobacterium vanbaalenii PYR-1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009077:17256831725683177988554203Mycobacterium sp. JLS, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014814:16937416937419709927726Mycobacterium sp. Spyr1 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_016002:2946702*2946702299376147060Pseudogulbenkiania sp. NH8B, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_015848:38512303851230387671725488Mycobacterium canettii CIPT 140010059, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008149:12216371221637124331521679Yersinia pestis Nepal516, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_004088:12917541291754131420722454Yersinia pestis KIM, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003143:28956172895617291809922483Yersinia pestis CO92, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011992:19122001912200193159919400Acidovorax ebreus TPSY, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010612:52362295236229525609919871Mycobacterium marinum M, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013595:3541012*3541012356209921088Streptosporangium roseum DSM 43021, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015957:3067919*3067919309418126263Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014318:61086336108633613113322501Amycolatopsis mediterranei U32 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010002:40385004038500406476326264Delftia acidovorans SPH-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_006177:280234*28023431920738974Symbiobacterium thermophilum IAM 14863, complete genome4e-0661.9BLASTN svgBLASTP svg