Query: NC_008595:1911491 Mycobacterium avium 104, complete genome
Start: 1911491, End: 1933992, Length: 22502
Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008595:2215244 | 2215244 | 2249735 | 34492 | Mycobacterium avium 104, complete genome | 0 | 2922 | BLASTN svg | BLASTP svg |
NC_008595:1176658 | 1176658 | 1196867 | 20210 | Mycobacterium avium 104, complete genome | 0 | 2920 | BLASTN svg | BLASTP svg |
NC_008595:2687245 | 2687245 | 2728149 | 40905 | Mycobacterium avium 104, complete genome | 0 | 2918 | BLASTN svg | BLASTP svg |
NC_008595:2546696 | 2546696 | 2584803 | 38108 | Mycobacterium avium 104, complete genome | 0 | 2918 | BLASTN svg | BLASTP svg |
NC_008595:1413354 | 1413354 | 1443794 | 30441 | Mycobacterium avium 104, complete genome | 0 | 2918 | BLASTN svg | BLASTP svg |
NC_008595:2661019 | 2661019 | 2682406 | 21388 | Mycobacterium avium 104, complete genome | 0 | 2863 | BLASTN svg | BLASTP svg |
NC_014814:3892000 | 3892000 | 3922426 | 30427 | Mycobacterium sp. Spyr1 chromosome, complete genome | 0 | 1538 | BLASTN svg | BLASTP svg |
NC_014814:859124 | 859124 | 900881 | 41758 | Mycobacterium sp. Spyr1 chromosome, complete genome | 0 | 1534 | BLASTN svg | BLASTP svg |
NC_014814:2588628* | 2588628 | 2647576 | 58949 | Mycobacterium sp. Spyr1 chromosome, complete genome | 0 | 1534 | BLASTN svg | BLASTP svg |
NC_008146:1016446* | 1016446 | 1044593 | 28148 | Mycobacterium sp. MCS, complete genome | 5e-174 | 618 | BLASTN svg | BLASTP svg |
NC_008146:861319 | 861319 | 944146 | 82828 | Mycobacterium sp. MCS, complete genome | 2e-173 | 617 | BLASTN svg | BLASTP svg |
NC_013169:612456* | 612456 | 647733 | 35278 | Kytococcus sedentarius DSM 20547, complete genome | 4e-42 | 180 | BLASTN svg | BLASTP svg |
NC_008596:2873675* | 2873675 | 2895160 | 21486 | Mycobacterium smegmatis str. MC2 155, complete genome | 1e-32 | 149 | BLASTN svg | BLASTP svg |
NC_012522:7763426 | 7763426 | 7786801 | 23376 | Rhodococcus opacus B4, complete genome | 4e-30 | 141 | BLASTN svg | BLASTP svg |
NC_014159:37920 | 37920 | 59033 | 21114 | Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_014158:233733 | 233733 | 327711 | 93979 | Tsukamurella paurometabola DSM 20162 chromosome, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_015656:1653450 | 1653450 | 1680622 | 27173 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_009921:4035225* | 4035225 | 4073876 | 38652 | Frankia sp. EAN1pec, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_015957:7249873 | 7249873 | 7272381 | 22509 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009921:3551036* | 3551036 | 3622359 | 71324 | Frankia sp. EAN1pec, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008726:925895 | 925895 | 948099 | 22205 | Mycobacterium vanbaalenii PYR-1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013858:416000* | 416000 | 453099 | 37100 | Azospirillum sp. B510 plasmid pAB510d, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015957:3067919* | 3067919 | 3094181 | 26263 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014318:6108633 | 6108633 | 6131133 | 22501 | Amycolatopsis mediterranei U32 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015957:8677395* | 8677395 | 8707779 | 30385 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009921:3854969 | 3854969 | 3891481 | 36513 | Frankia sp. EAN1pec, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_003888:3817000 | 3817000 | 3854645 | 37646 | Streptomyces coelicolor A3(2), complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |