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Query: NC_008595:1869284 Mycobacterium avium 104, complete genome

Start: 1869284, End: 1891757, Length: 22474

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008595:22528302252830227372020891Mycobacterium avium 104, complete genome02670BLASTN svgBLASTP svg
NC_008595:51689415168941521359944659Mycobacterium avium 104, complete genome02040BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome01737BLASTN svgBLASTP svg
NC_008705:27631312763131279239929269Mycobacterium sp. KMS, complete genome01356BLASTN svgBLASTP svg
NC_008146:27446122744612277451129900Mycobacterium sp. MCS, complete genome01356BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome01354BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome01354BLASTN svgBLASTP svg
NC_008146:1016446*1016446104459328148Mycobacterium sp. MCS, complete genome01354BLASTN svgBLASTP svg
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome0763BLASTN svgBLASTP svg
NC_008726:63359616335961637742441464Mycobacterium vanbaalenii PYR-1, complete genome2e-161577BLASTN svgBLASTP svg
NC_008595:52344675234467525314218676Mycobacterium avium 104, complete genome4e-122446BLASTN svgBLASTP svg
NC_008595:26872452687245272814940905Mycobacterium avium 104, complete genome1e-119438BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome3e-114420BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome3e-92347BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome3e-92347BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome3e-92347BLASTN svgBLASTP svg
NC_008595:66150766150768418722681Mycobacterium avium 104, complete genome4e-85323BLASTN svgBLASTP svg
NC_014814:43265004326500435109924600Mycobacterium sp. Spyr1 chromosome, complete genome5e-57230BLASTN svgBLASTP svg
NC_012522:78370717837071785964122571Rhodococcus opacus B4, complete genome4e-39170BLASTN svgBLASTP svg
NC_014215:22592902259290228320523916Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-32149BLASTN svgBLASTP svg
NC_014215:14250014250016776025261Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-32149BLASTN svgBLASTP svg
NC_018581:3202281*3202281322702624746Gordonia sp. KTR9 chromosome, complete genome6e-29137BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome3e-21111BLASTN svgBLASTP svg
NC_008726:92589592589594809922205Mycobacterium vanbaalenii PYR-1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_019673:1420198*1420198144786527668Saccharothrix espanaensis DSM 44229 complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015953:25121522512152253676224611Streptomyces sp. SirexAA-E chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006513:27082132708213273362325411Azoarcus sp. EbN1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019673:1988853*1988853204493756085Saccharothrix espanaensis DSM 44229 complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013131:8480384*8480384852686646483Catenulispora acidiphila DSM 44928, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018581:32537313253731327470920979Gordonia sp. KTR9 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008278:14727091472709149653023822Frankia alni ACN14a, complete genome3e-0661.9BLASTN svgBLASTP svg