Pre_GI: BLASTP Hits

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Query: NC_008595:2687245:2724520 Mycobacterium avium 104, complete genome

Start: 2724520, End: 2725242, Length: 723

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002944:1881405:188923018892301889952723Mycobacterium avium subsp. paratuberculosis K-10, complete genomeYfnB4e-135480
NC_009484:1627734:164852316485231649230708Acidiphilium cryptum JF-5 chromosome, complete genomehaloacid dehalogenase1e-40166
NC_015186:1698000:171878517187851719492708Acidiphilium multivorum AIU301, complete genomeputative epoxide hydrolase1e-40166
NC_003155:883500:887698887698888492795Streptomyces avermitilis MA-4680, complete genome2-haloalkanoic acid dehalogenase2e-24112
NC_010557:679656:718813718813719517705Burkholderia ambifaria MC40-6 chromosome 3, complete sequencehaloacid dehalogenase, type II1e-1686.3
NC_008392:1029134:105038510503851051089705Burkholderia cepacia AMMD chromosome 3, complete sequencehaloacid dehalogenase, type II2e-1685.9
NC_015145:1107500:110952011095201109843324Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome3e-1479
NC_012108:3922511:392624439262443926930687Desulfobacterium autotrophicum HRM2, complete genomeputative (S)-2-haloacid dehalogenase (2-haloalkanoic acid dehalogenase) (L-2-haloacid dehalogenase) (DEHC)1e-1170.1
NC_018665:2563375:256982725698272570492666Exiguobacterium antarcticum B7 chromosome, complete genomeHaloacid dehalogenase, type II1e-1066.6
NC_009659:997779:101898710189871019685699Janthinobacterium sp. Marseille chromosome, complete genome(S)-2-haloacid dehalogenase2e-1066.2
NC_010556:2773396:278003227800322780697666Exiguobacterium sibiricum 255-15, complete genomehaloacid dehalogenase, type II6e-1064.3
NC_014537:453644:466830466830467459630Vulcanisaeta distributa DSM 14429 chromosome, complete genomehaloacid dehalogenase, type II8e-1063.9
NC_010524:4644587:466610146661014666820720Leptothrix cholodnii SP-6, complete genomehaloacid dehalogenase, type II3e-0962.4
NC_009138:668000:668530668530669228699Herminiimonas arsenicoxydans, complete genome(S)-2-haloacid dehalogenase (2-haloalkanoic acid dehalogenase) (L-2-haloacid dehalogenase) (Halocarboxylic acid halidohydrolase)4e-0961.6
NC_005773:5684000:569736456973645698032669Pseudomonas syringae pv. phaseolicola 1448A, complete genomehaloacid dehalogenase, type II5e-0961.6
NC_015658:319296:334089334089334775687Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequencehaloacid dehalogenase, type II3e-0858.9
NC_008596:4104476:413137541313754132064690Mycobacterium smegmatis str. MC2 155, complete genomehaloacid dehalogenase, type II4e-0858.5
NC_009921:1813500:181885018188501819539690Frankia sp. EAN1pec, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 31e-0653.9
NC_009380:2253500:226026222602622260909648Salinispora tropica CNB-440 chromosome, complete genomeHAD family hydrolase1e-0653.5